Genomic map of Propionibacterium phage Attacne (NC_027629)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027629
Definition
Propionibacterium phage Attacne, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus.
DB of origin
REFSEQ
Length
28876
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
54.7
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009160236.1 NC_027629_p3 portal protein phrog_104 portal protein head and packaging 1 1881 3206
YP_009160249.1 NC_027629_p16 minor tail protein phrog_110 minor tail protein tail 1 12235 13392
YP_009160266.1 NC_027629_p33 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21276 22229
YP_009160247.1 NC_027629_p14 tape measure protein phrog_58 tail length tape measure protein tail 1 8505 11270
YP_009160276.1 NC_027629_p43 hypothetical protein phrog_919 unknown function unknown function -1 26038 26346
YP_009160239.1 NC_027629_p6 major capsid protein phrog_10 major head protein head and packaging 1 4645 5592
YP_009160246.1 NC_027629_p13 tail assembly chaperone phrog_1927 tail assembly chaperone tail 1 7815 8111
YP_009160241.1 NC_027629_p8 head-to-tail connector protein phrog_501 head closure Hc1 connector 1 6099 6446
YP_009160240.1 NC_027629_p7 head-to-tail connector protein phrog_1290 head-tail adaptor connector 1 5618 6097
YP_009160258.1 NC_027629_p25 helix-turn-helix DNA binding domain protein phrog_1340 unknown function unknown function -1 17715 18035
YP_009160263.1 NC_027629_p30 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20141 20812
YP_009160278.1 NC_027629_p45 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28511 28813
YP_009160242.1 NC_027629_p9 minor tail protein phrog_387 neck protein connector 1 6453 6743
YP_009160256.1 NC_027629_p23 helix-turn-helix DNA binding domain protein phrog_1729 unknown function unknown function -1 17017 17409
YP_009160253.2 NC_027629_p20 lysin phrog_670 endolysin lysis 1 15389 16243
YP_009160235.1 NC_027629_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 373 1884
YP_009160260.1 NC_027629_p27 helix-turn-helix DNA binding domain protein phrog_1923 unknown function unknown function -1 19088 19288
YP_009160262.1 NC_027629_p29 hypothetical protein phrog_1881 unknown function unknown function -1 19536 20093
YP_009160273.1 NC_027629_p40 hypothetical protein phrog_1884 unknown function unknown function -1 24792 25022
YP_009160254.1 NC_027629_p21 holin phrog_443 holin lysis 1 16250 16654
YP_009160245.1 NC_027629_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7815 8497
YP_009160251.1 NC_027629_p18 minor tail protein phrog_1958 minor tail protein tail 1 14275 14538
YP_009160234.2 NC_027629_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 65 373
YP_009160261.1 NC_027629_p28 hypothetical protein phrog_5969 unknown function unknown function -1 19272 19481
YP_009160277.2 NC_027629_p44 hypothetical protein phrog_7333 unknown function unknown function 1 28341 28463
YP_009160264.1 NC_027629_p31 DNA primase phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 20649 21050
YP_009160250.2 NC_027629_p17 minor tail protein phrog_1910 lectin other 1 13412 14230
YP_009160255.2 NC_027629_p22 hypothetical protein phrog_21407 unknown function unknown function -1 16740 17012
YP_009160257.1 NC_027629_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17413 17697
YP_009160238.1 NC_027629_p5 scaffolding protein phrog_1879 head scaffolding protein head and packaging 1 4078 4638
YP_009160268.1 NC_027629_p35 hypothetical protein phrog_1890 unknown function unknown function -1 22780 23190
YP_009160259.1 NC_027629_p26 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18045 19091
YP_009160244.1 NC_027629_p11 major tail protein phrog_117 major tail protein tail 1 7163 7786
YP_009160265.1 NC_027629_p32 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21010 21366
YP_009160252.1 NC_027629_p19 minor tail protein phrog_1806 collagen like minor tail tail 1 14541 15347
YP_009160269.1 NC_027629_p36 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23187 24128
YP_009160275.1 NC_027629_p42 hypothetical protein phrog_919 unknown function unknown function -1 25698 26006
YP_009160271.1 NC_027629_p38 hypothetical protein phrog_4216 unknown function unknown function -1 24513 24596
YP_009160248.1 NC_027629_p15 minor tail protein phrog_106 minor tail protein tail 1 11286 12227
YP_009160270.1 NC_027629_p37 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24128 24487
YP_009160272.1 NC_027629_p39 hypothetical protein phrog_1937 unknown function unknown function -1 24593 24799
YP_009160267.1 NC_027629_p34 hypothetical protein phrog_1288 unknown function unknown function -1 22278 22739
YP_009160274.1 NC_027629_p41 hypothetical protein phrog_1908 unknown function unknown function -1 25045 25578
YP_009160237.1 NC_027629_p4 minor capsid protein phrog_193 head maturation protease head and packaging 1 3213 3968
YP_009160243.1 NC_027629_p10 minor tail protein phrog_1892 minor tail protein tail 1 6740 7111