| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028651 |
Definition |
Hydrogenobaculum phage 1 strain HP1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; unclassified viruses; unclassified DNA viruses; unclassified dsDNA phages. |
DB of origin |
REFSEQ |
Length |
19351 |
Host Name |
Hydrogenobaculum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
26 |
%GC |
38.18 |
Number of singletons |
23 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009186879.1 | NC_028651_p15 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 15036 | 15206 |
| YP_009186885.1 | NC_028651_p21 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 17593 | 17730 |
| YP_009186866.1 | NC_028651_p2 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 735 | 2237 |
| YP_009186867.1 | NC_028651_p3 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 2255 | 6145 |
| YP_009186890.1 | NC_028651_p26 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 19100 | 19228 |
| YP_009186868.1 | NC_028651_p4 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 6145 | 6627 |
| YP_009186880.1 | NC_028651_p16 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 15454 | 16224 |
| YP_009186871.1 | NC_028651_p7 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 7150 | 8901 |
| YP_009186869.1 | NC_028651_p5 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 6640 | 6891 |
| YP_009186876.1 | NC_028651_p12 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 11063 | 11698 |
| YP_009186877.1 | NC_028651_p13 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 11771 | 14494 |
| YP_009186875.1 | NC_028651_p11 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 10783 | 11070 |
| YP_009186873.1 | NC_028651_p9 | protein of an unannotated phage | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | -1 | 9545 | 10537 |
| YP_009186884.1 | NC_028651_p20 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 17307 | 17492 |
| YP_009186865.1 | NC_028651_p1 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 64 | 732 |
| YP_009186872.1 | NC_028651_p8 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 8898 | 9542 |
| YP_009186878.1 | NC_028651_p14 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 14510 | 14734 |
| YP_009186870.1 | NC_028651_p6 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 6884 | 7156 |
| YP_009186889.1 | NC_028651_p25 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 18792 | 19001 |
| YP_009186881.1 | NC_028651_p17 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 16240 | 16461 |
| YP_009186886.1 | NC_028651_p22 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 17751 | 17954 |
| YP_009186883.1 | NC_028651_p19 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 16829 | 17347 |
| YP_009186887.1 | NC_028651_p23 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 18041 | 18538 |
| YP_009186888.1 | NC_028651_p24 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 18541 | 18795 |
| YP_009186882.1 | NC_028651_p18 | protein of an unannotated phage | phrog_5063 | unknown function | unknown function | -1 | 16476 | 16808 |
| YP_009186874.1 | NC_028651_p10 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 10559 | 10795 |