Genomic map of Citrobacter phage Michonne (NC_028247)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028247
Definition
Citrobacter phage Michonne, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Mooglevirus; unclassified Mooglevirus.
DB of origin
REFSEQ
Length
90000
Host Name
Citrobacter freundii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
143
%GC
38.84
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009177323.1 NC_028247_p76 hypothetical protein phrog_222 tail completion or Neck1 protein connector -1 50366 50848
YP_009177316.1 NC_028247_p69 tail length tape-measure protein phrog_4036 tail length tape measure protein tail -1 44637 46865
YP_009177377.1 NC_028247_p130 hypothetical protein phrog_5293 unknown function unknown function -1 83470 83676
YP_009177252.1 NC_028247_p5 nictotinamide phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other -1 3201 5018
YP_009177379.1 NC_028247_p132 hypothetical protein phrog_335 phosphatase other -1 84180 84974
YP_009177320.1 NC_028247_p73 structural protein phrog_205 tail sheath tail -1 48041 49393
YP_009177352.1 NC_028247_p105 hypothetical protein phrog_6279 unknown function unknown function 1 72370 72462
YP_009177292.1 NC_028247_p45 hypothetical protein phrog_20095 unknown function unknown function 1 29128 29226
YP_009177282.1 NC_028247_p35 hypothetical protein phrog_4039 unknown function unknown function -1 23720 24160
YP_009177373.1 NC_028247_p126 hypothetical protein phrog_4190 unknown function unknown function -1 81624 82136
YP_009177374.1 NC_028247_p127 hypothetical protein phrog_5089 unknown function unknown function -1 82223 82480
YP_009177264.1 NC_028247_p17 hypothetical protein phrog_4532 unknown function unknown function -1 11297 11497
YP_009177341.1 NC_028247_p94 hypothetical protein phrog_4463 unknown function unknown function 1 67108 67476
YP_009177365.1 NC_028247_p118 hypothetical protein phrog_15633 unknown function unknown function -1 78508 78705
YP_009177362.1 NC_028247_p115 hypothetical protein phrog_7482 unknown function unknown function -1 77423 77563
YP_009177303.1 NC_028247_p56 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 33622 34521
YP_009177372.1 NC_028247_p125 hypothetical protein phrog_4401 unknown function unknown function -1 81239 81535
YP_009177357.1 NC_028247_p110 hypothetical protein phrog_4330 unknown function unknown function 1 73924 74589
YP_009177266.1 NC_028247_p19 ribonucleoside triphosphate reductase small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 11732 12805
YP_009177388.1 NC_028247_p141 polynucleotide kinase phrog_3970 polynucleotide kinase other -1 87477 88172
YP_009177367.1 NC_028247_p120 hypothetical protein phrog_3303 unknown function unknown function -1 79088 79645
YP_009177330.1 NC_028247_p83 hypothetical protein phrog_113 portal protein head and packaging -1 55038 56504
YP_009177356.1 NC_028247_p109 hypothetical protein phrog_4713 unknown function unknown function 1 73439 73915
YP_009177390.1 NC_028247_p143 rIIB protein phrog_609 RIIB lysis inhibitor lysis -1 88800 89921
YP_009177339.1 NC_028247_p92 hypothetical protein phrog_5064 unknown function unknown function 1 66246 66479
YP_009177338.1 NC_028247_p91 hypothetical protein phrog_8138 unknown function unknown function 1 66103 66264
YP_009177353.1 NC_028247_p106 hypothetical protein phrog_4457 unknown function unknown function 1 72459 72668
YP_009177280.1 NC_028247_p33 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 22145 22885
YP_009177307.1 NC_028247_p60 tail fiber protein phrog_2097 tail fiber protein tail -1 37620 38828
YP_009177331.1 NC_028247_p84 terminase large subunit phrog_979 terminase large subunit head and packaging -1 56517 58118
YP_009177325.1 NC_028247_p78 major capsid protein phrog_29 major head protein head and packaging -1 51320 52423
YP_009177251.1 NC_028247_p4 hypothetical protein phrog_2375 unknown function unknown function -1 2929 3147
YP_009177297.1 NC_028247_p50 transcriptional regulatory protein phrog_1373 transcriptional regulator transcription regulation 1 31144 31443
YP_009177386.1 NC_028247_p139 i-spanin phrog_1152 Rz-like spanin lysis -1 86601 86948
YP_009177269.1 NC_028247_p22 hypothetical protein phrog_3358 unknown function unknown function -1 15419 15754
YP_009177315.1 NC_028247_p68 hypothetical protein phrog_3721 unknown function unknown function -1 43831 44637
YP_009177350.1 NC_028247_p103 hypothetical protein phrog_4459 unknown function unknown function 1 71667 71885
YP_009177256.1 NC_028247_p9 hypothetical protein phrog_4462 unknown function unknown function -1 6794 7105
YP_009177283.1 NC_028247_p36 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 24420 27119
YP_009177291.1 NC_028247_p44 hypothetical protein phrog_4427 unknown function unknown function 1 28925 29131
YP_009177265.1 NC_028247_p18 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 11490 11732
YP_009177295.1 NC_028247_p48 hypothetical protein phrog_4332 unknown function unknown function 1 30565 30945
YP_009177312.1 NC_028247_p65 hypothetical protein phrog_11 baseplate spike tail -1 41875 42516
YP_009177346.1 NC_028247_p99 hypothetical protein phrog_4385 unknown function unknown function 1 69661 69954
YP_009177369.1 NC_028247_p122 hypothetical protein phrog_4327 unknown function unknown function -1 80064 80471
YP_009177328.1 NC_028247_p81 hypothetical protein phrog_240 head protein head and packaging -1 54206 54538
YP_009177333.1 NC_028247_p86 hypothetical protein phrog_2114 unknown function unknown function -1 58740 59474
YP_009177310.1 NC_028247_p63 basplate assembly protein phrog_6 baseplate wedge subunit tail -1 39990 41459
YP_009177363.1 NC_028247_p116 hypothetical protein phrog_4318 unknown function unknown function -1 77761 78102
YP_009177290.1 NC_028247_p43 hypothetical protein phrog_902 unknown function unknown function 1 28678 28914
YP_009177344.1 NC_028247_p97 hypothetical protein phrog_4266 unknown function unknown function 1 68885 69283
YP_009177381.1 NC_028247_p134 hypothetical protein phrog_6082 unknown function unknown function -1 85169 85405
YP_009177324.1 NC_028247_p77 hypothetical protein phrog_1732 unknown function unknown function -1 50848 51297
YP_009177262.1 NC_028247_p15 hypothetical protein phrog_24391 unknown function unknown function -1 8859 9041
YP_009177286.1 NC_028247_p39 hypothetical protein phrog_5180 unknown function unknown function 1 27899 28108
YP_009177358.1 NC_028247_p111 hypothetical protein singleton unknown function unknown function -1 75015 75215
YP_009177375.1 NC_028247_p128 hypothetical protein phrog_5089 unknown function unknown function -1 82653 82910
YP_009177351.1 NC_028247_p104 hypothetical protein phrog_4343 unknown function unknown function 1 71882 72388
YP_009177360.1 NC_028247_p113 hypothetical protein phrog_7022 unknown function unknown function -1 76506 76769
YP_009177383.1 NC_028247_p136 hypothetical protein phrog_25740 unknown function unknown function -1 85716 86168
YP_009177281.1 NC_028247_p34 hypothetical protein phrog_4251 minor tail protein tail -1 22942 23736
YP_009177270.1 NC_028247_p23 hypothetical protein phrog_4007 unknown function unknown function -1 15747 16073
YP_009177327.1 NC_028247_p80 head maturation protease phrog_53 head maturation protease head and packaging -1 52845 54194
YP_009177293.1 NC_028247_p46 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 29223 30323
YP_009177345.1 NC_028247_p98 hypothetical protein phrog_4348 unknown function unknown function 1 69276 69659
YP_009177370.1 NC_028247_p123 hypothetical protein phrog_3436 unknown function unknown function -1 80561 80833
YP_009177311.1 NC_028247_p64 hypothetical protein phrog_120 baseplate wedge subunit tail -1 41459 41875
YP_009177334.1 NC_028247_p87 hypothetical protein phrog_10765 unknown function unknown function -1 59956 60168
YP_009177314.1 NC_028247_p67 hypothetical protein phrog_349 virion structural protein head and packaging -1 43490 43831
YP_009177380.1 NC_028247_p133 hypothetical protein phrog_2210 unknown function unknown function -1 84976 85176
YP_009177318.1 NC_028247_p71 tape-measure chaperone phrog_1613 tail assembly chaperone tail -1 47101 47502
YP_009177250.1 NC_028247_p3 hypothetical protein phrog_4262 unknown function unknown function -1 2597 2932
YP_009177296.1 NC_028247_p49 hypothetical protein phrog_4473 unknown function unknown function 1 30948 31151
YP_009177287.1 NC_028247_p40 hypothetical protein phrog_3474 unknown function unknown function 1 28105 28308
YP_009177317.1 NC_028247_p70 tape-measure chaperone phrog_3840 tail assembly chaperone tail -1 46865 47502
YP_009177371.1 NC_028247_p124 hypothetical protein phrog_4375 unknown function unknown function -1 80898 81245
YP_009177342.1 NC_028247_p95 tail protein phrog_3995 tail protein tail 1 67473 68369
YP_009177272.1 NC_028247_p25 hypothetical protein phrog_4442 unknown function unknown function -1 16809 17024
YP_009177364.1 NC_028247_p117 hypothetical protein phrog_10118 unknown function unknown function -1 78199 78420
YP_009177260.1 NC_028247_p13 hypothetical protein phrog_4382 unknown function unknown function -1 8116 8508
YP_009177277.1 NC_028247_p30 hypothetical protein phrog_4982 unknown function unknown function -1 19704 19982
YP_009177309.1 NC_028247_p62 hypothetical protein phrog_4017 baseplate protein tail -1 39130 39987
YP_009177385.1 NC_028247_p138 o-spanin phrog_4180 unknown function unknown function -1 86438 86707
YP_009177343.1 NC_028247_p96 lysozyme phrog_7 endolysin lysis 1 68369 68833
YP_009177276.1 NC_028247_p29 hypothetical protein phrog_4424 unknown function unknown function -1 19570 19707
YP_009177271.1 NC_028247_p24 hypothetical protein phrog_2144 MazG-like pyrophosphatase other -1 16054 16809
YP_009177329.1 NC_028247_p82 hypothetical protein phrog_3977 unknown function unknown function -1 54538 55038
YP_009177368.1 NC_028247_p121 hypothetical protein phrog_9030 unknown function unknown function -1 79730 79978
YP_009177376.1 NC_028247_p129 hypothetical protein phrog_4495 unknown function unknown function -1 83002 83382
YP_009177355.1 NC_028247_p108 hypothetical protein phrog_9967 unknown function unknown function 1 73159 73452
YP_009177300.1 NC_028247_p53 hypothetical protein phrog_4422 unknown function unknown function 1 32294 32809
YP_009177273.1 NC_028247_p26 HNH homing endonuclease phrog_447 NAD synthetase other -1 17026 17526
YP_009177289.1 NC_028247_p42 hypothetical protein phrog_9065 unknown function unknown function 1 28416 28667
YP_009177305.1 NC_028247_p58 hypothetical protein phrog_402 unknown function unknown function -1 34933 35127
YP_009177389.1 NC_028247_p142 hypothetical protein phrog_600 unknown function unknown function -1 88150 88698
YP_009177359.1 NC_028247_p112 hypothetical protein phrog_4559 unknown function unknown function -1 76192 76443
YP_009177254.1 NC_028247_p7 hypothetical protein phrog_4726 unknown function unknown function -1 5955 6233
YP_009177332.1 NC_028247_p85 hypothetical protein phrog_4397 unknown function unknown function -1 58140 58346
YP_009177257.1 NC_028247_p10 hypothetical protein phrog_4425 unknown function unknown function -1 7117 7374
YP_009177261.1 NC_028247_p14 hypothetical protein phrog_8826 unknown function unknown function -1 8599 8862
YP_009177384.1 NC_028247_p137 hypothetical protein phrog_4391 unknown function unknown function -1 86172 86441
YP_009177337.1 NC_028247_p90 hypothetical protein phrog_4114 unknown function unknown function -1 65482 65853
YP_009177255.1 NC_028247_p8 hypothetical protein phrog_3500 unknown function unknown function -1 6226 6741
YP_009177326.1 NC_028247_p79 hypothetical protein phrog_4146 tail protease other -1 52455 52832
YP_009177349.1 NC_028247_p102 hypothetical protein phrog_5380 unknown function unknown function 1 70954 71670
YP_009177321.1 NC_028247_p74 hypothetical protein phrog_4082 unknown function unknown function -1 49394 49993
YP_009177258.1 NC_028247_p11 hypothetical protein phrog_5082 unknown function unknown function -1 7390 7668
YP_009177313.1 NC_028247_p66 hypothetical protein phrog_196 baseplate hub tail -1 42513 43490
YP_009177366.1 NC_028247_p119 hypothetical protein phrog_4640 unknown function unknown function -1 78796 79026
YP_009177322.1 NC_028247_p75 hypothetical protein phrog_2874 unknown function unknown function -1 49968 50369
YP_009177299.1 NC_028247_p52 hypothetical protein phrog_9143 unknown function unknown function 1 31789 32292
YP_009177306.1 NC_028247_p59 tail fiber protein phrog_4277 tail fiber protein tail -1 35214 37574
YP_009177259.1 NC_028247_p12 anaerobic NTP reductase small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism -1 7631 8116
YP_009177308.1 NC_028247_p61 hypothetical protein phrog_4141 unknown function unknown function -1 38831 39130
YP_009177288.1 NC_028247_p41 hypothetical protein phrog_2381 unknown function unknown function 1 28283 28426
YP_009177382.1 NC_028247_p135 hypothetical protein phrog_4453 unknown function unknown function -1 85380 85706
YP_009177253.1 NC_028247_p6 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 5063 5944
YP_009177279.1 NC_028247_p32 hypothetical protein phrog_4469 unknown function unknown function -1 21941 22135
YP_009177378.1 NC_028247_p131 hypothetical protein phrog_15689 unknown function unknown function 1 83898 84086
YP_009177319.1 NC_028247_p72 hypothetical protein phrog_280 virion structural protein head and packaging -1 47579 48025
YP_009177335.1 NC_028247_p88 HNH endonuclease phrog_10822 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60841 61293
YP_009177301.1 NC_028247_p54 hypothetical protein phrog_2993 unknown function unknown function 1 32806 33078
YP_009177248.1 NC_028247_p1 rIIA protein phrog_612 RIIA lysis inhibitor lysis -1 1 2373
YP_009177340.1 NC_028247_p93 hypothetical protein phrog_4034 unknown function unknown function 1 66473 67063
YP_009177347.1 NC_028247_p100 hypothetical protein phrog_4040 unknown function unknown function 1 69947 70291
YP_009177304.1 NC_028247_p57 holin phrog_4038 unknown function unknown function -1 34559 34933
YP_009177302.1 NC_028247_p55 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 33075 33620
YP_009177354.1 NC_028247_p107 hypothetical protein phrog_7193 unknown function unknown function 1 72713 73156
YP_009177267.1 NC_028247_p20 hypothetical protein phrog_2652 unknown function unknown function -1 12802 13077
YP_009177294.1 NC_028247_p47 hypothetical protein singleton unknown function unknown function 1 30332 30481
YP_009177268.1 NC_028247_p21 ribonucleoside triphosphate reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 13133 15367
YP_009177285.1 NC_028247_p38 hypothetical protein phrog_4230 unknown function unknown function 1 27684 27902
YP_009177387.1 NC_028247_p140 hypothetical protein phrog_2267 unknown function unknown function -1 87001 87465
YP_009177263.1 NC_028247_p16 anaerobic nucleoside reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 9106 11247
YP_009177275.1 NC_028247_p28 hypothetical protein phrog_3877 unknown function unknown function -1 18620 19483
YP_009177284.1 NC_028247_p37 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27119 27631
YP_009177298.1 NC_028247_p51 hypothetical protein phrog_4116 unknown function unknown function 1 31445 31804
YP_009177361.1 NC_028247_p114 hypothetical protein phrog_4725 unknown function unknown function -1 76830 77357
YP_009177274.1 NC_028247_p27 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 17516 18556
YP_009177348.1 NC_028247_p101 hypothetical protein phrog_4109 unknown function unknown function 1 70293 70883
YP_009177336.1 NC_028247_p89 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism -1 63990 65405
YP_009177278.1 NC_028247_p31 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 19957 21948
YP_009177249.1 NC_028247_p2 hypothetical protein phrog_3931 unknown function unknown function -1 2436 2615