Genomic map of Escherichia phage K1-dep(1) (NC_027994)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_027994
Definition
Escherichia phage K1H, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Kagunavirus.
DB of origin
REFSEQ
Length
41632
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
50
%GC
51.16
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009168860.1 NC_027994_p28 tailspike 63D sialidase phrog_1171 tail spike protein tail 1 20181 23135
YP_009168880.1 NC_027994_p48 endolysin phrog_7 endolysin lysis 1 38427 38915
YP_009168873.1 NC_027994_p41 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 31812 32027
YP_009168876.1 NC_027994_p44 hypothetical protein phrog_6094 unknown function unknown function 1 36759 37307
YP_009168877.1 NC_027994_p45 hypothetical protein phrog_9632 unknown function unknown function 1 37507 37800
YP_009168870.1 NC_027994_p38 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 29605 30855
YP_009168839.1 NC_027994_p7 spanin phrog_1267 Rz-like spanin lysis 1 5070 5333
YP_009168875.1 NC_027994_p43 hypothetical protein phrog_5169 unknown function unknown function -1 34371 34646
YP_009168841.1 NC_027994_p9 major capsid protein phrog_247 major head protein head and packaging 1 6046 7014
YP_009168865.1 NC_027994_p33 Mte8-like protein phrog_1008 DNA methyltransferase other -1 25016 25708
YP_009168851.1 NC_027994_p19 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 11478 12608
YP_009168881.1 NC_027994_p49 hypothetical protein phrog_9023 unknown function unknown function 1 39575 39823
YP_009168871.1 NC_027994_p39 hypothetical protein phrog_4965 unknown function unknown function -1 30852 31124
YP_009168840.1 NC_027994_p8 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 5362 6039
YP_009168869.1 NC_027994_p37 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 28892 29518
YP_009168844.1 NC_027994_p12 hypothetical protein singleton unknown function unknown function 1 7758 7985
YP_009168836.1 NC_027994_p4 head protein, SPP1family phrog_241 head morphogenesis head and packaging 1 2793 3869
YP_009168857.1 NC_027994_p25 hypothetical protein phrog_396 minor tail protein tail 1 16745 17260
YP_009168854.1 NC_027994_p22 hypothetical protein phrog_313 Tail assembly chaperone tail 1 13165 13581
YP_009168879.1 NC_027994_p47 holin-like, class I phrog_2508 holin lysis 1 38177 38449
YP_009168846.1 NC_027994_p14 hypothetical protein phrog_161 head closure Hc1 connector 1 8080 8439
YP_009168833.1 NC_027994_p1 hypothetical protein phrog_3064 terminase head and packaging 1 1 4
YP_009168833.1 NC_027994_p1 hypothetical protein phrog_3064 terminase head and packaging 1 41049 41632
YP_009168858.1 NC_027994_p26 hypothetical protein phrog_329 minor tail protein tail 1 17257 17622
YP_009168872.1 NC_027994_p40 hypothetical protein phrog_3127 unknown function unknown function -1 31168 31686
YP_009168864.1 NC_027994_p32 C-specific methylase phrog_363 DNA methyltransferase other -1 24972 25796
YP_009168856.1 NC_027994_p24 hypothetical protein phrog_384 virion structural protein head and packaging 1 16248 16748
YP_009168878.1 NC_027994_p46 holin-like, class II phrog_2359 holin lysis 1 37876 38184
YP_009168834.1 NC_027994_p2 terminase phrog_2 terminase large subunit head and packaging 1 1 1251
YP_009168838.1 NC_027994_p6 spanin phrog_2536 Rz-like spanin lysis 1 4838 5224
YP_009168845.1 NC_027994_p13 tail protein phrog_17193 tail completion or Neck1 protein connector 1 8080 8831
YP_009168863.1 NC_027994_p31 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 23546 24979
YP_009168849.1 NC_027994_p17 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 10442 10996
YP_009168835.1 NC_027994_p3 structural protein phrog_145 portal protein head and packaging 1 1263 2756
YP_009168861.1 NC_027994_p29 hypothetical protein phrog_13851 unknown function unknown function -1 23164 23367
YP_009168882.1 NC_027994_p50 hypothetical protein phrog_268 unknown function unknown function 1 40477 40713
YP_009168843.1 NC_027994_p11 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7243 7755
YP_009168868.1 NC_027994_p36 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 26652 28832
YP_009168866.1 NC_027994_p34 hypothetical protein phrog_4879 unknown function unknown function -1 25793 25984
YP_009168867.1 NC_027994_p35 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 26015 26314
YP_009168862.1 NC_027994_p30 hypothetical protein phrog_27617 unknown function unknown function -1 23364 23549
YP_009168852.1 NC_027994_p20 hypothetical protein phrog_14165 unknown function unknown function -1 12674 13000
YP_009168848.1 NC_027994_p16 tail protein phrog_290 minor tail protein tail 1 9247 10413
YP_009168859.1 NC_027994_p27 tail protein phrog_469 tail protein tail 1 17613 20168
YP_009168855.1 NC_027994_p23 tape measure protein phrog_1538 tail length tape measure protein tail 1 13936 16248
YP_009168837.1 NC_027994_p5 tail protein phrog_3945 Hoc-like head decoration head and packaging 1 3869 4330
YP_009168853.1 NC_027994_p21 hypothetical protein phrog_15027 tail assembly chaperone tail 1 13165 13943
YP_009168847.1 NC_027994_p15 hypothetical protein phrog_179 tail terminator connector 1 8831 9244
YP_009168842.1 NC_027994_p10 hypothetical protein phrog_16180 unknown function unknown function 1 7072 7239
YP_009168850.1 NC_027994_p18 kinase-phosphatase phrog_415 polynucleotide kinase other -1 10996 11481
YP_009168874.1 NC_027994_p42 helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 32045 34312