| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027984 |
Definition |
Stx2 converting phage vB_EcoP_24B, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus. |
DB of origin |
REFSEQ |
Length |
57677 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
88 |
%GC |
49.68 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009168100.1 | NC_027984_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2840 | 2911 |
| YP_009168150.1 | NC_027984_p58 | Sterm | phrog_370 | terminase small subunit | head and packaging | 1 | 28900 | 29706 |
| YP_009168159.1 | NC_027984_p67 | hypothetical protein | phrog_482 | unknown function | unknown function | 1 | 36408 | 36896 |
| YP_009168128.1 | NC_027984_p36 | hypothetical DAM | phrog_111 | DNA methyltransferase | other | 1 | 17559 | 18086 |
| YP_009168158.1 | NC_027984_p66 | hypothetical protein | phrog_19479 | unknown function | unknown function | -1 | 36321 | 36593 |
| YP_009168120.1 | NC_027984_p28 | CII | phrog_191 | CII-like transcriptional activator | transcription regulation | 1 | 12086 | 12385 |
| YP_009168177.1 | NC_027984_p85 | hypothetical protein | phrog_616 | unknown function | unknown function | 1 | 49148 | 57571 |
| YP_009168094.1 | NC_027984_p2 | excisionase | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 1389 | 1571 |
| YP_009168126.1 | NC_027984_p34 | Lar | phrog_599 | Lar-like restriction alleviation protein | moron, auxiliary metabolic gene and host takeover | 1 | 16923 | 17159 |
| YP_009168097.1 | NC_027984_p5 | hypothetical protein | phrog_1888 | unknown function | unknown function | -1 | 2248 | 2646 |
| YP_009168140.1 | NC_027984_p48 | hypothetical protein | phrog_143 | unknown function | unknown function | 1 | 23314 | 25251 |
| YP_009168135.1 | NC_027984_p43 | Q | phrog_79 | anti-termination protein Q-like | transcription regulation | 1 | 20764 | 21237 |
| YP_009168104.1 | NC_027984_p12 | hypothetical protein | phrog_18463 | unknown function | unknown function | 1 | 4487 | 4813 |
| YP_009168180.1 | NC_027984_p88 | hypothetical protein | phrog_21686 | unknown function | unknown function | -1 | 55397 | 55768 |
| YP_009168149.1 | NC_027984_p57 | hypothetical protein | phrog_6954 | Rz-like spanin | lysis | 1 | 28599 | 28844 |
| YP_009168162.1 | NC_027984_p70 | hypothetical protein | phrog_399 | structural protein | head and packaging | 1 | 37443 | 38093 |
| YP_009168122.1 | NC_027984_p30 | P | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 13435 | 16341 |
| YP_009168165.1 | NC_027984_p73 | hypothetical tail fiber protein | phrog_576 | tail fiber protein | tail | 1 | 39909 | 40298 |
| YP_009168115.1 | NC_027984_p23 | Stk | phrog_2361 | serine-threonine kinase | other | -1 | 8963 | 10009 |
| YP_009168160.1 | NC_027984_p68 | hypothetical protein | phrog_437 | virion structural protein | head and packaging | 1 | 36772 | 37443 |
| YP_009168139.1 | NC_027984_p47 | hypothetical protein | phrog_24488 | unknown function | unknown function | -1 | 22902 | 23069 |
| YP_009168173.1 | NC_027984_p81 | hypothetical protein | phrog_611 | unknown function | unknown function | 1 | 46475 | 47131 |
| YP_009168143.1 | NC_027984_p51 | S | phrog_20 | holin | lysis | 1 | 25955 | 26170 |
| YP_009168105.1 | NC_027984_p13 | hypothetical protein | phrog_1998 | unknown function | unknown function | -1 | 4508 | 4696 |
| YP_009168121.1 | NC_027984_p29 | O | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 12548 | 13324 |
| YP_009168175.1 | NC_027984_p83 | hypothetical protein | phrog_594 | unknown function | unknown function | 1 | 47590 | 47841 |
| YP_009168106.1 | NC_027984_p14 | exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 4690 | 5367 |
| YP_009168163.1 | NC_027984_p71 | tail spike protein | phrog_366 | tail fiber protein | tail | 1 | 38090 | 40027 |
| YP_009168137.1 | NC_027984_p45 | Cat | phrog_12857 | unknown function | unknown function | -1 | 22125 | 22784 |
| YP_009168099.1 | NC_027984_p7 | hypothetical protein | phrog_60 | unknown function | unknown function | -1 | 2830 | 3735 |
| YP_009168151.1 | NC_027984_p59 | Lterm | phrog_2 | terminase large subunit | head and packaging | 1 | 29687 | 31393 |
| YP_009168145.1 | NC_027984_p53 | D_Ant | phrog_524 | anti-repressor Ant | transcription regulation | 1 | 26979 | 27548 |
| YP_009168141.1 | NC_027984_p49 | hypothetical protein | phrog_494 | unknown function | unknown function | 1 | 25386 | 25565 |
| YP_009168131.1 | NC_027984_p39 | Ant | phrog_377 | anti-repressor Ant | transcription regulation | 1 | 18540 | 19217 |
| YP_009168161.1 | NC_027984_p69 | hypothetical protein | phrog_18985 | unknown function | unknown function | 1 | 37196 | 37492 |
| YP_009168146.1 | NC_027984_p54 | Rz | phrog_13 | Rz-like spanin | lysis | 1 | 27702 | 28166 |
| YP_009168111.1 | NC_027984_p19 | Ssb | phrog_646 | unknown function | unknown function | -1 | 6876 | 7244 |
| YP_009168168.1 | NC_027984_p76 | hypothetical protein | phrog_496 | tail fiber protein | tail | 1 | 42543 | 43811 |
| YP_009168176.1 | NC_027984_p84 | hypothetical protein | phrog_601 | unknown function | unknown function | 1 | 47852 | 49117 |
| YP_009168133.1 | NC_027984_p41 | NinG | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 20014 | 20619 |
| YP_009168134.1 | NC_027984_p42 | NinH | phrog_268 | unknown function | unknown function | 1 | 20616 | 20810 |
| YP_009168179.1 | NC_027984_p87 | hypothetical protein | phrog_21936 | unknown function | unknown function | -1 | 54666 | 55046 |
| YP_009168123.1 | NC_027984_p31 | hypothetical protein | phrog_2239 | unknown function | unknown function | 1 | 16342 | 16611 |
| YP_009168155.1 | NC_027984_p63 | hypothetical protein | phrog_334 | major head protein | head and packaging | 1 | 34726 | 35940 |
| YP_009168125.1 | NC_027984_p33 | hypothetical protein | phrog_1785 | unknown function | unknown function | 1 | 16697 | 16912 |
| YP_009168109.1 | NC_027984_p17 | Kil | phrog_2461 | Kil protein for bacterial septation inhibition | other | -1 | 6527 | 6796 |
| YP_009168152.1 | NC_027984_p60 | Port | phrog_156 | portal protein | head and packaging | 1 | 31393 | 33537 |
| YP_009168136.1 | NC_027984_p44 | interupted Stx2A protein | singleton | unknown function | unknown function | 1 | 22021 | 22119 |
| YP_009168164.1 | NC_027984_p72 | hypothetical protein | phrog_18077 | unknown function | unknown function | -1 | 39335 | 40189 |
| YP_009168169.1 | NC_027984_p77 | hypothetical protein | phrog_557 | outer membrane protein | other | 1 | 43877 | 44104 |
| YP_009168116.1 | NC_027984_p24 | resolvase | phrog_3875 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 10003 | 10464 |
| YP_009168112.1 | NC_027984_p20 | hypothetical protein | phrog_1636 | unknown function | unknown function | -1 | 7395 | 7865 |
| YP_009168096.1 | NC_027984_p4 | hypothetical protein | phrog_29320 | unknown function | unknown function | -1 | 1871 | 2251 |
| YP_009168127.1 | NC_027984_p35 | NinB | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 17017 | 17562 |
| YP_009168144.1 | NC_027984_p52 | R | phrog_7 | endolysin | lysis | 1 | 26175 | 26708 |
| YP_009168129.1 | NC_027984_p37 | NinE | phrog_288 | unknown function | unknown function | 1 | 18083 | 18265 |
| YP_009168098.1 | NC_027984_p6 | hypothetical protein | phrog_292 | unknown function | unknown function | -1 | 2682 | 2897 |
| YP_009168117.1 | NC_027984_p25 | hypothetical protein | phrog_3467 | unknown function | unknown function | -1 | 10532 | 10873 |
| YP_009168107.1 | NC_027984_p15 | Bet | phrog_252 | Bet-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 5364 | 6149 |
| YP_009168178.1 | NC_027984_p86 | hypothetical protein | phrog_19234 | unknown function | unknown function | -1 | 52191 | 52514 |
| YP_009168103.1 | NC_027984_p11 | hypothetical protein | phrog_292 | unknown function | unknown function | -1 | 4344 | 4535 |
| YP_009168101.1 | NC_027984_p9 | C4 zinc finger protein | phrog_54 | DksA-like zinc-finger protein | other | -1 | 3732 | 3953 |
| YP_009168119.1 | NC_027984_p27 | Cro | phrog_35 | transcriptional repressor | transcription regulation | 1 | 11720 | 11947 |
| YP_009168124.1 | NC_027984_p32 | hypothetical protein | phrog_5907 | unknown function | unknown function | 1 | 16608 | 16700 |
| YP_009168156.1 | NC_027984_p64 | hypothetical protein | phrog_17229 | unknown function | unknown function | -1 | 35116 | 35400 |
| YP_009168132.1 | NC_027984_p40 | Roi | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 19286 | 20014 |
| YP_009168171.1 | NC_027984_p79 | Lom | phrog_108 | Lom outer membrane protein | other | 1 | 44818 | 45552 |
| YP_009168093.1 | NC_027984_p1 | integrase | phrog_1 | integrase | integration and excision | 1 | 236 | 1405 |
| YP_009168148.1 | NC_027984_p56 | Bor | phrog_260 | Bor-like outer membrane protein | other | -1 | 28198 | 28491 |
| YP_009168142.1 | NC_027984_p50 | hypothetical protein | phrog_8301 | unknown function | unknown function | 1 | 25432 | 25878 |
| YP_009168153.1 | NC_027984_p61 | hypothetical protein | phrog_18958 | unknown function | unknown function | -1 | 33689 | 34078 |
| YP_009168147.1 | NC_027984_p55 | Rz1 | phrog_3198 | Rz-like spanin | lysis | 1 | 27922 | 28107 |
| YP_009168154.1 | NC_027984_p62 | hypothetical protein | phrog_479 | unknown function | unknown function | 1 | 33695 | 34702 |
| YP_009168174.1 | NC_027984_p82 | hypothetical protein | phrog_596 | unknown function | unknown function | 1 | 47134 | 47580 |
| YP_009168172.1 | NC_027984_p80 | hypothetical protein | phrog_610 | unknown function | unknown function | 1 | 45981 | 46382 |
| YP_009168170.1 | NC_027984_p78 | hypothetical protein | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 44110 | 44727 |
| YP_009168102.1 | NC_027984_p10 | hypothetical protein | phrog_303 | unknown function | unknown function | -1 | 4052 | 4333 |
| YP_009168157.1 | NC_027984_p65 | hypothetical protein | phrog_486 | virion structural protein | head and packaging | 1 | 35996 | 36385 |
| YP_009168113.1 | NC_027984_p21 | N | phrog_271 | anti-termination protein N-like | transcription regulation | -1 | 7924 | 8307 |
| YP_009168167.1 | NC_027984_p75 | hypothetical protein | phrog_511 | internal virion protein | head and packaging | 1 | 40843 | 42546 |
| YP_009168166.1 | NC_027984_p74 | hypothetical protein | phrog_2014 | unknown function | unknown function | 1 | 40345 | 40626 |
| YP_009168138.1 | NC_027984_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22874 | 22999 |
| YP_009168130.1 | NC_027984_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18262 | 18330 |
| YP_009168118.1 | NC_027984_p26 | CI | phrog_4 | transcriptional repressor | transcription regulation | -1 | 10934 | 11641 |
| YP_009168114.1 | NC_027984_p22 | hypothetical protein | phrog_4063 | unknown function | unknown function | -1 | 8796 | 8960 |
| YP_009168095.1 | NC_027984_p3 | hypothetical protein | phrog_285 | unknown function | unknown function | -1 | 1632 | 1883 |
| YP_009168110.1 | NC_027984_p18 | CIII | phrog_550 | CIII anti-termination | transcription regulation | -1 | 6639 | 6803 |
| YP_009168108.1 | NC_027984_p16 | Gam | phrog_259 | gam-like host nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | -1 | 6155 | 6451 |