Genomic map of Lactobacillus phage LBR48 (NC_027990)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027990
Definition
Lactobacillus phage LBR48, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Anamdongvirus; Lactobacillus virus LBR48.
DB of origin
REFSEQ
Length
48211
Host Name
Lactobacillus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
45.87
Number of singletons
38
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009168571.1 NC_027990_p41 sensor protein phrog_98 unknown function unknown function 1 18516 18914
YP_009168564.1 NC_027990_p34 hypothetical protein singleton unknown function unknown function 1 16454 16708
YP_009168540.1 NC_027990_p10 integrase phrog_1 integrase integration and excision -1 5574 6758
YP_009168567.1 NC_027990_p37 hypothetical protein singleton unknown function unknown function 1 17721 17894
YP_009168568.1 NC_027990_p38 hypothetical protein phrog_7157 unknown function unknown function 1 17891 18100
YP_009168601.1 NC_027990_p71 hypothetical protein phrog_1778 unknown function unknown function 1 35109 35483
YP_009168545.1 NC_027990_p15 transcription regulator phrog_8 transcriptional regulator transcription regulation -1 9114 9497
YP_009168555.1 NC_027990_p25 hypothetical protein singleton unknown function unknown function 1 11852 12076
YP_009168581.1 NC_027990_p51 hypothetical protein singleton unknown function unknown function 1 23010 23099
YP_009168596.1 NC_027990_p66 morphogenesis protein phrog_222 tail completion or Neck1 protein connector 1 32135 32734
YP_009168609.1 NC_027990_p79 tape measure protein singleton unknown function unknown function 1 40426 41211
YP_009168605.1 NC_027990_p75 tail protein singleton unknown function unknown function 1 36458 37996
YP_009168577.1 NC_027990_p47 toxin component phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 21634 21831
YP_009168569.1 NC_027990_p39 hypothetical protein singleton unknown function unknown function 1 18160 18357
YP_009168579.1 NC_027990_p49 hypothetical protein singleton unknown function unknown function 1 22396 22491
YP_009168533.1 NC_027990_p3 hypothetical protein singleton unknown function unknown function 1 2250 2381
YP_009168563.1 NC_027990_p33 hypothetical protein singleton unknown function unknown function 1 16305 16457
YP_009168612.1 NC_027990_p82 hypothetical protein phrog_196 baseplate hub tail 1 42252 43493
YP_009168585.1 NC_027990_p55 terminase large subunit phrog_8711 terminase large subunit head and packaging 1 24299 24649
YP_009168542.1 NC_027990_p12 membrane protein phrog_9700 unknown function unknown function -1 7564 8157
YP_009168608.1 NC_027990_p78 hypothetical protein singleton unknown function unknown function 1 39029 40324
YP_009168603.1 NC_027990_p73 hypothetical protein singleton unknown function unknown function 1 35679 35888
YP_009168547.1 NC_027990_p17 hypothetical protein singleton unknown function unknown function 1 9896 10066
YP_009168572.1 NC_027990_p42 hypothetical protein singleton unknown function unknown function 1 18907 19056
YP_009168559.1 NC_027990_p29 replication initiation protein phrog_2562 replication initiation protein DNA, RNA and nucleotide metabolism 1 13693 14667
YP_009168543.1 NC_027990_p13 membrane protein phrog_16989 membrane protein moron, auxiliary metabolic gene and host takeover -1 8230 8598
YP_009168597.1 NC_027990_p67 hypothetical protein phrog_1661 unknown function unknown function 1 32734 33108
YP_009168566.1 NC_027990_p36 DNA methylase phrog_1071 DNA methyltransferase other 1 16950 17636
YP_009168584.1 NC_027990_p54 terminase small subunit phrog_509 terminase small subunit head and packaging 1 23662 24315
YP_009168537.1 NC_027990_p7 holin singleton unknown function unknown function 1 3422 3940
YP_009168589.1 NC_027990_p59 minor head protein phrog_324 head morphogenesis head and packaging 1 27917 28645
YP_009168578.1 NC_027990_p48 hypothetical protein singleton unknown function unknown function 1 21948 22124
YP_009168570.1 NC_027990_p40 hypothetical protein singleton unknown function unknown function 1 18344 18532
YP_009168586.1 NC_027990_p56 endonuclase phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 24778 25272
YP_009168593.1 NC_027990_p63 capsid protein phrog_264 major head protein head and packaging 1 30546 31424
YP_009168561.1 NC_027990_p31 hypothetical protein singleton unknown function unknown function 1 15978 16139
YP_009168532.1 NC_027990_p2 hypothetical protein singleton unknown function unknown function 1 1840 2250
YP_009168611.1 NC_027990_p81 hypothetical protein phrog_1264 unknown function unknown function 1 41870 42262
YP_009168614.1 NC_027990_p84 baseplate assembly protein phrog_120 baseplate wedge subunit tail 1 43856 44239
YP_009168598.1 NC_027990_p68 hypothetical protein phrog_1232 tail terminator connector 1 33123 33494
YP_009168594.1 NC_027990_p64 hypothetical protein phrog_1983 unknown function unknown function 1 31435 31797
YP_009168565.1 NC_027990_p35 hypothetical protein phrog_1945 unknown function unknown function 1 16708 16953
YP_009168615.1 NC_027990_p85 baseplate protein phrog_6 baseplate wedge subunit tail 1 44226 45404
YP_009168551.1 NC_027990_p21 hypothetical protein singleton unknown function unknown function 1 11016 11297
YP_009168613.1 NC_027990_p83 baseplate protein phrog_11 baseplate spike tail 1 43493 43837
YP_009168583.1 NC_027990_p53 hypothetical protein singleton unknown function unknown function 1 23271 23504
YP_009168590.1 NC_027990_p60 peptidoglycan hydrolase singleton unknown function unknown function 1 28668 28937
YP_009168546.1 NC_027990_p16 transcription regulator phrog_3 transcriptional repressor transcription regulation 1 9639 9896
YP_009168573.1 NC_027990_p43 hypothetical protein singleton unknown function unknown function 1 19037 19234
YP_009168574.1 NC_027990_p44 transcription regulator phrog_248 transcriptional activator transcription regulation 1 19459 19926
YP_009168557.1 NC_027990_p27 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 12574 13269
YP_009168553.1 NC_027990_p23 hypothetical protein singleton unknown function unknown function 1 11458 11574
YP_009168575.1 NC_027990_p45 DNA methylase phrog_67 DNA methyltransferase other 1 20375 21223
YP_009168538.1 NC_027990_p8 lyzozyme M1 phrog_291 endolysin lysis 1 3940 4911
YP_009168536.1 NC_027990_p6 hypothetical protein singleton unknown function unknown function 1 3048 3410
YP_009168616.1 NC_027990_p86 baseplate protein singleton baseplate protein tail 1 45394 45900
YP_009168541.1 NC_027990_p11 membrane protein phrog_12855 membrane protein moron, auxiliary metabolic gene and host takeover -1 6894 7520
YP_009168535.1 NC_027990_p5 hypothetical protein phrog_33324 unknown function unknown function 1 2621 3058
YP_009168549.1 NC_027990_p19 hypothetical protein singleton unknown function unknown function 1 10390 10500
YP_009168576.1 NC_027990_p46 hypothetical protein singleton unknown function unknown function 1 21236 21460
YP_009168539.1 NC_027990_p9 hypothetical protein singleton unknown function unknown function -1 5413 5574
YP_009168562.1 NC_027990_p32 hypothetical protein singleton unknown function unknown function 1 16139 16252
YP_009168587.1 NC_027990_p57 large terminase phrog_2 terminase large subunit head and packaging 1 25605 26438
YP_009168602.1 NC_027990_p72 hypothetical protein singleton unknown function unknown function 1 35500 35664
YP_009168610.1 NC_027990_p80 muramidase phrog_1517 endolysin lysis 1 41211 41858
YP_009168592.1 NC_027990_p62 hypothetical protein phrog_563 virion structural protein head and packaging 1 30067 30531
YP_009168580.1 NC_027990_p50 hypothetical protein singleton unknown function unknown function 1 22508 22981
YP_009168600.1 NC_027990_p70 hypothetical protein phrog_280 virion structural protein head and packaging 1 34640 35038
YP_009168548.1 NC_027990_p18 hypothetical protein phrog_6930 unknown function unknown function -1 10089 10304
YP_009168534.1 NC_027990_p4 hypothetical protein phrog_1382 unknown function unknown function 1 2396 2566
YP_009168554.1 NC_027990_p24 hypothetical protein singleton unknown function unknown function 1 11571 11867
YP_009168558.1 NC_027990_p28 single strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 13266 13649
YP_009168556.1 NC_027990_p26 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 12076 12561
YP_009168560.1 NC_027990_p30 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 15440 15988
YP_009168595.1 NC_027990_p65 hypothetical protein phrog_302 virion structural protein head and packaging 1 31809 32135
YP_009168531.1 NC_027990_p1 reverse transcriptase phrog_1423 Reverse transcriptase DNA, RNA and nucleotide metabolism 1 822 1886
YP_009168606.1 NC_027990_p76 hypothetical protein singleton unknown function unknown function 1 37983 38459
YP_009168552.1 NC_027990_p22 hypothetical protein singleton unknown function unknown function 1 11303 11461
YP_009168591.1 NC_027990_p61 head protein phrog_530 head maturation protease head and packaging 1 28949 30052
YP_009168604.1 NC_027990_p74 hypothetical protein singleton unknown function unknown function 1 36025 36423
YP_009168544.1 NC_027990_p14 receptor protein phrog_87 metallo-protease other -1 8699 9109
YP_009168550.1 NC_027990_p20 transcription regulator phrog_1124 transcriptional regulator transcription regulation 1 10514 11011
YP_009168588.1 NC_027990_p58 hypothetical protein phrog_146 portal protein head and packaging 1 26454 27815
YP_009168599.1 NC_027990_p69 structure protein phrog_205 tail sheath tail 1 33586 34593
YP_009168582.1 NC_027990_p52 hypothetical protein singleton unknown function unknown function 1 23093 23287
YP_009168607.1 NC_027990_p77 hypothetical protein singleton unknown function unknown function 1 38638 39042