Genomic map of Escherichia phage vB_EcoP_24B (NC_027984)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027984
Definition
Stx2 converting phage vB_EcoP_24B, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus.
DB of origin
REFSEQ
Length
57677
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
88
%GC
49.68
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009168100.1 NC_027984_p8 hypothetical protein singleton unknown function unknown function -1 2840 2911
YP_009168150.1 NC_027984_p58 Sterm phrog_370 terminase small subunit head and packaging 1 28900 29706
YP_009168159.1 NC_027984_p67 hypothetical protein phrog_482 unknown function unknown function 1 36408 36896
YP_009168128.1 NC_027984_p36 hypothetical DAM phrog_111 DNA methyltransferase other 1 17559 18086
YP_009168158.1 NC_027984_p66 hypothetical protein phrog_19479 unknown function unknown function -1 36321 36593
YP_009168120.1 NC_027984_p28 CII phrog_191 CII-like transcriptional activator transcription regulation 1 12086 12385
YP_009168177.1 NC_027984_p85 hypothetical protein phrog_616 unknown function unknown function 1 49148 57571
YP_009168094.1 NC_027984_p2 excisionase phrog_66 excisionase and transcriptional regulator integration and excision -1 1389 1571
YP_009168126.1 NC_027984_p34 Lar phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 16923 17159
YP_009168097.1 NC_027984_p5 hypothetical protein phrog_1888 unknown function unknown function -1 2248 2646
YP_009168140.1 NC_027984_p48 hypothetical protein phrog_143 unknown function unknown function 1 23314 25251
YP_009168135.1 NC_027984_p43 Q phrog_79 anti-termination protein Q-like transcription regulation 1 20764 21237
YP_009168104.1 NC_027984_p12 hypothetical protein phrog_18463 unknown function unknown function 1 4487 4813
YP_009168180.1 NC_027984_p88 hypothetical protein phrog_21686 unknown function unknown function -1 55397 55768
YP_009168149.1 NC_027984_p57 hypothetical protein phrog_6954 Rz-like spanin lysis 1 28599 28844
YP_009168162.1 NC_027984_p70 hypothetical protein phrog_399 structural protein head and packaging 1 37443 38093
YP_009168122.1 NC_027984_p30 P phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 13435 16341
YP_009168165.1 NC_027984_p73 hypothetical tail fiber protein phrog_576 tail fiber protein tail 1 39909 40298
YP_009168115.1 NC_027984_p23 Stk phrog_2361 serine-threonine kinase other -1 8963 10009
YP_009168160.1 NC_027984_p68 hypothetical protein phrog_437 virion structural protein head and packaging 1 36772 37443
YP_009168139.1 NC_027984_p47 hypothetical protein phrog_24488 unknown function unknown function -1 22902 23069
YP_009168173.1 NC_027984_p81 hypothetical protein phrog_611 unknown function unknown function 1 46475 47131
YP_009168143.1 NC_027984_p51 S phrog_20 holin lysis 1 25955 26170
YP_009168105.1 NC_027984_p13 hypothetical protein phrog_1998 unknown function unknown function -1 4508 4696
YP_009168121.1 NC_027984_p29 O phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 12548 13324
YP_009168175.1 NC_027984_p83 hypothetical protein phrog_594 unknown function unknown function 1 47590 47841
YP_009168106.1 NC_027984_p14 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 4690 5367
YP_009168163.1 NC_027984_p71 tail spike protein phrog_366 tail fiber protein tail 1 38090 40027
YP_009168137.1 NC_027984_p45 Cat phrog_12857 unknown function unknown function -1 22125 22784
YP_009168099.1 NC_027984_p7 hypothetical protein phrog_60 unknown function unknown function -1 2830 3735
YP_009168151.1 NC_027984_p59 Lterm phrog_2 terminase large subunit head and packaging 1 29687 31393
YP_009168145.1 NC_027984_p53 D_Ant phrog_524 anti-repressor Ant transcription regulation 1 26979 27548
YP_009168141.1 NC_027984_p49 hypothetical protein phrog_494 unknown function unknown function 1 25386 25565
YP_009168131.1 NC_027984_p39 Ant phrog_377 anti-repressor Ant transcription regulation 1 18540 19217
YP_009168161.1 NC_027984_p69 hypothetical protein phrog_18985 unknown function unknown function 1 37196 37492
YP_009168146.1 NC_027984_p54 Rz phrog_13 Rz-like spanin lysis 1 27702 28166
YP_009168111.1 NC_027984_p19 Ssb phrog_646 unknown function unknown function -1 6876 7244
YP_009168168.1 NC_027984_p76 hypothetical protein phrog_496 tail fiber protein tail 1 42543 43811
YP_009168176.1 NC_027984_p84 hypothetical protein phrog_601 unknown function unknown function 1 47852 49117
YP_009168133.1 NC_027984_p41 NinG phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 20014 20619
YP_009168134.1 NC_027984_p42 NinH phrog_268 unknown function unknown function 1 20616 20810
YP_009168179.1 NC_027984_p87 hypothetical protein phrog_21936 unknown function unknown function -1 54666 55046
YP_009168123.1 NC_027984_p31 hypothetical protein phrog_2239 unknown function unknown function 1 16342 16611
YP_009168155.1 NC_027984_p63 hypothetical protein phrog_334 major head protein head and packaging 1 34726 35940
YP_009168125.1 NC_027984_p33 hypothetical protein phrog_1785 unknown function unknown function 1 16697 16912
YP_009168109.1 NC_027984_p17 Kil phrog_2461 Kil protein for bacterial septation inhibition other -1 6527 6796
YP_009168152.1 NC_027984_p60 Port phrog_156 portal protein head and packaging 1 31393 33537
YP_009168136.1 NC_027984_p44 interupted Stx2A protein singleton unknown function unknown function 1 22021 22119
YP_009168164.1 NC_027984_p72 hypothetical protein phrog_18077 unknown function unknown function -1 39335 40189
YP_009168169.1 NC_027984_p77 hypothetical protein phrog_557 outer membrane protein other 1 43877 44104
YP_009168116.1 NC_027984_p24 resolvase phrog_3875 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 10003 10464
YP_009168112.1 NC_027984_p20 hypothetical protein phrog_1636 unknown function unknown function -1 7395 7865
YP_009168096.1 NC_027984_p4 hypothetical protein phrog_29320 unknown function unknown function -1 1871 2251
YP_009168127.1 NC_027984_p35 NinB phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 17017 17562
YP_009168144.1 NC_027984_p52 R phrog_7 endolysin lysis 1 26175 26708
YP_009168129.1 NC_027984_p37 NinE phrog_288 unknown function unknown function 1 18083 18265
YP_009168098.1 NC_027984_p6 hypothetical protein phrog_292 unknown function unknown function -1 2682 2897
YP_009168117.1 NC_027984_p25 hypothetical protein phrog_3467 unknown function unknown function -1 10532 10873
YP_009168107.1 NC_027984_p15 Bet phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 5364 6149
YP_009168178.1 NC_027984_p86 hypothetical protein phrog_19234 unknown function unknown function -1 52191 52514
YP_009168103.1 NC_027984_p11 hypothetical protein phrog_292 unknown function unknown function -1 4344 4535
YP_009168101.1 NC_027984_p9 C4 zinc finger protein phrog_54 DksA-like zinc-finger protein other -1 3732 3953
YP_009168119.1 NC_027984_p27 Cro phrog_35 transcriptional repressor transcription regulation 1 11720 11947
YP_009168124.1 NC_027984_p32 hypothetical protein phrog_5907 unknown function unknown function 1 16608 16700
YP_009168156.1 NC_027984_p64 hypothetical protein phrog_17229 unknown function unknown function -1 35116 35400
YP_009168132.1 NC_027984_p40 Roi phrog_63 anti-repressor Ant transcription regulation 1 19286 20014
YP_009168171.1 NC_027984_p79 Lom phrog_108 Lom outer membrane protein other 1 44818 45552
YP_009168093.1 NC_027984_p1 integrase phrog_1 integrase integration and excision 1 236 1405
YP_009168148.1 NC_027984_p56 Bor phrog_260 Bor-like outer membrane protein other -1 28198 28491
YP_009168142.1 NC_027984_p50 hypothetical protein phrog_8301 unknown function unknown function 1 25432 25878
YP_009168153.1 NC_027984_p61 hypothetical protein phrog_18958 unknown function unknown function -1 33689 34078
YP_009168147.1 NC_027984_p55 Rz1 phrog_3198 Rz-like spanin lysis 1 27922 28107
YP_009168154.1 NC_027984_p62 hypothetical protein phrog_479 unknown function unknown function 1 33695 34702
YP_009168174.1 NC_027984_p82 hypothetical protein phrog_596 unknown function unknown function 1 47134 47580
YP_009168172.1 NC_027984_p80 hypothetical protein phrog_610 unknown function unknown function 1 45981 46382
YP_009168170.1 NC_027984_p78 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 44110 44727
YP_009168102.1 NC_027984_p10 hypothetical protein phrog_303 unknown function unknown function -1 4052 4333
YP_009168157.1 NC_027984_p65 hypothetical protein phrog_486 virion structural protein head and packaging 1 35996 36385
YP_009168113.1 NC_027984_p21 N phrog_271 anti-termination protein N-like transcription regulation -1 7924 8307
YP_009168167.1 NC_027984_p75 hypothetical protein phrog_511 internal virion protein head and packaging 1 40843 42546
YP_009168166.1 NC_027984_p74 hypothetical protein phrog_2014 unknown function unknown function 1 40345 40626
YP_009168138.1 NC_027984_p46 hypothetical protein singleton unknown function unknown function -1 22874 22999
YP_009168130.1 NC_027984_p38 hypothetical protein singleton unknown function unknown function 1 18262 18330
YP_009168118.1 NC_027984_p26 CI phrog_4 transcriptional repressor transcription regulation -1 10934 11641
YP_009168114.1 NC_027984_p22 hypothetical protein phrog_4063 unknown function unknown function -1 8796 8960
YP_009168095.1 NC_027984_p3 hypothetical protein phrog_285 unknown function unknown function -1 1632 1883
YP_009168110.1 NC_027984_p18 CIII phrog_550 CIII anti-termination transcription regulation -1 6639 6803
YP_009168108.1 NC_027984_p16 Gam phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 6155 6451