| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_027994 |
Definition |
Escherichia phage K1H, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus. |
DB of origin |
REFSEQ |
Length |
41632 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
51.16 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009168860.1 | NC_027994_p28 | tailspike 63D sialidase | phrog_1171 | tail spike protein | tail | 1 | 20181 | 23135 |
| YP_009168880.1 | NC_027994_p48 | endolysin | phrog_7 | endolysin | lysis | 1 | 38427 | 38915 |
| YP_009168873.1 | NC_027994_p41 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 31812 | 32027 |
| YP_009168876.1 | NC_027994_p44 | hypothetical protein | phrog_6094 | unknown function | unknown function | 1 | 36759 | 37307 |
| YP_009168877.1 | NC_027994_p45 | hypothetical protein | phrog_9632 | unknown function | unknown function | 1 | 37507 | 37800 |
| YP_009168870.1 | NC_027994_p38 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 29605 | 30855 |
| YP_009168839.1 | NC_027994_p7 | spanin | phrog_1267 | Rz-like spanin | lysis | 1 | 5070 | 5333 |
| YP_009168875.1 | NC_027994_p43 | hypothetical protein | phrog_5169 | unknown function | unknown function | -1 | 34371 | 34646 |
| YP_009168841.1 | NC_027994_p9 | major capsid protein | phrog_247 | major head protein | head and packaging | 1 | 6046 | 7014 |
| YP_009168865.1 | NC_027994_p33 | Mte8-like protein | phrog_1008 | DNA methyltransferase | other | -1 | 25016 | 25708 |
| YP_009168851.1 | NC_027994_p19 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 11478 | 12608 |
| YP_009168881.1 | NC_027994_p49 | hypothetical protein | phrog_9023 | unknown function | unknown function | 1 | 39575 | 39823 |
| YP_009168871.1 | NC_027994_p39 | hypothetical protein | phrog_4965 | unknown function | unknown function | -1 | 30852 | 31124 |
| YP_009168840.1 | NC_027994_p8 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 5362 | 6039 |
| YP_009168869.1 | NC_027994_p37 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 28892 | 29518 |
| YP_009168844.1 | NC_027994_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7758 | 7985 |
| YP_009168836.1 | NC_027994_p4 | head protein, SPP1family | phrog_241 | head morphogenesis | head and packaging | 1 | 2793 | 3869 |
| YP_009168857.1 | NC_027994_p25 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 16745 | 17260 |
| YP_009168854.1 | NC_027994_p22 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 13165 | 13581 |
| YP_009168879.1 | NC_027994_p47 | holin-like, class I | phrog_2508 | holin | lysis | 1 | 38177 | 38449 |
| YP_009168846.1 | NC_027994_p14 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 8080 | 8439 |
| YP_009168833.1 | NC_027994_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 1 | 4 |
| YP_009168833.1 | NC_027994_p1 | hypothetical protein | phrog_3064 | terminase | head and packaging | 1 | 41049 | 41632 |
| YP_009168858.1 | NC_027994_p26 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 17257 | 17622 |
| YP_009168872.1 | NC_027994_p40 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 31168 | 31686 |
| YP_009168864.1 | NC_027994_p32 | C-specific methylase | phrog_363 | DNA methyltransferase | other | -1 | 24972 | 25796 |
| YP_009168856.1 | NC_027994_p24 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 16248 | 16748 |
| YP_009168878.1 | NC_027994_p46 | holin-like, class II | phrog_2359 | holin | lysis | 1 | 37876 | 38184 |
| YP_009168834.1 | NC_027994_p2 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1 | 1251 |
| YP_009168838.1 | NC_027994_p6 | spanin | phrog_2536 | Rz-like spanin | lysis | 1 | 4838 | 5224 |
| YP_009168845.1 | NC_027994_p13 | tail protein | phrog_17193 | tail completion or Neck1 protein | connector | 1 | 8080 | 8831 |
| YP_009168863.1 | NC_027994_p31 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 23546 | 24979 |
| YP_009168849.1 | NC_027994_p17 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 10442 | 10996 |
| YP_009168835.1 | NC_027994_p3 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 1263 | 2756 |
| YP_009168861.1 | NC_027994_p29 | hypothetical protein | phrog_13851 | unknown function | unknown function | -1 | 23164 | 23367 |
| YP_009168882.1 | NC_027994_p50 | hypothetical protein | phrog_268 | unknown function | unknown function | 1 | 40477 | 40713 |
| YP_009168843.1 | NC_027994_p11 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7243 | 7755 |
| YP_009168868.1 | NC_027994_p36 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 26652 | 28832 |
| YP_009168866.1 | NC_027994_p34 | hypothetical protein | phrog_4879 | unknown function | unknown function | -1 | 25793 | 25984 |
| YP_009168867.1 | NC_027994_p35 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26015 | 26314 |
| YP_009168862.1 | NC_027994_p30 | hypothetical protein | phrog_27617 | unknown function | unknown function | -1 | 23364 | 23549 |
| YP_009168852.1 | NC_027994_p20 | hypothetical protein | phrog_14165 | unknown function | unknown function | -1 | 12674 | 13000 |
| YP_009168848.1 | NC_027994_p16 | tail protein | phrog_290 | minor tail protein | tail | 1 | 9247 | 10413 |
| YP_009168859.1 | NC_027994_p27 | tail protein | phrog_469 | tail protein | tail | 1 | 17613 | 20168 |
| YP_009168855.1 | NC_027994_p23 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 13936 | 16248 |
| YP_009168837.1 | NC_027994_p5 | tail protein | phrog_3945 | Hoc-like head decoration | head and packaging | 1 | 3869 | 4330 |
| YP_009168853.1 | NC_027994_p21 | hypothetical protein | phrog_15027 | tail assembly chaperone | tail | 1 | 13165 | 13943 |
| YP_009168847.1 | NC_027994_p15 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 8831 | 9244 |
| YP_009168842.1 | NC_027994_p10 | hypothetical protein | phrog_16180 | unknown function | unknown function | 1 | 7072 | 7239 |
| YP_009168850.1 | NC_027994_p18 | kinase-phosphatase | phrog_415 | polynucleotide kinase | other | -1 | 10996 | 11481 |
| YP_009168874.1 | NC_027994_p42 | helicase-primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 32045 | 34312 |