| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028247 |
Definition |
Citrobacter phage Michonne, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Mooglevirus; unclassified Mooglevirus. |
DB of origin |
REFSEQ |
Length |
90000 |
Host Name |
Citrobacter freundii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
143 |
%GC |
38.84 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009177323.1 | NC_028247_p76 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | -1 | 50366 | 50848 |
| YP_009177316.1 | NC_028247_p69 | tail length tape-measure protein | phrog_4036 | tail length tape measure protein | tail | -1 | 44637 | 46865 |
| YP_009177377.1 | NC_028247_p130 | hypothetical protein | phrog_5293 | unknown function | unknown function | -1 | 83470 | 83676 |
| YP_009177252.1 | NC_028247_p5 | nictotinamide phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | -1 | 3201 | 5018 |
| YP_009177379.1 | NC_028247_p132 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 84180 | 84974 |
| YP_009177320.1 | NC_028247_p73 | structural protein | phrog_205 | tail sheath | tail | -1 | 48041 | 49393 |
| YP_009177352.1 | NC_028247_p105 | hypothetical protein | phrog_6279 | unknown function | unknown function | 1 | 72370 | 72462 |
| YP_009177292.1 | NC_028247_p45 | hypothetical protein | phrog_20095 | unknown function | unknown function | 1 | 29128 | 29226 |
| YP_009177282.1 | NC_028247_p35 | hypothetical protein | phrog_4039 | unknown function | unknown function | -1 | 23720 | 24160 |
| YP_009177373.1 | NC_028247_p126 | hypothetical protein | phrog_4190 | unknown function | unknown function | -1 | 81624 | 82136 |
| YP_009177374.1 | NC_028247_p127 | hypothetical protein | phrog_5089 | unknown function | unknown function | -1 | 82223 | 82480 |
| YP_009177264.1 | NC_028247_p17 | hypothetical protein | phrog_4532 | unknown function | unknown function | -1 | 11297 | 11497 |
| YP_009177341.1 | NC_028247_p94 | hypothetical protein | phrog_4463 | unknown function | unknown function | 1 | 67108 | 67476 |
| YP_009177365.1 | NC_028247_p118 | hypothetical protein | phrog_15633 | unknown function | unknown function | -1 | 78508 | 78705 |
| YP_009177362.1 | NC_028247_p115 | hypothetical protein | phrog_7482 | unknown function | unknown function | -1 | 77423 | 77563 |
| YP_009177303.1 | NC_028247_p56 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 33622 | 34521 |
| YP_009177372.1 | NC_028247_p125 | hypothetical protein | phrog_4401 | unknown function | unknown function | -1 | 81239 | 81535 |
| YP_009177357.1 | NC_028247_p110 | hypothetical protein | phrog_4330 | unknown function | unknown function | 1 | 73924 | 74589 |
| YP_009177266.1 | NC_028247_p19 | ribonucleoside triphosphate reductase small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 11732 | 12805 |
| YP_009177388.1 | NC_028247_p141 | polynucleotide kinase | phrog_3970 | polynucleotide kinase | other | -1 | 87477 | 88172 |
| YP_009177367.1 | NC_028247_p120 | hypothetical protein | phrog_3303 | unknown function | unknown function | -1 | 79088 | 79645 |
| YP_009177330.1 | NC_028247_p83 | hypothetical protein | phrog_113 | portal protein | head and packaging | -1 | 55038 | 56504 |
| YP_009177356.1 | NC_028247_p109 | hypothetical protein | phrog_4713 | unknown function | unknown function | 1 | 73439 | 73915 |
| YP_009177390.1 | NC_028247_p143 | rIIB protein | phrog_609 | RIIB lysis inhibitor | lysis | -1 | 88800 | 89921 |
| YP_009177339.1 | NC_028247_p92 | hypothetical protein | phrog_5064 | unknown function | unknown function | 1 | 66246 | 66479 |
| YP_009177338.1 | NC_028247_p91 | hypothetical protein | phrog_8138 | unknown function | unknown function | 1 | 66103 | 66264 |
| YP_009177353.1 | NC_028247_p106 | hypothetical protein | phrog_4457 | unknown function | unknown function | 1 | 72459 | 72668 |
| YP_009177280.1 | NC_028247_p33 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 22145 | 22885 |
| YP_009177307.1 | NC_028247_p60 | tail fiber protein | phrog_2097 | tail fiber protein | tail | -1 | 37620 | 38828 |
| YP_009177331.1 | NC_028247_p84 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | -1 | 56517 | 58118 |
| YP_009177325.1 | NC_028247_p78 | major capsid protein | phrog_29 | major head protein | head and packaging | -1 | 51320 | 52423 |
| YP_009177251.1 | NC_028247_p4 | hypothetical protein | phrog_2375 | unknown function | unknown function | -1 | 2929 | 3147 |
| YP_009177297.1 | NC_028247_p50 | transcriptional regulatory protein | phrog_1373 | transcriptional regulator | transcription regulation | 1 | 31144 | 31443 |
| YP_009177386.1 | NC_028247_p139 | i-spanin | phrog_1152 | Rz-like spanin | lysis | -1 | 86601 | 86948 |
| YP_009177269.1 | NC_028247_p22 | hypothetical protein | phrog_3358 | unknown function | unknown function | -1 | 15419 | 15754 |
| YP_009177315.1 | NC_028247_p68 | hypothetical protein | phrog_3721 | unknown function | unknown function | -1 | 43831 | 44637 |
| YP_009177350.1 | NC_028247_p103 | hypothetical protein | phrog_4459 | unknown function | unknown function | 1 | 71667 | 71885 |
| YP_009177256.1 | NC_028247_p9 | hypothetical protein | phrog_4462 | unknown function | unknown function | -1 | 6794 | 7105 |
| YP_009177283.1 | NC_028247_p36 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 24420 | 27119 |
| YP_009177291.1 | NC_028247_p44 | hypothetical protein | phrog_4427 | unknown function | unknown function | 1 | 28925 | 29131 |
| YP_009177265.1 | NC_028247_p18 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 11490 | 11732 |
| YP_009177295.1 | NC_028247_p48 | hypothetical protein | phrog_4332 | unknown function | unknown function | 1 | 30565 | 30945 |
| YP_009177312.1 | NC_028247_p65 | hypothetical protein | phrog_11 | baseplate spike | tail | -1 | 41875 | 42516 |
| YP_009177346.1 | NC_028247_p99 | hypothetical protein | phrog_4385 | unknown function | unknown function | 1 | 69661 | 69954 |
| YP_009177369.1 | NC_028247_p122 | hypothetical protein | phrog_4327 | unknown function | unknown function | -1 | 80064 | 80471 |
| YP_009177328.1 | NC_028247_p81 | hypothetical protein | phrog_240 | head protein | head and packaging | -1 | 54206 | 54538 |
| YP_009177333.1 | NC_028247_p86 | hypothetical protein | phrog_2114 | unknown function | unknown function | -1 | 58740 | 59474 |
| YP_009177310.1 | NC_028247_p63 | basplate assembly protein | phrog_6 | baseplate wedge subunit | tail | -1 | 39990 | 41459 |
| YP_009177363.1 | NC_028247_p116 | hypothetical protein | phrog_4318 | unknown function | unknown function | -1 | 77761 | 78102 |
| YP_009177290.1 | NC_028247_p43 | hypothetical protein | phrog_902 | unknown function | unknown function | 1 | 28678 | 28914 |
| YP_009177344.1 | NC_028247_p97 | hypothetical protein | phrog_4266 | unknown function | unknown function | 1 | 68885 | 69283 |
| YP_009177381.1 | NC_028247_p134 | hypothetical protein | phrog_6082 | unknown function | unknown function | -1 | 85169 | 85405 |
| YP_009177324.1 | NC_028247_p77 | hypothetical protein | phrog_1732 | unknown function | unknown function | -1 | 50848 | 51297 |
| YP_009177262.1 | NC_028247_p15 | hypothetical protein | phrog_24391 | unknown function | unknown function | -1 | 8859 | 9041 |
| YP_009177286.1 | NC_028247_p39 | hypothetical protein | phrog_5180 | unknown function | unknown function | 1 | 27899 | 28108 |
| YP_009177358.1 | NC_028247_p111 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75015 | 75215 |
| YP_009177375.1 | NC_028247_p128 | hypothetical protein | phrog_5089 | unknown function | unknown function | -1 | 82653 | 82910 |
| YP_009177351.1 | NC_028247_p104 | hypothetical protein | phrog_4343 | unknown function | unknown function | 1 | 71882 | 72388 |
| YP_009177360.1 | NC_028247_p113 | hypothetical protein | phrog_7022 | unknown function | unknown function | -1 | 76506 | 76769 |
| YP_009177383.1 | NC_028247_p136 | hypothetical protein | phrog_25740 | unknown function | unknown function | -1 | 85716 | 86168 |
| YP_009177281.1 | NC_028247_p34 | hypothetical protein | phrog_4251 | minor tail protein | tail | -1 | 22942 | 23736 |
| YP_009177270.1 | NC_028247_p23 | hypothetical protein | phrog_4007 | unknown function | unknown function | -1 | 15747 | 16073 |
| YP_009177327.1 | NC_028247_p80 | head maturation protease | phrog_53 | head maturation protease | head and packaging | -1 | 52845 | 54194 |
| YP_009177293.1 | NC_028247_p46 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 29223 | 30323 |
| YP_009177345.1 | NC_028247_p98 | hypothetical protein | phrog_4348 | unknown function | unknown function | 1 | 69276 | 69659 |
| YP_009177370.1 | NC_028247_p123 | hypothetical protein | phrog_3436 | unknown function | unknown function | -1 | 80561 | 80833 |
| YP_009177311.1 | NC_028247_p64 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | -1 | 41459 | 41875 |
| YP_009177334.1 | NC_028247_p87 | hypothetical protein | phrog_10765 | unknown function | unknown function | -1 | 59956 | 60168 |
| YP_009177314.1 | NC_028247_p67 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | -1 | 43490 | 43831 |
| YP_009177380.1 | NC_028247_p133 | hypothetical protein | phrog_2210 | unknown function | unknown function | -1 | 84976 | 85176 |
| YP_009177318.1 | NC_028247_p71 | tape-measure chaperone | phrog_1613 | tail assembly chaperone | tail | -1 | 47101 | 47502 |
| YP_009177250.1 | NC_028247_p3 | hypothetical protein | phrog_4262 | unknown function | unknown function | -1 | 2597 | 2932 |
| YP_009177296.1 | NC_028247_p49 | hypothetical protein | phrog_4473 | unknown function | unknown function | 1 | 30948 | 31151 |
| YP_009177287.1 | NC_028247_p40 | hypothetical protein | phrog_3474 | unknown function | unknown function | 1 | 28105 | 28308 |
| YP_009177317.1 | NC_028247_p70 | tape-measure chaperone | phrog_3840 | tail assembly chaperone | tail | -1 | 46865 | 47502 |
| YP_009177371.1 | NC_028247_p124 | hypothetical protein | phrog_4375 | unknown function | unknown function | -1 | 80898 | 81245 |
| YP_009177342.1 | NC_028247_p95 | tail protein | phrog_3995 | tail protein | tail | 1 | 67473 | 68369 |
| YP_009177272.1 | NC_028247_p25 | hypothetical protein | phrog_4442 | unknown function | unknown function | -1 | 16809 | 17024 |
| YP_009177364.1 | NC_028247_p117 | hypothetical protein | phrog_10118 | unknown function | unknown function | -1 | 78199 | 78420 |
| YP_009177260.1 | NC_028247_p13 | hypothetical protein | phrog_4382 | unknown function | unknown function | -1 | 8116 | 8508 |
| YP_009177277.1 | NC_028247_p30 | hypothetical protein | phrog_4982 | unknown function | unknown function | -1 | 19704 | 19982 |
| YP_009177309.1 | NC_028247_p62 | hypothetical protein | phrog_4017 | baseplate protein | tail | -1 | 39130 | 39987 |
| YP_009177385.1 | NC_028247_p138 | o-spanin | phrog_4180 | unknown function | unknown function | -1 | 86438 | 86707 |
| YP_009177343.1 | NC_028247_p96 | lysozyme | phrog_7 | endolysin | lysis | 1 | 68369 | 68833 |
| YP_009177276.1 | NC_028247_p29 | hypothetical protein | phrog_4424 | unknown function | unknown function | -1 | 19570 | 19707 |
| YP_009177271.1 | NC_028247_p24 | hypothetical protein | phrog_2144 | MazG-like pyrophosphatase | other | -1 | 16054 | 16809 |
| YP_009177329.1 | NC_028247_p82 | hypothetical protein | phrog_3977 | unknown function | unknown function | -1 | 54538 | 55038 |
| YP_009177368.1 | NC_028247_p121 | hypothetical protein | phrog_9030 | unknown function | unknown function | -1 | 79730 | 79978 |
| YP_009177376.1 | NC_028247_p129 | hypothetical protein | phrog_4495 | unknown function | unknown function | -1 | 83002 | 83382 |
| YP_009177355.1 | NC_028247_p108 | hypothetical protein | phrog_9967 | unknown function | unknown function | 1 | 73159 | 73452 |
| YP_009177300.1 | NC_028247_p53 | hypothetical protein | phrog_4422 | unknown function | unknown function | 1 | 32294 | 32809 |
| YP_009177273.1 | NC_028247_p26 | HNH homing endonuclease | phrog_447 | NAD synthetase | other | -1 | 17026 | 17526 |
| YP_009177289.1 | NC_028247_p42 | hypothetical protein | phrog_9065 | unknown function | unknown function | 1 | 28416 | 28667 |
| YP_009177305.1 | NC_028247_p58 | hypothetical protein | phrog_402 | unknown function | unknown function | -1 | 34933 | 35127 |
| YP_009177389.1 | NC_028247_p142 | hypothetical protein | phrog_600 | unknown function | unknown function | -1 | 88150 | 88698 |
| YP_009177359.1 | NC_028247_p112 | hypothetical protein | phrog_4559 | unknown function | unknown function | -1 | 76192 | 76443 |
| YP_009177254.1 | NC_028247_p7 | hypothetical protein | phrog_4726 | unknown function | unknown function | -1 | 5955 | 6233 |
| YP_009177332.1 | NC_028247_p85 | hypothetical protein | phrog_4397 | unknown function | unknown function | -1 | 58140 | 58346 |
| YP_009177257.1 | NC_028247_p10 | hypothetical protein | phrog_4425 | unknown function | unknown function | -1 | 7117 | 7374 |
| YP_009177261.1 | NC_028247_p14 | hypothetical protein | phrog_8826 | unknown function | unknown function | -1 | 8599 | 8862 |
| YP_009177384.1 | NC_028247_p137 | hypothetical protein | phrog_4391 | unknown function | unknown function | -1 | 86172 | 86441 |
| YP_009177337.1 | NC_028247_p90 | hypothetical protein | phrog_4114 | unknown function | unknown function | -1 | 65482 | 65853 |
| YP_009177255.1 | NC_028247_p8 | hypothetical protein | phrog_3500 | unknown function | unknown function | -1 | 6226 | 6741 |
| YP_009177326.1 | NC_028247_p79 | hypothetical protein | phrog_4146 | tail protease | other | -1 | 52455 | 52832 |
| YP_009177349.1 | NC_028247_p102 | hypothetical protein | phrog_5380 | unknown function | unknown function | 1 | 70954 | 71670 |
| YP_009177321.1 | NC_028247_p74 | hypothetical protein | phrog_4082 | unknown function | unknown function | -1 | 49394 | 49993 |
| YP_009177258.1 | NC_028247_p11 | hypothetical protein | phrog_5082 | unknown function | unknown function | -1 | 7390 | 7668 |
| YP_009177313.1 | NC_028247_p66 | hypothetical protein | phrog_196 | baseplate hub | tail | -1 | 42513 | 43490 |
| YP_009177366.1 | NC_028247_p119 | hypothetical protein | phrog_4640 | unknown function | unknown function | -1 | 78796 | 79026 |
| YP_009177322.1 | NC_028247_p75 | hypothetical protein | phrog_2874 | unknown function | unknown function | -1 | 49968 | 50369 |
| YP_009177299.1 | NC_028247_p52 | hypothetical protein | phrog_9143 | unknown function | unknown function | 1 | 31789 | 32292 |
| YP_009177306.1 | NC_028247_p59 | tail fiber protein | phrog_4277 | tail fiber protein | tail | -1 | 35214 | 37574 |
| YP_009177259.1 | NC_028247_p12 | anaerobic NTP reductase small subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | -1 | 7631 | 8116 |
| YP_009177308.1 | NC_028247_p61 | hypothetical protein | phrog_4141 | unknown function | unknown function | -1 | 38831 | 39130 |
| YP_009177288.1 | NC_028247_p41 | hypothetical protein | phrog_2381 | unknown function | unknown function | 1 | 28283 | 28426 |
| YP_009177382.1 | NC_028247_p135 | hypothetical protein | phrog_4453 | unknown function | unknown function | -1 | 85380 | 85706 |
| YP_009177253.1 | NC_028247_p6 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | -1 | 5063 | 5944 |
| YP_009177279.1 | NC_028247_p32 | hypothetical protein | phrog_4469 | unknown function | unknown function | -1 | 21941 | 22135 |
| YP_009177378.1 | NC_028247_p131 | hypothetical protein | phrog_15689 | unknown function | unknown function | 1 | 83898 | 84086 |
| YP_009177319.1 | NC_028247_p72 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | -1 | 47579 | 48025 |
| YP_009177335.1 | NC_028247_p88 | HNH endonuclease | phrog_10822 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 60841 | 61293 |
| YP_009177301.1 | NC_028247_p54 | hypothetical protein | phrog_2993 | unknown function | unknown function | 1 | 32806 | 33078 |
| YP_009177248.1 | NC_028247_p1 | rIIA protein | phrog_612 | RIIA lysis inhibitor | lysis | -1 | 1 | 2373 |
| YP_009177340.1 | NC_028247_p93 | hypothetical protein | phrog_4034 | unknown function | unknown function | 1 | 66473 | 67063 |
| YP_009177347.1 | NC_028247_p100 | hypothetical protein | phrog_4040 | unknown function | unknown function | 1 | 69947 | 70291 |
| YP_009177304.1 | NC_028247_p57 | holin | phrog_4038 | unknown function | unknown function | -1 | 34559 | 34933 |
| YP_009177302.1 | NC_028247_p55 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 33075 | 33620 |
| YP_009177354.1 | NC_028247_p107 | hypothetical protein | phrog_7193 | unknown function | unknown function | 1 | 72713 | 73156 |
| YP_009177267.1 | NC_028247_p20 | hypothetical protein | phrog_2652 | unknown function | unknown function | -1 | 12802 | 13077 |
| YP_009177294.1 | NC_028247_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30332 | 30481 |
| YP_009177268.1 | NC_028247_p21 | ribonucleoside triphosphate reductase large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | -1 | 13133 | 15367 |
| YP_009177285.1 | NC_028247_p38 | hypothetical protein | phrog_4230 | unknown function | unknown function | 1 | 27684 | 27902 |
| YP_009177387.1 | NC_028247_p140 | hypothetical protein | phrog_2267 | unknown function | unknown function | -1 | 87001 | 87465 |
| YP_009177263.1 | NC_028247_p16 | anaerobic nucleoside reductase | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | -1 | 9106 | 11247 |
| YP_009177275.1 | NC_028247_p28 | hypothetical protein | phrog_3877 | unknown function | unknown function | -1 | 18620 | 19483 |
| YP_009177284.1 | NC_028247_p37 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27119 | 27631 |
| YP_009177298.1 | NC_028247_p51 | hypothetical protein | phrog_4116 | unknown function | unknown function | 1 | 31445 | 31804 |
| YP_009177361.1 | NC_028247_p114 | hypothetical protein | phrog_4725 | unknown function | unknown function | -1 | 76830 | 77357 |
| YP_009177274.1 | NC_028247_p27 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 17516 | 18556 |
| YP_009177348.1 | NC_028247_p101 | hypothetical protein | phrog_4109 | unknown function | unknown function | 1 | 70293 | 70883 |
| YP_009177336.1 | NC_028247_p89 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | -1 | 63990 | 65405 |
| YP_009177278.1 | NC_028247_p31 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 19957 | 21948 |
| YP_009177249.1 | NC_028247_p2 | hypothetical protein | phrog_3931 | unknown function | unknown function | -1 | 2436 | 2615 |