Genomic map of Gordonia phage GTE8 (NC_028653)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028653
Definition
Gordonia phage GTE8, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
67617
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
65.95
Number of singletons
13
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009187135.1 NC_028653_p73 hypothetical protein singleton unknown function unknown function 1 55760 56416
YP_009187123.1 NC_028653_p61 hypothetical protein phrog_14304 transcriptional regulator WhiB-like transcription regulation -1 49612 50187
YP_009187097.1 NC_028653_p35 hypothetical protein phrog_240 head protein head and packaging 1 30569 30913
YP_009187066.1 NC_028653_p4 hypothetical protein phrog_13444 unknown function unknown function 1 1049 1438
YP_009187136.1 NC_028653_p74 hypothetical protein phrog_15206 unknown function unknown function 1 56418 56585
YP_009187121.1 NC_028653_p59 hypothetical protein singleton unknown function unknown function -1 47385 47633
YP_009187100.1 NC_028653_p38 holin phrog_3428 holin lysis 1 32622 32933
YP_009187122.1 NC_028653_p60 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 47633 49561
YP_009187111.1 NC_028653_p49 hypothetical protein phrog_38750 unknown function unknown function -1 42135 42431
YP_009187144.1 NC_028653_p82 hypothetical protein phrog_226 minor tail protein tail 1 60392 60949
YP_009187085.1 NC_028653_p23 hypothetical protein phrog_123 tail terminator connector 1 15134 15649
YP_009187133.1 NC_028653_p71 hypothetical protein singleton unknown function unknown function 1 54601 54894
YP_009187130.1 NC_028653_p68 hypothetical protein singleton unknown function unknown function 1 53037 53228
YP_009187146.1 NC_028653_p84 hypothetical protein phrog_25331 unknown function unknown function 1 61935 63851
YP_009187115.1 NC_028653_p53 hypothetical protein phrog_13965 unknown function unknown function -1 43535 44425
YP_009187093.1 NC_028653_p31 structural protein phrog_4120 minor tail protein tail 1 25738 26865
YP_009187098.1 NC_028653_p36 lysin phrog_6007 endolysin lysis 1 30971 31603
YP_009187089.1 NC_028653_p27 tail assembly protein phrog_8963 tail assembly chaperone tail 1 16862 17176
YP_009187156.1 NC_028653_p94 hypothetical protein phrog_16947 unknown function unknown function 1 67306 67617
YP_009187096.1 NC_028653_p34 hypothetical protein phrog_6030 unknown function unknown function 1 30263 30565
YP_009187128.1 NC_028653_p66 hypothetical protein singleton unknown function unknown function -1 51213 51692
YP_009187099.1 NC_028653_p37 lysin phrog_9506 endolysin lysis 1 31603 32625
YP_009187065.1 NC_028653_p3 hypothetical protein phrog_12539 unknown function unknown function 1 742 1041
YP_009187147.1 NC_028653_p85 hypothetical protein phrog_14019 unknown function unknown function 1 63971 64687
YP_009187094.1 NC_028653_p32 hypothetical protein phrog_346 minor tail protein tail 1 26866 29232
YP_009187073.1 NC_028653_p11 hypothetical protein phrog_18398 unknown function unknown function 1 5527 5994
YP_009187124.1 NC_028653_p62 hypothetical protein phrog_10718 unknown function unknown function -1 50184 50369
YP_009187114.1 NC_028653_p52 hypothetical protein phrog_13496 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42947 43411
YP_009187137.1 NC_028653_p75 hypothetical protein phrog_5644 unknown function unknown function 1 56582 57067
YP_009187140.1 NC_028653_p78 hypothetical protein singleton unknown function unknown function 1 58285 58428
YP_009187070.1 NC_028653_p8 hypothetical protein phrog_6439 unknown function unknown function 1 3094 3345
YP_009187087.1 NC_028653_p25 major tail protein phrog_14117 virion structural protein head and packaging 1 16446 16829
YP_009187154.1 NC_028653_p92 hypothetical protein phrog_24693 unknown function unknown function 1 66639 66941
YP_009187082.1 NC_028653_p20 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13932 14387
YP_009187145.1 NC_028653_p83 hypothetical protein phrog_14603 unknown function unknown function 1 61537 61938
YP_009187090.1 NC_028653_p28 tape measure protein phrog_6090 tail length tape measure protein tail 1 17751 23138
YP_009187106.1 NC_028653_p44 hypothetical protein phrog_13050 unknown function unknown function -1 37102 37374
YP_009187068.1 NC_028653_p6 hypothetical protein phrog_14439 unknown function unknown function 1 1966 2262
YP_009187080.1 NC_028653_p18 structural protein phrog_29 major head protein head and packaging 1 12360 13430
YP_009187119.1 NC_028653_p57 hypothetical protein phrog_14384 unknown function unknown function -1 46880 47056
YP_009187149.1 NC_028653_p87 hypothetical protein phrog_28946 unknown function unknown function 1 64976 65326
YP_009187063.1 NC_028653_p1 hypothetical protein phrog_15936 membrane protein moron, auxiliary metabolic gene and host takeover 1 51 518
YP_009187148.1 NC_028653_p86 hypothetical protein singleton unknown function unknown function 1 64780 64983
YP_009187105.1 NC_028653_p43 hypothetical protein phrog_18034 transcriptional regulator WhiB-like transcription regulation -1 36758 37105
YP_009187131.1 NC_028653_p69 hypothetical protein phrog_26936 unknown function unknown function 1 53292 54173
YP_009187109.1 NC_028653_p47 hypothetical protein phrog_16741 unknown function unknown function -1 38606 38830
YP_009187076.1 NC_028653_p14 portal protein phrog_104 portal protein head and packaging 1 8211 9800
YP_009187112.1 NC_028653_p50 hypothetical protein singleton unknown function unknown function -1 42428 42589
YP_009187110.1 NC_028653_p48 hypothetical protein phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 38830 42138
YP_009187142.1 NC_028653_p80 hypothetical protein singleton unknown function unknown function 1 58798 59136
YP_009187141.1 NC_028653_p79 hypothetical protein phrog_13451 unknown function unknown function 1 58496 58765
YP_009187074.1 NC_028653_p12 small terminase subunit phrog_7785 HNH endonuclease DNA, RNA and nucleotide metabolism 1 5991 6422
YP_009187129.1 NC_028653_p67 hypothetical protein phrog_12059 unknown function unknown function -1 51696 52721
YP_009187155.1 NC_028653_p93 hypothetical protein phrog_13327 unknown function unknown function 1 66938 67309
YP_009187101.1 NC_028653_p39 hypothetical protein phrog_1298 minor tail protein tail 1 33002 33436
YP_009187095.1 NC_028653_p33 hypothetical protein phrog_416 minor tail protein tail 1 29229 30287
YP_009187092.1 NC_028653_p30 hypothetical protein phrog_110 minor tail protein tail 1 24084 25697
YP_009187125.1 NC_028653_p63 hypothetical protein phrog_19886 unknown function unknown function -1 50412 50618
YP_009187134.1 NC_028653_p72 hypothetical protein singleton unknown function unknown function 1 54913 55671
YP_009187086.1 NC_028653_p24 structural protein phrog_476 major tail protein tail 1 15678 16361
YP_009187091.1 NC_028653_p29 hypothetical protein phrog_106 minor tail protein tail 1 23138 24079
YP_009187077.1 NC_028653_p15 hypothetical protein phrog_1522 head maturation protease head and packaging 1 9797 11185
YP_009187083.1 NC_028653_p21 hypothetical protein phrog_12740 head closure Hc1 connector 1 14387 14779
YP_009187107.1 NC_028653_p45 hypothetical protein phrog_1729 unknown function unknown function -1 37371 37847
YP_009187088.1 NC_028653_p26 tail assembly protein phrog_2624 tail assembly chaperone tail 1 16862 17667
YP_009187064.1 NC_028653_p2 hypothetical protein phrog_29727 unknown function unknown function 1 515 745
YP_009187078.1 NC_028653_p16 hypothetical protein phrog_12880 head scaffolding protein head and packaging 1 11182 11877
YP_009187084.1 NC_028653_p22 hypothetical protein phrog_12236 head-tail connector protein connector 1 14772 15137
YP_009187118.1 NC_028653_p56 hypothetical protein phrog_13499 unknown function unknown function -1 46531 46842
YP_009187067.1 NC_028653_p5 hypothetical protein phrog_13455 unknown function unknown function 1 1435 1704
YP_009187103.1 NC_028653_p41 hypothetical protein phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 33836 36385
YP_009187071.1 NC_028653_p9 hypothetical protein phrog_17388 minor tail protein tail 1 3345 5333
YP_009187072.1 NC_028653_p10 hypothetical protein phrog_13218 unknown function unknown function 1 5351 5530
YP_009187139.1 NC_028653_p77 hypothetical protein singleton unknown function unknown function 1 57782 58288
YP_009187152.1 NC_028653_p90 hypothetical protein phrog_22598 unknown function unknown function 1 65718 65939
YP_009187138.1 NC_028653_p76 hypothetical protein phrog_16405 membrane protein moron, auxiliary metabolic gene and host takeover 1 57064 57753
YP_009187117.1 NC_028653_p55 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 45335 46534
YP_009187069.1 NC_028653_p7 hypothetical protein phrog_102 endolysin lysis 1 2259 2990
YP_009187102.1 NC_028653_p40 hypothetical protein phrog_726 unknown function unknown function 1 33411 33839
YP_009187120.1 NC_028653_p58 hypothetical protein phrog_3848 unknown function unknown function -1 47053 47388
YP_009187143.1 NC_028653_p81 hypothetical protein phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59310 60392
YP_009187108.1 NC_028653_p46 hypothetical protein phrog_1981 unknown function unknown function -1 37878 38609
YP_009187151.1 NC_028653_p89 hypothetical protein singleton unknown function unknown function 1 65585 65725
YP_009187126.1 NC_028653_p64 hypothetical protein phrog_14499 membrane protein moron, auxiliary metabolic gene and host takeover -1 50618 50743
YP_009187075.1 NC_028653_p13 large terminase subunit phrog_9 terminase large subunit head and packaging 1 6443 8170
YP_009187081.1 NC_028653_p19 hypothetical protein phrog_6587 head-tail connector protein connector 1 13433 13885
YP_009187150.1 NC_028653_p88 hypothetical protein singleton unknown function unknown function 1 65323 65595
YP_009187132.1 NC_028653_p70 hypothetical protein phrog_13959 unknown function unknown function 1 54170 54565
YP_009187113.1 NC_028653_p51 hypothetical protein phrog_7933 unknown function unknown function -1 42710 42940
YP_009187104.1 NC_028653_p42 hypothetical protein phrog_14298 unknown function unknown function -1 36397 36801
YP_009187153.1 NC_028653_p91 hypothetical protein phrog_1371 unknown function unknown function 1 66184 66642
YP_009187079.1 NC_028653_p17 hypothetical protein phrog_3583 head decoration head and packaging 1 11895 12320
YP_009187116.1 NC_028653_p54 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 44458 45279
YP_009187127.1 NC_028653_p65 hypothetical protein phrog_14599 unknown function unknown function -1 50740 51213