Genomic map of Escherichia phage PA2 (NC_028449)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028449
Definition
Escherichia phage PA2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Oslovirus.
DB of origin
REFSEQ
Length
63569
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
50.16
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009180925.1 NC_028449_p43 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 25043 25492
YP_009180900.1 NC_028449_p18 hypothetical protein phrog_1832 released from the phage upon host infection other -1 8412 8630
YP_009180956.1 NC_028449_p74 tail fiber protein phrog_496 tail fiber protein tail 1 48395 49663
YP_009180935.1 NC_028449_p53 hypothetical protein phrog_8301 unknown function unknown function 1 31309 31728
YP_009180922.1 NC_028449_p40 hypothetical protein phrog_1347 unknown function unknown function 1 22191 22568
YP_009180953.1 NC_028449_p71 hypothetical protein phrog_2014 unknown function unknown function 1 46290 46478
YP_009180913.1 NC_028449_p31 hypothetical protein phrog_1050 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 15747 16028
YP_009180951.1 NC_028449_p69 tail fiber protein phrog_366 tail fiber protein tail 1 43942 45879
YP_009180924.1 NC_028449_p42 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 24072 25043
YP_009180902.1 NC_028449_p20 hypothetical protein phrog_6847 unknown function unknown function -1 8807 9313
YP_009180918.1 NC_028449_p36 modification methylase PstI phrog_1600 DNA methyltransferase other -1 19083 20552
YP_009180939.1 NC_028449_p57 outer membrane lytic protein Rz phrog_13 Rz-like spanin lysis 1 33554 34018
YP_009180949.1 NC_028449_p67 hypothetical protein phrog_437 virion structural protein head and packaging 1 42732 43295
YP_009180907.1 NC_028449_p25 hypothetical protein phrog_1363 unknown function unknown function -1 11677 12120
YP_009180955.1 NC_028449_p73 hypothetical protein phrog_511 internal virion protein head and packaging 1 46698 48398
YP_009180954.1 NC_028449_p72 hypothetical protein phrog_11089 unknown function unknown function 1 46545 46658
YP_009180921.1 NC_028449_p39 hypothetical protein phrog_852 unknown function unknown function 1 21690 21983
YP_009180905.1 NC_028449_p23 hypothetical protein phrog_1226 unknown function unknown function -1 10491 10694
YP_009180950.1 NC_028449_p68 hypothetical protein phrog_399 structural protein head and packaging 1 43295 43945
YP_009180966.1 NC_028449_p84 hypothetical protein phrog_616 unknown function unknown function 1 55041 63422
YP_009180960.1 NC_028449_p78 hypothetical protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover 1 51637 51777
YP_009180903.1 NC_028449_p21 hypothetical protein phrog_250 unknown function unknown function -1 9315 10262
YP_009180909.1 NC_028449_p27 hypothetical protein phrog_204 unknown function unknown function -1 13082 13429
YP_009180946.1 NC_028449_p64 hypothetical protein phrog_334 major head protein head and packaging 1 40578 41792
YP_009180941.1 NC_028449_p59 hypothetical protein phrog_6954 Rz-like spanin lysis 1 34493 34696
YP_009180930.1 NC_028449_p48 shiga-like toxin II subunit A precursor phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 27465 28424
YP_009180933.1 NC_028449_p51 hypothetical protein phrog_9558 unknown function unknown function 1 31125 31250
YP_009180908.1 NC_028449_p26 hypothetical protein phrog_210 unknown function unknown function -1 12197 13018
YP_009180894.1 NC_028449_p12 hypothetical protein phrog_9924 unknown function unknown function 1 6030 6227
YP_009180898.1 NC_028449_p16 EaA protein phrog_60 unknown function unknown function -1 7496 8119
YP_009180912.1 NC_028449_p30 recombinational DNA repair protein RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 14778 15728
YP_009180948.1 NC_028449_p66 hypothetical protein phrog_482 unknown function unknown function 1 42287 42748
YP_009180904.1 NC_028449_p22 hypothetical protein phrog_1344 unknown function unknown function -1 10259 10498
YP_009180916.1 NC_028449_p34 hypothetical protein phrog_995 transcriptional regulator transcription regulation -1 16625 17272
YP_009180915.1 NC_028449_p33 Kil protein phrog_294 Kil protein for bacterial septation inhibition other -1 16342 16554
YP_009180914.1 NC_028449_p32 hypothetical protein phrog_1635 unknown function unknown function -1 16049 16330
YP_009180920.1 NC_028449_p38 regulatory protein Cro phrog_35 transcriptional repressor transcription regulation 1 21456 21659
YP_009180893.1 NC_028449_p11 hypothetical protein phrog_6494 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 5644 5901
YP_009180963.1 NC_028449_p81 hypothetical protein phrog_596 unknown function unknown function 1 52988 53434
YP_009180928.1 NC_028449_p46 antitermination protein Q phrog_79 anti-termination protein Q-like transcription regulation 1 26247 26681
YP_009180883.1 NC_028449_p1 mobile element protein phrog_1 integrase integration and excision 1 220 1389
YP_009180936.1 NC_028449_p54 holin phrog_20 holin lysis 1 31806 32021
YP_009180926.1 NC_028449_p44 protein NinG phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 25497 26063
YP_009180964.1 NC_028449_p82 hypothetical protein phrog_594 unknown function unknown function 1 53444 53695
YP_009180958.1 NC_028449_p76 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 49962 50579
YP_009180923.1 NC_028449_p41 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 22562 24082
YP_009180917.1 NC_028449_p35 type II restriction enzyme BsuBI phrog_1639 restriction endonuclease DNA, RNA and nucleotide metabolism -1 18133 19086
YP_009180890.1 NC_028449_p8 adenine DNA methyltransferase phrog_15877 DNA methyltransferase other -1 3763 4158
YP_009180887.1 NC_028449_p5 adenine DNA methyltransferase singleton unknown function unknown function -1 2219 2416
YP_009180896.1 NC_028449_p14 antirepressor protein phrog_1726 anti-repressor transcription regulation -1 6664 7233
YP_009180889.1 NC_028449_p7 mobile element protein phrog_151 transposase integration and excision -1 3385 3660
YP_009180962.1 NC_028449_p80 hypothetical protein phrog_611 unknown function unknown function 1 52329 52985
YP_009180899.1 NC_028449_p17 hypothetical protein phrog_2821 unknown function unknown function -1 8123 8410
YP_009180901.1 NC_028449_p19 hypothetical protein phrog_926 unknown function unknown function -1 8632 8847
YP_009180886.1 NC_028449_p4 hypothetical protein phrog_292 unknown function unknown function -1 2047 2259
YP_009180892.1 NC_028449_p10 hypothetical protein phrog_1760 anti-repressor transcription regulation -1 4642 5319
YP_009180937.1 NC_028449_p55 lysin phrog_7 endolysin lysis 1 32026 32559
YP_009180927.1 NC_028449_p45 NinH-like protein phrog_268 unknown function unknown function 1 26060 26254
YP_009180888.1 NC_028449_p6 mobile element protein phrog_157 transposase integration and excision -1 2498 3385
YP_009180957.1 NC_028449_p75 outer membrane protein phrog_557 outer membrane protein other 1 49678 49956
YP_009180891.1 NC_028449_p9 hypothetical protein phrog_1680 unknown function unknown function -1 4155 4586
YP_009180965.1 NC_028449_p83 hypothetical protein phrog_601 unknown function unknown function 1 53706 54971
YP_009180929.1 NC_028449_p47 DNA methylase phrog_14488 DNA methyltransferase other 1 26930 27082
YP_009180938.1 NC_028449_p56 antirepressor protein phrog_524 anti-repressor Ant transcription regulation 1 32834 33397
YP_009180932.1 NC_028449_p50 mobile element protein phrog_143 unknown function unknown function 1 29191 31128
YP_009180934.1 NC_028449_p52 hypothetical protein phrog_26471 unknown function unknown function 1 31238 31351
YP_009180910.1 NC_028449_p28 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 13505 14092
YP_009180959.1 NC_028449_p77 attachment invasion locus protein precursor phrog_108 Lom outer membrane protein other 1 50670 51404
YP_009180952.1 NC_028449_p70 tail fiber protein phrog_576 tail fiber protein tail 1 45881 46150
YP_009180945.1 NC_028449_p63 hypothetical protein phrog_479 unknown function unknown function 1 39547 40554
YP_009180942.1 NC_028449_p60 DNA packaging protein phrog_370 terminase small subunit head and packaging 1 34752 35558
YP_009180944.1 NC_028449_p62 hypothetical protein phrog_156 portal protein head and packaging 1 37245 39389
YP_009180897.1 NC_028449_p15 hypothetical protein phrog_12199 unknown function unknown function -1 7226 7402
YP_009180884.1 NC_028449_p2 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 1373 1540
YP_009180961.1 NC_028449_p79 hypothetical protein phrog_610 unknown function unknown function 1 51834 52235
YP_009180895.1 NC_028449_p13 HigA protein phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 1 6316 6621
YP_009180947.1 NC_028449_p65 hypothetical protein phrog_486 virion structural protein head and packaging 1 41848 42237
YP_009180885.1 NC_028449_p3 hypothetical protein phrog_1888 unknown function unknown function -1 1634 2011
YP_009180919.1 NC_028449_p37 repressor protein CI phrog_4 transcriptional repressor transcription regulation -1 20647 21360
YP_009180940.1 NC_028449_p58 lipoprotein Bor phrog_260 Bor-like outer membrane protein other -1 34050 34343
YP_009180931.1 NC_028449_p49 shiga-like toxin II subunit B precursor phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 28436 28705
YP_009180911.1 NC_028449_p29 enzyme phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 14092 14781
YP_009180943.1 NC_028449_p61 hypothetical protein phrog_2 terminase large subunit head and packaging 1 35539 37245
YP_009180906.1 NC_028449_p24 NinC phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 10691 11506