Genomic map of Pseudomonas phage C11 (NC_028652)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028652
Definition
Pseudomonas phage C11, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus; unclassified Pakpunavirus.
DB of origin
REFSEQ
Length
94109
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
172
%GC
49.39
Number of singletons
1
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009187011.1 NC_028652_p121 hypothetical protein phrog_7063 3'-phosphatase, 5'-polynucleotide kinase other 1 70431 71381
YP_009186963.1 NC_028652_p73 tail fiber protein phrog_2282 tail fiber protein tail 1 44316 46373
YP_009187009.1 NC_028652_p119 hypothetical protein phrog_6971 unknown function unknown function 1 69887 70222
YP_009186971.1 NC_028652_p81 hypothetical protein phrog_3899 unknown function unknown function 1 50054 50368
YP_009187005.1 NC_028652_p115 hypothetical protein phrog_4305 unknown function unknown function 1 68510 68692
YP_009186938.1 NC_028652_p48 hypothetical protein singleton unknown function unknown function 1 23247 23411
YP_009186962.1 NC_028652_p72 hypothetical protein phrog_587 structural protein head and packaging 1 43574 44305
YP_009187016.1 NC_028652_p126 ribonucleoside-diphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 73938 75683
YP_009186941.1 NC_028652_p51 hypothetical protein phrog_1530 DNA methyltransferase other 1 28207 28677
YP_009186892.1 NC_028652_p2 hypothetical protein phrog_8631 unknown function unknown function 1 1455 1604
YP_009186952.1 NC_028652_p62 hypothetical protein phrog_280 virion structural protein head and packaging 1 35453 35932
YP_009187013.1 NC_028652_p123 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 71588 72535
YP_009186906.1 NC_028652_p16 hypothetical protein phrog_8023 unknown function unknown function -1 6869 7186
YP_009186966.1 NC_028652_p76 endolysin phrog_2860 endolysin head and packaging 1 48319 48879
YP_009187031.1 NC_028652_p141 hypothetical protein phrog_5201 unknown function unknown function 1 81310 81579
YP_009186986.1 NC_028652_p96 hypothetical protein phrog_7141 unknown function unknown function 1 56618 57040
YP_009187059.1 NC_028652_p169 hypothetical protein phrog_4310 unknown function unknown function 1 91590 91784
YP_009187008.1 NC_028652_p118 hypothetical protein phrog_6873 unknown function unknown function 1 69659 69868
YP_009186970.1 NC_028652_p80 hypothetical protein phrog_4172 unknown function unknown function 1 49713 50018
YP_009186934.1 NC_028652_p44 hypothetical protein phrog_1827 ATP-dependent protease other -1 19725 20273
YP_009186928.1 NC_028652_p38 hypothetical protein phrog_3948 unknown function unknown function -1 18135 18485
YP_009187010.1 NC_028652_p120 hypothetical protein phrog_7016 unknown function unknown function 1 70226 70438
YP_009186922.1 NC_028652_p32 hypothetical protein phrog_2686 unknown function unknown function -1 15310 15774
YP_009187026.1 NC_028652_p136 hypothetical protein phrog_5041 unknown function unknown function 1 78078 78317
YP_009186931.1 NC_028652_p41 hypothetical protein phrog_7505 unknown function unknown function -1 19054 19239
YP_009187046.1 NC_028652_p156 hypothetical protein phrog_4025 unknown function unknown function 1 86062 86328
YP_009186902.1 NC_028652_p12 hypothetical protein phrog_6967 unknown function unknown function -1 5061 5402
YP_009186944.1 NC_028652_p54 major capsid protein phrog_29 major head protein head and packaging 1 30073 31107
YP_009187015.1 NC_028652_p125 ribonucleoside-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 72899 73945
YP_009186998.1 NC_028652_p108 hypothetical protein phrog_6983 unknown function unknown function 1 65407 65628
YP_009186904.1 NC_028652_p14 hypothetical protein phrog_6932 unknown function unknown function -1 5894 6271
YP_009186896.1 NC_028652_p6 hypothetical protein phrog_15763 unknown function unknown function -1 2741 3145
YP_009187040.1 NC_028652_p150 hypothetical protein phrog_2554 unknown function unknown function 1 83671 84342
YP_009186937.1 NC_028652_p47 hypothetical protein phrog_3900 unknown function unknown function 1 21991 22314
YP_009186891.1 NC_028652_p1 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 330 932
YP_009187039.1 NC_028652_p149 hypothetical protein phrog_7133 unknown function unknown function 1 83212 83595
YP_009187030.1 NC_028652_p140 hypothetical protein phrog_3768 unknown function unknown function 1 80759 81235
YP_009186916.1 NC_028652_p26 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 12630 12905
YP_009187062.1 NC_028652_p172 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 93266 93868
YP_009187038.1 NC_028652_p148 hypothetical protein phrog_14281 unknown function unknown function 1 83070 83219
YP_009187061.1 NC_028652_p171 hypothetical protein phrog_4955 unknown function unknown function 1 92216 92476
YP_009186910.1 NC_028652_p20 nicotinamide phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other -1 8034 9722
YP_009186995.1 NC_028652_p105 hypothetical protein phrog_6824 unknown function unknown function 1 63272 63988
YP_009186948.1 NC_028652_p58 hypothetical protein phrog_4087 unknown function unknown function 1 32461 33024
YP_009187044.1 NC_028652_p154 hypothetical protein phrog_4261 unknown function unknown function 1 85512 85808
YP_009186956.1 NC_028652_p66 hypothetical protein phrog_817 tail fiber protein tail 1 38937 39698
YP_009186895.1 NC_028652_p5 hypothetical protein phrog_6773 unknown function unknown function -1 2328 2744
YP_009187004.1 NC_028652_p114 hypothetical protein phrog_4305 unknown function unknown function 1 68341 68508
YP_009187037.1 NC_028652_p147 hypothetical protein phrog_4323 unknown function unknown function 1 82829 82975
YP_009186924.1 NC_028652_p34 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 16992 17408
YP_009187056.1 NC_028652_p166 hypothetical protein phrog_7753 unknown function unknown function 1 90350 90811
YP_009186913.1 NC_028652_p23 ATPase phrog_2071 ATPase other -1 10870 11286
YP_009186939.1 NC_028652_p49 terminase large subunit phrog_979 terminase large subunit head and packaging 1 25225 26745
YP_009186960.1 NC_028652_p70 hypothetical protein phrog_120 baseplate wedge subunit tail 1 41719 42090
YP_009186920.1 NC_028652_p30 phosphohydrolase phrog_990 metal-dependent phosphohydrolase other -1 14130 14690
YP_009186985.1 NC_028652_p95 hypothetical protein phrog_4991 unknown function unknown function 1 56315 56617
YP_009186899.1 NC_028652_p9 hypothetical protein phrog_7430 unknown function unknown function -1 4119 4430
YP_009187012.1 NC_028652_p122 hypothetical protein phrog_9669 unknown function unknown function 1 71441 71533
YP_009187036.1 NC_028652_p146 hypothetical protein phrog_2267 unknown function unknown function 1 82446 82754
YP_009187055.1 NC_028652_p165 hypothetical protein phrog_38628 unknown function unknown function 1 90142 90285
YP_009187001.1 NC_028652_p111 hypothetical protein phrog_5822 unknown function unknown function 1 67279 67677
YP_009186989.1 NC_028652_p99 hypothetical protein phrog_6115 unknown function unknown function 1 57474 57719
YP_009186940.1 NC_028652_p50 hypothetical protein phrog_113 portal protein head and packaging 1 26758 28197
YP_009187052.1 NC_028652_p162 hypothetical protein phrog_1106 unknown function unknown function 1 88496 88975
YP_009187058.1 NC_028652_p168 hypothetical protein phrog_11201 unknown function unknown function 1 91224 91490
YP_009187048.1 NC_028652_p158 hypothetical protein phrog_21627 unknown function unknown function 1 86822 87076
YP_009187035.1 NC_028652_p145 hypothetical protein phrog_6265 unknown function unknown function 1 82318 82446
YP_009187034.1 NC_028652_p144 hypothetical protein phrog_5289 unknown function unknown function 1 82014 82247
YP_009186930.1 NC_028652_p40 hypothetical protein phrog_7048 unknown function unknown function -1 18741 19019
YP_009187002.1 NC_028652_p112 hypothetical protein phrog_7621 unknown function unknown function 1 67662 67910
YP_009186929.1 NC_028652_p39 hypothetical protein phrog_6991 unknown function unknown function -1 18466 18744
YP_009187060.1 NC_028652_p170 hypothetical protein phrog_9686 unknown function unknown function 1 92000 92161
YP_009187021.1 NC_028652_p131 hypothetical protein phrog_9028 unknown function unknown function 1 76597 76911
YP_009186927.1 NC_028652_p37 hypothetical protein phrog_5276 unknown function unknown function -1 17857 18126
YP_009187047.1 NC_028652_p157 hypothetical protein phrog_6935 unknown function unknown function 1 86325 86717
YP_009186907.1 NC_028652_p17 hypothetical protein phrog_6391 unknown function unknown function -1 7188 7337
YP_009187028.1 NC_028652_p138 hypothetical protein phrog_6266 unknown function unknown function 1 78748 79734
YP_009186975.1 NC_028652_p85 hypothetical protein phrog_7461 unknown function unknown function -1 51859 52017
YP_009187020.1 NC_028652_p130 hypothetical protein phrog_7088 unknown function unknown function 1 76361 76597
YP_009186943.1 NC_028652_p53 hypothetical protein phrog_49 head decoration head and packaging 1 29619 30029
YP_009186925.1 NC_028652_p35 hypothetical protein phrog_7094 unknown function unknown function -1 17411 17638
YP_009186917.1 NC_028652_p27 hypothetical protein phrog_5447 unknown function unknown function -1 12907 13143
YP_009187019.1 NC_028652_p129 hypothetical protein phrog_6898 unknown function unknown function 1 76128 76361
YP_009187033.1 NC_028652_p143 hypothetical protein phrog_6871 unknown function unknown function 1 81734 82024
YP_009186997.1 NC_028652_p107 hypothetical protein phrog_7883 unknown function unknown function 1 65164 65397
YP_009187024.1 NC_028652_p134 hypothetical protein phrog_6974 unknown function unknown function 1 77387 77872
YP_009186912.1 NC_028652_p22 phosphoribosylpyrophosphate synthetase phrog_619 ribose-phosphate pyrophosphokinase other -1 9994 10860
YP_009186990.1 NC_028652_p100 hypothetical protein phrog_7863 unknown function unknown function 1 57716 57901
YP_009186919.1 NC_028652_p29 hypothetical protein phrog_6781 unknown function unknown function -1 13709 14140
YP_009186987.1 NC_028652_p97 hypothetical protein phrog_6310 unknown function unknown function 1 57158 57286
YP_009187025.1 NC_028652_p135 hypothetical protein phrog_6846 unknown function unknown function 1 77882 78076
YP_009186967.1 NC_028652_p77 hypothetical protein phrog_5847 holin lysis 1 48897 49151
YP_009186921.1 NC_028652_p31 cell wall hydrolase phrog_938 endolysin lysis -1 14692 15252
YP_009186900.1 NC_028652_p10 hypothetical protein phrog_2614 unknown function unknown function -1 4430 4792
YP_009186977.1 NC_028652_p87 hypothetical protein phrog_4794 unknown function unknown function -1 53207 53440
YP_009186994.1 NC_028652_p104 hypothetical protein phrog_7532 unknown function unknown function 1 63103 63270
YP_009187006.1 NC_028652_p116 hypothetical protein phrog_221 metallo-phosphoesterase other 1 68689 69468
YP_009187050.1 NC_028652_p160 hypothetical protein phrog_3303 unknown function unknown function 1 87553 88134
YP_009186973.1 NC_028652_p83 hypothetical protein phrog_7083 unknown function unknown function -1 50735 51055
YP_009187043.1 NC_028652_p153 hypothetical protein phrog_6818 unknown function unknown function 1 85302 85496
YP_009186979.1 NC_028652_p89 hypothetical protein phrog_6163 unknown function unknown function 1 54152 54349
YP_009186976.1 NC_028652_p86 hypothetical protein phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 52030 53175
YP_009187017.1 NC_028652_p127 hypothetical protein phrog_5604 unknown function unknown function 1 75758 75904
YP_009186969.1 NC_028652_p79 hypothetical protein phrog_5388 Rz-like spanin lysis 1 49592 49723
YP_009187003.1 NC_028652_p113 hypothetical protein phrog_7013 unknown function unknown function 1 67907 68344
YP_009186983.1 NC_028652_p93 hypothetical protein phrog_7101 unknown function unknown function 1 55502 56158
YP_009186972.1 NC_028652_p82 hypothetical protein phrog_2827 unknown function unknown function -1 50416 50724
YP_009187007.1 NC_028652_p117 hypothetical protein phrog_7135 unknown function unknown function 1 69465 69647
YP_009186984.1 NC_028652_p94 hypothetical protein phrog_6917 unknown function unknown function 1 56145 56312
YP_009187018.1 NC_028652_p128 hypothetical protein phrog_343 unknown function unknown function 1 75901 76128
YP_009186945.1 NC_028652_p55 hypothetical protein phrog_1732 unknown function unknown function 1 31157 31633
YP_009186926.1 NC_028652_p36 hypothetical protein phrog_2251 unknown function unknown function -1 17648 17860
YP_009186957.1 NC_028652_p67 hypothetical protein phrog_349 virion structural protein head and packaging 1 39702 40058
YP_009186901.1 NC_028652_p11 hypothetical protein phrog_7178 unknown function unknown function -1 4849 5064
YP_009187057.1 NC_028652_p167 hypothetical protein phrog_5746 unknown function unknown function 1 90828 91130
YP_009187032.1 NC_028652_p142 hypothetical protein phrog_6353 unknown function unknown function 1 81591 81734
YP_009186958.1 NC_028652_p68 hypothetical protein phrog_196 baseplate hub tail 1 40055 40972
YP_009186968.1 NC_028652_p78 hypothetical protein phrog_4349 Rz-like spanin lysis 1 49138 49581
YP_009186898.1 NC_028652_p8 hypothetical protein phrog_7742 unknown function unknown function -1 3853 4131
YP_009187041.1 NC_028652_p151 hypothetical protein phrog_5336 unknown function unknown function 1 84347 84685
YP_009186954.1 NC_028652_p64 hypothetical protein phrog_4625 unknown function unknown function 1 36425 36577
YP_009187014.1 NC_028652_p124 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 72538 72882
YP_009186908.1 NC_028652_p18 hypothetical protein phrog_335 phosphatase other -1 7349 7828
YP_009186942.1 NC_028652_p52 hypothetical protein phrog_4103 unknown function unknown function 1 28674 29591
YP_009187027.1 NC_028652_p137 hypothetical protein phrog_6076 unknown function unknown function 1 78380 78580
YP_009186909.1 NC_028652_p19 hypothetical protein phrog_6997 unknown function unknown function -1 7825 8022
YP_009187000.1 NC_028652_p110 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 66719 67282
YP_009186964.1 NC_028652_p74 hypothetical protein phrog_4628 tail fiber assembly tail 1 46417 46791
YP_009187029.1 NC_028652_p139 hypothetical protein phrog_8175 unknown function unknown function 1 79957 80130
YP_009186974.1 NC_028652_p84 hypothetical protein phrog_6945 unknown function unknown function -1 51057 51866
YP_009186950.1 NC_028652_p60 hypothetical protein phrog_280 virion structural protein head and packaging 1 34354 34878
YP_009186982.1 NC_028652_p92 hypothetical protein phrog_4256 unknown function unknown function 1 55116 55505
YP_009187042.1 NC_028652_p152 hypothetical protein phrog_7542 unknown function unknown function 1 84685 85038
YP_009187053.1 NC_028652_p163 hypothetical protein phrog_5680 unknown function unknown function 1 89061 89588
YP_009186903.1 NC_028652_p13 hypothetical protein phrog_3360 unknown function unknown function -1 5404 5907
YP_009186992.1 NC_028652_p102 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 59878 62592
YP_009186953.1 NC_028652_p63 hypothetical protein phrog_1613 tail assembly chaperone tail 1 35946 36317
YP_009186936.1 NC_028652_p46 hypothetical protein phrog_5019 unknown function unknown function -1 20674 21198
YP_009186955.1 NC_028652_p65 tape measure protein phrog_991 tail length tape measure protein tail 1 36574 38940
YP_009187045.1 NC_028652_p155 hypothetical protein phrog_6913 unknown function unknown function 1 85805 86029
YP_009186905.1 NC_028652_p15 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 6291 6872
YP_009186951.1 NC_028652_p61 hypothetical protein phrog_280 virion structural protein head and packaging 1 34953 35453
YP_009186915.1 NC_028652_p25 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 12226 12633
YP_009186893.1 NC_028652_p3 hypothetical protein phrog_7340 unknown function unknown function -1 1668 1934
YP_009186959.1 NC_028652_p69 hypothetical protein phrog_11 baseplate spike tail 1 40969 41709
YP_009186999.1 NC_028652_p109 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 65670 66722
YP_009186933.1 NC_028652_p43 hypothetical protein phrog_6961 unknown function unknown function -1 19479 19664
YP_009186946.1 NC_028652_p56 RNA polymerase phrog_222 tail completion or Neck1 protein connector 1 31671 32084
YP_009186947.1 NC_028652_p57 hypothetical protein phrog_939 head protein head and packaging 1 32084 32464
YP_009187051.1 NC_028652_p161 hypothetical protein phrog_4261 unknown function unknown function 1 88137 88460
YP_009186914.1 NC_028652_p24 RNA ligase/tail attachment protein phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 11297 12214
YP_009187049.1 NC_028652_p159 hypothetical protein phrog_2614 unknown function unknown function 1 87154 87510
YP_009186993.1 NC_028652_p103 hypothetical protein phrog_3878 unknown function unknown function 1 62682 63080
YP_009186932.1 NC_028652_p42 hypothetical protein phrog_343 unknown function unknown function -1 19240 19482
YP_009186988.1 NC_028652_p98 hypothetical protein phrog_7814 unknown function unknown function 1 57273 57464
YP_009186978.1 NC_028652_p88 hypothetical protein phrog_4794 unknown function unknown function -1 53478 53711
YP_009186965.1 NC_028652_p75 tail fiber protein phrog_2282 tail fiber protein tail 1 46803 48302
YP_009186911.1 NC_028652_p21 hypothetical protein phrog_7663 unknown function unknown function -1 9779 9997
YP_009187022.1 NC_028652_p132 hypothetical protein phrog_7233 unknown function unknown function 1 76901 77086
YP_009186991.1 NC_028652_p101 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 57955 59817
YP_009186980.1 NC_028652_p90 hypothetical protein phrog_3754 unknown function unknown function 1 54352 54837
YP_009187023.1 NC_028652_p133 hypothetical protein phrog_6863 unknown function unknown function 1 77127 77375
YP_009186923.1 NC_028652_p33 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 15787 16995
YP_009186949.1 NC_028652_p59 hypothetical protein phrog_205 tail sheath tail 1 33037 34323
YP_009186981.1 NC_028652_p91 hypothetical protein phrog_2834 unknown function unknown function 1 54860 55114
YP_009186961.1 NC_028652_p71 hypothetical protein phrog_6 baseplate wedge subunit tail 1 42092 43555
YP_009186894.1 NC_028652_p4 hypothetical protein phrog_7262 unknown function unknown function -1 1934 2338
YP_009187054.1 NC_028652_p164 hypothetical protein phrog_6605 unknown function unknown function 1 89657 89869
YP_009186897.1 NC_028652_p7 hypothetical protein phrog_7453 unknown function unknown function -1 3188 3850
YP_009186935.1 NC_028652_p45 hypothetical protein phrog_5067 unknown function unknown function -1 20321 20677
YP_009186918.1 NC_028652_p28 phosphoesterase phrog_547 phosphoesterase other -1 13155 13709
YP_009186996.1 NC_028652_p106 hypothetical protein phrog_2544 unknown function unknown function 1 64090 65094