Genomic map of Citrobacter phage CVT22 (NC_027988)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027988
Definition
Citrobacter phage CVT22, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
47636
Host Name
Citrobacter sp. TM1552
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
41.63
Number of singletons
46
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009168439.1 NC_027988_p56 hypothetical protein singleton unknown function unknown function -1 36286 36531
YP_009168391.1 NC_027988_p8 hypothetical protein phrog_17024 unknown function unknown function 1 8227 8598
YP_009168424.1 NC_027988_p41 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28441 30348
YP_009168400.1 NC_027988_p17 endolysin phrog_7 endolysin lysis 1 19810 20358
YP_009168434.1 NC_027988_p51 hypothetical protein singleton unknown function unknown function -1 34552 34779
YP_009168453.1 NC_027988_p71 hypothetical protein singleton unknown function unknown function -1 43140 43277
YP_009168433.1 NC_027988_p50 ATP grasp protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 33796 34551
YP_009168462.1 NC_027988_p80 hypothetical protein singleton unknown function unknown function -1 45472 45657
YP_009168407.1 NC_027988_p25 hypothetical protein phrog_5335 unknown function unknown function 1 22386 22910
YP_009168432.1 NC_027988_p49 hypothetical protein singleton unknown function unknown function -1 33608 33799
YP_009168382.1 NC_027988_p82 hypothetical protein singleton unknown function unknown function -1 45892 46029
YP_009168423.2 NC_027988_p40 hypothetical protein singleton unknown function unknown function -1 28244 28375
YP_009168381.1 NC_027988_p81 hypothetical protein singleton unknown function unknown function -1 45654 45890
YP_009168386.1 NC_027988_p3 terminase large subunit phrog_38 terminase large subunit head and packaging 1 2731 4335
YP_009168427.1 NC_027988_p44 hypothetical protein phrog_22041 unknown function unknown function -1 30820 31068
YP_009168430.1 NC_027988_p47 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 31664 33319
YP_009168431.1 NC_027988_p48 hypothetical protein singleton unknown function unknown function -1 33367 33597
YP_009168457.1 NC_027988_p75 hypothetical protein singleton unknown function unknown function -1 44288 44488
YP_009168425.1 NC_027988_p42 hypothetical protein singleton unknown function unknown function -1 30345 30554
YP_009168451.1 NC_027988_p68 hypothetical protein singleton unknown function unknown function -1 42390 42614
YP_009168394.1 NC_027988_p11 head closure protein phrog_8094 tail appendage tail 1 9585 11885
YP_009168438.1 NC_027988_p55 hypothetical protein singleton unknown function unknown function -1 36045 36284
YP_009168420.1 NC_027988_p37 hypothetical protein phrog_862 unknown function unknown function -1 27032 27745
YP_009168403.1 NC_027988_p21 endonuclease phrog_4590 unknown function unknown function 1 20956 21237
YP_009168458.1 NC_027988_p76 hypothetical protein singleton unknown function unknown function -1 44488 44643
YP_009168440.1 NC_027988_p57 hypothetical protein phrog_11055 unknown function unknown function -1 36524 37084
YP_009168409.1 NC_027988_p27 hypothetical protein singleton unknown function unknown function -1 23324 23476
YP_009168397.1 NC_027988_p14 hypothetical protein phrog_18427 unknown function unknown function 1 12719 17440
YP_009168448.1 NC_027988_p65 amidotransferase phrog_7218 glutamine amidotransferase moron, auxiliary metabolic gene and host takeover -1 40198 40842
YP_009168415.1 NC_027988_p32 hypothetical protein phrog_1312 unknown function unknown function -1 25153 25305
YP_009168452.2 NC_027988_p70 hypothetical protein singleton unknown function unknown function -1 42893 43249
YP_009170645.1 NC_027988_p19 o-spanin singleton Rz-like spanin lysis 1 20577 20822
YP_009170646.1 NC_027988_p69 hypothetical protein singleton unknown function unknown function -1 42614 42757
YP_009168441.1 NC_027988_p58 hypothetical protein singleton unknown function unknown function -1 37085 37324
YP_009168445.1 NC_027988_p62 amidotransferase phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 38576 39754
YP_009168416.1 NC_027988_p33 hypothetical protein singleton unknown function unknown function -1 25375 25608
YP_009168417.1 NC_027988_p34 HNHc superfamily protein phrog_3106 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25622 25996
YP_009168422.1 NC_027988_p39 hypothetical protein singleton unknown function unknown function -1 28002 28256
YP_009168413.1 NC_027988_p30 hypothetical protein singleton unknown function unknown function -1 24687 24842
YP_009168443.1 NC_027988_p60 hypothetical protein singleton unknown function unknown function -1 37548 37751
YP_009168384.1 NC_027988_p1 tail protein phrog_18522 tail protein tail 1 555 2237
YP_009168437.1 NC_027988_p54 amidoligase phrog_7469 amidoligase enzyme other -1 35239 36045
YP_009168393.1 NC_027988_p10 hypothetical protein phrog_9082 unknown function unknown function 1 9409 9576
YP_009168418.1 NC_027988_p35 hypothetical protein singleton unknown function unknown function -1 26001 26189
YP_009168419.1 NC_027988_p36 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 26186 26980
YP_009168449.1 NC_027988_p66 hypothetical protein singleton unknown function unknown function -1 40843 41064
YP_009168456.1 NC_027988_p74 hypothetical protein singleton unknown function unknown function -1 43860 44090
YP_009168428.1 NC_027988_p45 sigma factor phrog_1740 RNA polymerase sigma factor transcription regulation -1 31061 31540
YP_009168461.1 NC_027988_p79 hypothetical protein singleton unknown function unknown function -1 45296 45475
YP_009168398.1 NC_027988_p15 hypothetical protein phrog_18587 unknown function unknown function 1 17443 19605
YP_009168389.1 NC_027988_p6 porin superfamily protein phrog_7931 unknown function unknown function 1 6521 7267
YP_009168410.1 NC_027988_p28 AdoMet-MTase singleton unknown function unknown function -1 23463 23681
YP_009168408.2 NC_027988_p26 hypothetical protein singleton unknown function unknown function 1 22894 23061
YP_009168444.1 NC_027988_p61 COOH-NH2 ligase phrog_3815 COOH.NH2 ligase other -1 37753 38556
YP_009168426.2 NC_027988_p43 hypothetical protein singleton unknown function unknown function -1 30554 30820
YP_009168429.1 NC_027988_p46 hypothetical protein singleton unknown function unknown function -1 31540 31662
YP_009168385.1 NC_027988_p2 hypothetical protein phrog_8035 unknown function unknown function 1 2234 2731
YP_009168399.1 NC_027988_p16 holin singleton holin lysis 1 19632 19835
YP_009168392.1 NC_027988_p9 adaptor protein phrog_7592 tail protein tail 1 8651 9409
YP_009168395.1 NC_027988_p12 hypothetical protein singleton unknown function unknown function 1 11885 12175
YP_009168455.1 NC_027988_p73 hypothetical protein phrog_3878 unknown function unknown function -1 43477 43860
YP_009168388.1 NC_027988_p5 hypothetical protein phrog_8956 unknown function unknown function 1 6102 6365
YP_009168442.1 NC_027988_p59 hypothetical protein singleton unknown function unknown function -1 37324 37548
YP_009168390.1 NC_027988_p7 major capsid protein phrog_267 major head protein head and packaging 1 7278 8216
YP_009168459.1 NC_027988_p77 hypothetical protein singleton unknown function unknown function -1 44653 44868
YP_009168396.1 NC_027988_p13 hypothetical protein phrog_8168 unknown function unknown function 1 12179 12709
YP_009168446.1 NC_027988_p63 hypothetical protein singleton unknown function unknown function -1 39768 39980
YP_009168404.1 NC_027988_p22 hypothetical protein phrog_9732 unknown function unknown function 1 21241 21708
YP_009168435.2 NC_027988_p52 hypothetical protein singleton unknown function unknown function -1 34779 35012
YP_009168411.2 NC_027988_p29 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 23671 24609
YP_009168436.1 NC_027988_p53 hypothetical protein singleton unknown function unknown function -1 35012 35239
YP_009168447.1 NC_027988_p64 hypothetical protein phrog_25928 unknown function unknown function -1 39981 40211
YP_009168454.1 NC_027988_p72 hypothetical protein singleton unknown function unknown function -1 43277 43480
YP_009168450.1 NC_027988_p67 hypothetical protein phrog_34254 unknown function unknown function -1 41061 42389
YP_009168405.1 NC_027988_p23 hypothetical protein singleton unknown function unknown function 1 21717 22157
YP_009168421.1 NC_027988_p38 hypothetical protein singleton unknown function unknown function -1 27790 28005
YP_009168402.1 NC_027988_p20 hypothetical protein singleton unknown function unknown function 1 20819 20956
YP_009168387.1 NC_027988_p4 portal protein phrog_332 head-tail adaptor connector 1 4351 6102
YP_009168406.1 NC_027988_p24 hypothetical protein singleton unknown function unknown function 1 22171 22374
YP_009168414.1 NC_027988_p31 AAT_I superfamily protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24842 25153
YP_009168383.1 NC_027988_p83 hypothetical protein singleton unknown function unknown function -1 46525 47136
YP_009168460.2 NC_027988_p78 hypothetical protein singleton unknown function unknown function -1 44849 45082
YP_009168401.1 NC_027988_p18 i-spanin singleton unknown function unknown function 1 20348 20674