Genomic map of Vibrio phage VP585 (NC_027981)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027981
Definition
Vibrio phage VP58.5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vhmlvirus.
DB of origin
REFSEQ
Length
42612
Host Name
Vibrio parahaemolyticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
50.87
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009167764.1 NC_027981_p57 protein of an unannotated phage phrog_1544 unknown function unknown function 1 41734 42276
YP_009167746.1 NC_027981_p39 protein of an unannotated phage singleton unknown function unknown function 1 27070 27309
YP_009167761.1 NC_027981_p54 protein of an unannotated phage phrog_6952 DNA methyltransferase other 1 40161 40811
YP_009167733.1 NC_027981_p26 protein of an unannotated phage phrog_76 tail protein tail 1 20420 20941
YP_009167722.1 NC_027981_p15 protein of an unannotated phage phrog_48 tail protein tail 1 10388 11131
YP_009167750.1 NC_027981_p43 protein of an unannotated phage phrog_4 transcriptional repressor transcription regulation -1 33985 34662
YP_009167719.1 NC_027981_p12 protein of an unannotated phage phrog_5576 unknown function unknown function 1 8915 9112
YP_009167742.1 NC_027981_p35 protein of an unannotated phage phrog_22479 unknown function unknown function -1 25409 25663
YP_009167731.1 NC_027981_p24 protein of an unannotated phage phrog_103 tail protein tail 1 16852 17226
YP_009167718.1 NC_027981_p11 protein of an unannotated phage phrog_11 baseplate spike tail 1 8221 8913
YP_009167741.1 NC_027981_p34 protein of an unannotated phage phrog_23105 unknown function unknown function -1 25176 25454
YP_009167739.1 NC_027981_p32 protein of an unannotated phage phrog_32786 unknown function unknown function -1 23983 24207
YP_009167738.1 NC_027981_p31 protein of an unannotated phage phrog_10957 unknown function unknown function -1 23683 23979
YP_009167720.1 NC_027981_p13 protein of an unannotated phage singleton unknown function unknown function 1 8994 9458
YP_009167757.1 NC_027981_p50 protein of an unannotated phage phrog_26726 unknown function unknown function 1 38385 38975
YP_009167712.1 NC_027981_p5 protein of an unannotated phage phrog_53 head maturation protease head and packaging 1 4186 5457
YP_009167751.1 NC_027981_p44 protein of an unannotated phage phrog_4834 CII-like transcriptional activator transcription regulation 1 34684 35385
YP_009167723.1 NC_027981_p16 protein of an unannotated phage singleton unknown function unknown function -1 10424 10681
YP_009167725.1 NC_027981_p18 protein of an unannotated phage phrog_2889 unknown function unknown function 1 11671 12903
YP_009167762.1 NC_027981_p55 protein of an unannotated phage phrog_7885 unknown function unknown function 1 40895 41164
YP_009167756.1 NC_027981_p49 protein of an unannotated phage phrog_6795 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 37966 38385
YP_009167745.1 NC_027981_p38 protein of an unannotated phage phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism -1 26366 27007
YP_009167747.1 NC_027981_p40 protein of an unannotated phage phrog_5272 unknown function unknown function 1 27688 29355
YP_009167728.1 NC_027981_p21 protein of an unannotated phage phrog_5714 unknown function unknown function 1 14518 14862
YP_009167737.1 NC_027981_p30 protein of an unannotated phage phrog_27479 unknown function unknown function -1 22928 23137
YP_009167763.1 NC_027981_p56 protein of an unannotated phage phrog_315 endolysin lysis 1 41161 41718
YP_009167753.1 NC_027981_p46 protein of an unannotated phage phrog_37560 unknown function unknown function 1 35912 36382
YP_009167765.1 NC_027981_p58 protein of an unannotated phage phrog_9123 unknown function unknown function 1 42291 42584
YP_009167752.1 NC_027981_p45 protein of an unannotated phage phrog_54 DksA-like zinc-finger protein other 1 35538 35804
YP_009167724.1 NC_027981_p17 protein of an unannotated phage phrog_3737 tail fiber protein tail 1 11131 11667
YP_009167736.1 NC_027981_p29 protein of an unannotated phage phrog_28655 unknown function unknown function 1 22224 22901
YP_009167748.1 NC_027981_p41 protein of an unannotated phage phrog_8 transcriptional regulator transcription regulation 1 29950 30309
YP_009167730.1 NC_027981_p23 protein of an unannotated phage phrog_55 head closure connector 1 16120 16620
YP_009167754.1 NC_027981_p47 protein of an unannotated phage phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism 1 36416 37345
YP_009167714.1 NC_027981_p7 protein of an unannotated phage phrog_29 major head protein head and packaging 1 5855 6877
YP_009167743.1 NC_027981_p36 protein of an unannotated phage phrog_18491 unknown function unknown function -1 25638 25871
YP_009167717.1 NC_027981_p10 protein of an unannotated phage phrog_1072 unknown function unknown function 1 7785 8333
YP_009167749.1 NC_027981_p42 protein of an unannotated phage phrog_4913 replication DNA, RNA and nucleotide metabolism -1 30316 33669
YP_009167726.1 NC_027981_p19 protein of an unannotated phage phrog_3206 Avd protein of DGR DNA, RNA and nucleotide metabolism 1 13000 13320
YP_009167708.1 NC_027981_p1 protein of an unannotated phage phrog_57 terminase small subunit head and packaging 1 74 655
YP_009167755.1 NC_027981_p48 protein of an unannotated phage phrog_3373 unknown function unknown function 1 37400 37969
YP_009167734.1 NC_027981_p27 protein of an unannotated phage phrog_46 baseplate hub tail 1 20931 21137
YP_009167709.1 NC_027981_p2 protein of an unannotated phage phrog_15 terminase large subunit head and packaging 1 561 2444
YP_009167715.1 NC_027981_p8 protein of an unannotated phage phrog_22723 unknown function unknown function 1 6888 7253
YP_009167758.1 NC_027981_p51 protein of an unannotated phage phrog_24854 unknown function unknown function 1 38981 39142
YP_009167721.1 NC_027981_p14 protein of an unannotated phage phrog_6 baseplate wedge subunit tail 1 9460 10395
YP_009167716.1 NC_027981_p9 protein of an unannotated phage phrog_27 tail completion or Neck1 protein connector 1 7255 7788
YP_009167759.1 NC_027981_p52 protein of an unannotated phage singleton unknown function unknown function 1 39115 39333
YP_009167729.1 NC_027981_p22 protein of an unannotated phage phrog_23 tail sheath tail 1 14913 16118
YP_009167740.1 NC_027981_p33 protein of an unannotated phage singleton unknown function unknown function -1 24217 25179
YP_009167713.1 NC_027981_p6 protein of an unannotated phage phrog_49 head decoration head and packaging 1 5477 5791
YP_009167735.1 NC_027981_p28 protein of an unannotated phage phrog_52 tail protein tail 1 21141 22106
YP_009167727.1 NC_027981_p20 protein of an unannotated phage phrog_1423 Reverse transcriptase DNA, RNA and nucleotide metabolism 1 13317 14594
YP_009167710.1 NC_027981_p3 protein of an unannotated phage phrog_75 head-tail adaptor Ad1 connector 1 2437 2700
YP_009167744.1 NC_027981_p37 protein of an unannotated phage phrog_15913 unknown function unknown function -1 26119 26394
YP_009167711.1 NC_027981_p4 protein of an unannotated phage phrog_21 portal protein head and packaging 1 2700 4193
YP_009167760.1 NC_027981_p53 protein of an unannotated phage phrog_6025 DNA methyltransferase other 1 39749 40240
YP_009167732.1 NC_027981_p25 protein of an unannotated phage phrog_28 tail length tape measure protein tail 1 17398 20463