Genomic map of Staphylococcus phage SA1 (NC_027991)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027991
Definition
Staphylococcus phage SA1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; unclassified Ounavirinae.
DB of origin
REFSEQ
Length
147303
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
109
%GC
45.82
Number of singletons
6
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009168622.1 NC_027991_p6 hypothetical protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 15861 16760
YP_009168717.1 NC_027991_p101 hypothetical protein phrog_4040 unknown function unknown function -1 140374 140718
YP_009168639.1 NC_027991_p23 phage conserved protein phrog_2143 unknown function unknown function 1 61381 61938
YP_009168721.1 NC_027991_p105 tail protein phrog_3995 tail protein tail -1 142306 143190
YP_009168702.1 NC_027991_p86 hypothetical protein phrog_3849 unknown function unknown function 1 126468 126779
YP_009168709.1 NC_027991_p93 hypothetical protein phrog_4318 unknown function unknown function 1 133937 134278
YP_009168698.1 NC_027991_p82 rIIB protein phrog_609 RIIB lysis inhibitor lysis 1 122735 123844
YP_009168618.1 NC_027991_p2 conserved tail assembly protein phrog_778 tail assembly protein tail 1 2115 2933
YP_009168628.1 NC_027991_p12 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 24133 26070
YP_009168697.1 NC_027991_p81 rIIA protein phrog_612 RIIA lysis inhibitor lysis 1 120289 122655
YP_009168620.1 NC_027991_p4 hypothetical protein phrog_7226 unknown function unknown function 1 12068 13903
YP_009168633.1 NC_027991_p17 capsid protein phrog_29 major head protein head and packaging -1 36262 37326
YP_009168645.1 NC_027991_p29 head maturation protease phrog_53 head maturation protease head and packaging 1 67672 69018
YP_009168668.1 NC_027991_p52 hypothetical protein phrog_4422 unknown function unknown function -1 88944 89459
YP_009168677.1 NC_027991_p61 hypothetical protein phrog_4251 minor tail protein tail 1 99119 99931
YP_009168706.1 NC_027991_p90 hypothetical protein phrog_4375 unknown function unknown function 1 131417 131749
YP_009168678.1 NC_027991_p62 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 99994 100737
YP_009168623.1 NC_027991_p7 hypothetical protein phrog_8098 unknown function unknown function -1 16750 17385
YP_009168626.1 NC_027991_p10 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 21976 23313
YP_009168680.1 NC_027991_p64 hypothetical protein phrog_3877 unknown function unknown function 1 103398 104255
YP_009168695.1 NC_027991_p79 nictotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 117932 119713
YP_009168653.1 NC_027991_p37 hypothetical protein phrog_280 virion structural protein head and packaging 1 73840 74286
YP_009168669.1 NC_027991_p53 hypothetical protein phrog_4116 unknown function unknown function -1 89473 89832
YP_009168687.1 NC_027991_p71 hypothetical protein phrog_2652 unknown function unknown function 1 109731 110072
YP_009168705.1 NC_027991_p89 hypothetical protein phrog_4190 unknown function unknown function 1 130523 131035
YP_009168724.1 NC_027991_p108 hypothetical protein phrog_4114 unknown function unknown function 1 144816 145187
YP_009168699.1 NC_027991_p83 phage conserved protein phrog_600 unknown function unknown function 1 123945 124493
YP_009168725.1 NC_027991_p109 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 145270 146685
YP_009168661.1 NC_027991_p45 phage conserved protein phrog_6 baseplate wedge subunit tail 1 80369 81838
YP_009168713.1 NC_027991_p97 hypothetical protein phrog_4343 unknown function unknown function -1 138460 138963
YP_009168715.1 NC_027991_p99 unknown singleton unknown function unknown function 1 139635 139979
YP_009168671.1 NC_027991_p55 hypothetical protein phrog_5926 unknown function unknown function -1 91233 91673
YP_009168708.1 NC_027991_p92 hypothetical protein phrog_3303 unknown function unknown function 1 133002 133544
YP_009168640.1 NC_027991_p24 hypothetical protein phrog_2114 unknown function unknown function 1 62390 63124
YP_009168627.1 NC_027991_p11 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 23368 23964
YP_009168679.1 NC_027991_p63 phage DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 100939 102924
YP_009168672.1 NC_027991_p56 hypothetical protein phrog_4652 unknown function unknown function -1 91676 92263
YP_009168641.1 NC_027991_p25 large subunit terminase phrog_979 terminase large subunit head and packaging 1 63743 65344
YP_009168712.1 NC_027991_p96 hypothetical protein phrog_4713 unknown function unknown function -1 137641 138105
YP_009168636.1 NC_027991_p20 phage terminase large subunit phrog_15 terminase large subunit head and packaging -1 41003 41881
YP_009168649.1 NC_027991_p33 phage conserved protein phrog_222 tail completion or Neck1 protein connector 1 71017 71499
YP_009168638.1 NC_027991_p22 oxidoreductase singleton unknown function unknown function -1 57676 58074
YP_009168673.1 NC_027991_p57 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 92691 93830
YP_009168651.1 NC_027991_p35 hypothetical protein phrog_4082 unknown function unknown function 1 71872 72471
YP_009168657.1 NC_027991_p41 hypothetical protein phrog_349 virion structural protein head and packaging 1 78010 78351
YP_009168675.1 NC_027991_p59 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 95739 98471
YP_009168621.1 NC_027991_p5 hypothetical protein phrog_873 endolysin head and packaging 1 14308 15021
YP_009168642.1 NC_027991_p26 hypothetical protein phrog_113 portal protein head and packaging 1 65362 66828
YP_009168663.1 NC_027991_p47 tail fiber protein phrog_2097 tail fiber protein tail 1 83003 84169
YP_009168682.1 NC_027991_p66 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 104318 105358
YP_009168630.1 NC_027991_p14 hypothetical protein phrog_807 major tail protein with Ig-like domain tail -1 33260 34399
YP_009168722.1 NC_027991_p106 hypothetical protein phrog_4463 unknown function unknown function -1 143187 143558
YP_009168632.1 NC_027991_p16 hypothetical protein singleton unknown function unknown function 1 36169 38172
YP_009168674.1 NC_027991_p58 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 95254 95757
YP_009168664.1 NC_027991_p48 tail fiber protein phrog_4277 tail fiber protein tail 1 84219 86558
YP_009168656.1 NC_027991_p40 phage conserved protein phrog_3721 unknown function unknown function 1 77213 78010
YP_009168684.1 NC_027991_p68 hypothetical protein phrog_2144 MazG-like pyrophosphatase other 1 106091 106846
YP_009168719.1 NC_027991_p103 hypothetical protein phrog_4266 unknown function unknown function -1 141392 141790
YP_009168690.1 NC_027991_p74 hypothetical protein phrog_4382 unknown function unknown function 1 114127 114522
YP_009168660.1 NC_027991_p44 phage conserved protein phrog_120 baseplate wedge subunit tail 1 79950 80369
YP_009168665.1 NC_027991_p49 hypothetical protein phrog_4038 unknown function unknown function 1 86832 87203
YP_009168617.1 NC_027991_p1 hypothetical protein phrog_1082 tail assembly protein tail 1 417 2105
YP_009168700.1 NC_027991_p84 hypothetical protein phrog_3970 polynucleotide kinase other 1 124471 125166
YP_009168710.1 NC_027991_p94 hypothetical protein phrog_4725 unknown function unknown function 1 134498 135028
YP_009168655.1 NC_027991_p39 phage conserved protein phrog_4036 tail length tape measure protein tail 1 75000 77213
YP_009168644.1 NC_027991_p28 hypothetical protein phrog_240 head protein head and packaging 1 67328 67660
YP_009168666.1 NC_027991_p50 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 87240 88139
YP_009168658.1 NC_027991_p42 hypothetical protein phrog_196 baseplate hub tail 1 78351 79181
YP_009168688.1 NC_027991_p72 ribonucleoside diphosphate reductase beta chain phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 110069 111142
YP_009168624.1 NC_027991_p8 primase singleton unknown function unknown function -1 18090 19070
YP_009168703.1 NC_027991_p87 phage conserved protein phrog_335 phosphatase other 1 127901 128686
YP_009168629.1 NC_027991_p13 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 26405 27880
YP_009168692.1 NC_027991_p76 hypothetical protein phrog_4462 unknown function unknown function 1 115835 116155
YP_009168637.1 NC_027991_p21 recombination-associated protein phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism -1 47798 48874
YP_009168631.1 NC_027991_p15 hypothetical protein phrog_27 tail completion or Neck1 protein connector -1 34913 35539
YP_009168718.1 NC_027991_p102 hypothetical protein phrog_4348 unknown function unknown function -1 141004 141399
YP_009168720.1 NC_027991_p104 lysin phrog_7 endolysin lysis -1 141842 142306
YP_009168650.1 NC_027991_p34 hypothetical protein phrog_2874 unknown function unknown function 1 71496 71897
YP_009168667.1 NC_027991_p51 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 88141 88686
YP_009168701.1 NC_027991_p85 hypothetical protein phrog_2267 unknown function unknown function 1 125178 125642
YP_009168696.1 NC_027991_p80 hypothetical protein phrog_4262 unknown function unknown function 1 119767 120102
YP_009168689.1 NC_027991_p73 anaerobic nucleoside diphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 111632 113776
YP_009168693.1 NC_027991_p77 hypothetical protein phrog_3500 unknown function unknown function 1 116207 116722
YP_009168646.1 NC_027991_p30 hypothetical protein phrog_4146 tail protease other 1 69030 69407
YP_009168694.1 NC_027991_p78 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 117005 117886
YP_009168704.1 NC_027991_p88 hypothetical protein phrog_4495 unknown function unknown function 1 129676 130056
YP_009168634.1 NC_027991_p18 prohead protease ClpP phrog_53 head maturation protease head and packaging -1 37749 39065
YP_009168619.1 NC_027991_p3 hypothetical protein phrog_21247 tail protein tail 1 3882 5456
YP_009168648.1 NC_027991_p32 hypothetical protein phrog_1732 unknown function unknown function 1 70568 71017
YP_009168714.1 NC_027991_p98 hypothetical protein phrog_5380 unknown function unknown function -1 139175 139720
YP_009168707.1 NC_027991_p91 hypothetical protein phrog_4327 unknown function unknown function 1 132198 132602
YP_009168686.1 NC_027991_p70 ribonucleoside triphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 107525 109759
YP_009168625.1 NC_027991_p9 primase singleton unknown function unknown function -1 19010 20674
YP_009168654.1 NC_027991_p38 hypothetical protein phrog_1613 tail assembly chaperone tail 1 74360 74758
YP_009168691.1 NC_027991_p75 anaerobic NTP reductase phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 114828 115313
YP_009168647.1 NC_027991_p31 major capsid protein phrog_29 major head protein head and packaging 1 69441 70547
YP_009168670.1 NC_027991_p54 hypothetical protein phrog_4332 unknown function unknown function -1 90340 90723
YP_009168652.1 NC_027991_p36 phage conserved structural protein phrog_205 tail sheath tail 1 72472 73824
YP_009168723.1 NC_027991_p107 hypothetical protein phrog_4034 unknown function unknown function -1 143606 144196
YP_009168716.1 NC_027991_p100 hypothetical protein phrog_4109 unknown function unknown function -1 139793 140374
YP_009168685.1 NC_027991_p69 hypothetical protein phrog_4007 unknown function unknown function 1 106827 107150
YP_009168711.1 NC_027991_p95 hypothetical protein phrog_4330 unknown function unknown function -1 137079 137627
YP_009168681.1 NC_027991_p65 hypothetical protein singleton unknown function unknown function -1 103794 104165
YP_009168635.1 NC_027991_p19 phage portal protein phrog_21 portal protein head and packaging -1 39062 40741
YP_009168662.1 NC_027991_p46 hypothetical protein phrog_4017 baseplate protein tail 1 81841 82698
YP_009168643.1 NC_027991_p27 hypothetical protein phrog_3977 unknown function unknown function 1 66828 67328
YP_009168659.1 NC_027991_p43 baseplate protein phrog_11 baseplate spike tail 1 79327 79950
YP_009168683.1 NC_027991_p67 hypothetical protein phrog_447 NAD synthetase other 1 105348 105845
YP_009168676.1 NC_027991_p60 hypothetical protein phrog_4039 unknown function unknown function 1 98695 99117