| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027628 |
Definition |
Propionibacterium phage Lauchelly, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus. |
DB of origin |
REFSEQ |
Length |
29517 |
Host Name |
Propionibacterium acnes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
53.86 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009160231.1 | NC_027628_p43 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26617 | 26925 |
| YP_009160220.1 | NC_027628_p32 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 21575 | 21931 |
| YP_009160226.1 | NC_027628_p38 | hypothetical protein | phrog_4216 | unknown function | unknown function | -1 | 25090 | 25173 |
| YP_009160233.1 | NC_027628_p45 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 29153 | 29455 |
| YP_009160227.1 | NC_027628_p39 | hypothetical protein | phrog_1937 | unknown function | unknown function | -1 | 25170 | 25373 |
| YP_009160216.1 | NC_027628_p28 | hypothetical protein | phrog_2548 | unknown function | unknown function | -1 | 19541 | 20098 |
| YP_009160201.1 | NC_027628_p13 | tail assembly chaperone | phrog_1927 | tail assembly chaperone | tail | 1 | 7822 | 8118 |
| YP_009160219.1 | NC_027628_p31 | DNA primase | phrog_2304 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 21214 | 21615 |
| YP_009160213.1 | NC_027628_p25 | helix-turn-helix DNA binding domain protein | phrog_1340 | unknown function | unknown function | -1 | 17998 | 18318 |
| YP_009160196.1 | NC_027628_p8 | head-to-tail connector protein | phrog_501 | head closure Hc1 | connector | 1 | 6091 | 6438 |
| YP_009160206.1 | NC_027628_p18 | minor tail protein | phrog_1958 | minor tail protein | tail | 1 | 14296 | 14565 |
| YP_009160197.1 | NC_027628_p9 | minor tail protein | phrog_387 | neck protein | connector | 1 | 6445 | 6735 |
| YP_009160225.1 | NC_027628_p37 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | -1 | 24700 | 25059 |
| YP_009160211.1 | NC_027628_p23 | helix-turn-helix DNA binding domain protein | phrog_1729 | unknown function | unknown function | -1 | 17297 | 17695 |
| YP_009160194.1 | NC_027628_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4637 | 5584 |
| YP_009160199.1 | NC_027628_p11 | major tail protein | phrog_117 | major tail protein | tail | 1 | 7156 | 7794 |
| YP_009160198.1 | NC_027628_p10 | minor tail protein | phrog_1892 | minor tail protein | tail | 1 | 6732 | 7103 |
| YP_009160209.1 | NC_027628_p21 | holin | phrog_443 | holin | lysis | 1 | 16285 | 16686 |
| YP_009160221.1 | NC_027628_p33 | DNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 21931 | 22794 |
| YP_009160214.1 | NC_027628_p26 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18326 | 19372 |
| YP_009160208.2 | NC_027628_p20 | lysin | phrog_670 | endolysin | lysis | 1 | 15418 | 16272 |
| YP_009160217.1 | NC_027628_p29 | hypothetical protein | phrog_1881 | unknown function | unknown function | -1 | 20095 | 20661 |
| YP_009160200.1 | NC_027628_p12 | tail assembly chaperone | phrog_4075 | tail assembly chaperone | tail | 1 | 7822 | 8504 |
| YP_009160229.1 | NC_027628_p41 | hypothetical protein | phrog_1908 | unknown function | unknown function | -1 | 25614 | 26147 |
| YP_009160212.1 | NC_027628_p24 | hypothetical protein | phrog_1947 | unknown function | unknown function | -1 | 17699 | 17983 |
| YP_009160191.1 | NC_027628_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1886 | 3211 |
| YP_009160193.1 | NC_027628_p5 | scaffolding protein | phrog_1879 | head scaffolding protein | head and packaging | 1 | 4076 | 4630 |
| YP_009160218.1 | NC_027628_p30 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 20706 | 21377 |
| YP_009160224.1 | NC_027628_p36 | exonuclease | phrog_1870 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 23756 | 24703 |
| YP_009160203.1 | NC_027628_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 11298 | 12245 |
| YP_009160205.1 | NC_027628_p17 | minor tail protein | phrog_1910 | lectin | other | 1 | 13430 | 14248 |
| YP_009160190.1 | NC_027628_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 378 | 1889 |
| YP_009160223.1 | NC_027628_p35 | hypothetical protein | phrog_1890 | unknown function | unknown function | -1 | 23349 | 23759 |
| YP_009160232.1 | NC_027628_p44 | hypothetical protein | phrog_13647 | unknown function | unknown function | 1 | 28915 | 29070 |
| YP_009160204.1 | NC_027628_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 12253 | 13410 |
| YP_009160189.2 | NC_027628_p1 | terminase small subunit | phrog_1897 | terminase small subunit | head and packaging | 1 | 65 | 373 |
| YP_009160215.1 | NC_027628_p27 | helix-turn-helix DNA binding domain protein | phrog_1923 | unknown function | unknown function | -1 | 19369 | 19557 |
| YP_009160230.1 | NC_027628_p42 | hypothetical protein | phrog_919 | unknown function | unknown function | -1 | 26270 | 26581 |
| YP_009160222.1 | NC_027628_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | -1 | 22831 | 23298 |
| YP_009160228.1 | NC_027628_p40 | hypothetical protein | phrog_1884 | unknown function | unknown function | -1 | 25370 | 25597 |
| YP_009160207.1 | NC_027628_p19 | minor tail protein | phrog_1806 | collagen like minor tail | tail | 1 | 14562 | 15368 |
| YP_009160195.1 | NC_027628_p7 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 5610 | 6089 |
| YP_009160202.1 | NC_027628_p14 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 8512 | 11277 |
| YP_009160192.1 | NC_027628_p4 | minor capsid protein | phrog_193 | head maturation protease | head and packaging | 1 | 3218 | 3973 |
| YP_009160210.1 | NC_027628_p22 | hypothetical protein | phrog_2092 | unknown function | unknown function | -1 | 16863 | 17291 |