Genomic map of Enterobacteria phage VT2phi_272 (NC_028656)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028656
Definition
Enterobacteria phage VT2phi_272, complete sequence.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Oslovirus; unclassified Oslovirus.
DB of origin
REFSEQ
Length
65955
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
83
%GC
50.1
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009187347.1 NC_028656_p33 Cro antirepressor phrog_35 transcriptional repressor transcription regulation 1 21513 21716
YP_009187370.1 NC_028656_p56 Bor protein phrog_260 Bor-like outer membrane protein other -1 35429 35722
YP_009187374.1 NC_028656_p60 portal protein phrog_156 portal protein head and packaging 1 38624 40768
YP_009187369.1 NC_028656_p55 Rz lysis protein phrog_13 Rz-like spanin lysis 1 34933 35397
YP_009187344.1 NC_028656_p30 type II restriction enzyme BsuBI phrog_1639 restriction endonuclease DNA, RNA and nucleotide metabolism -1 18190 19143
YP_009187333.1 NC_028656_p19 NinC protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 10748 11626
YP_009187316.1 NC_028656_p2 integrase phrog_1 integrase integration and excision 1 1515 2759
YP_009187387.1 NC_028656_p73 outer membrane protein phrog_557 outer membrane protein other 1 51057 51335
YP_009187368.1 NC_028656_p54 hypothetical protein phrog_4906 unknown function unknown function 1 34791 34925
YP_009187315.1 NC_028656_p1 integrase phrog_1 integrase integration and excision -1 1 1194
YP_009187337.1 NC_028656_p23 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 13562 14149
YP_009187363.1 NC_028656_p49 lysozyme phrog_7 endolysin lysis 1 32086 32619
YP_009187383.1 NC_028656_p69 hypothetical protein phrog_2014 unknown function unknown function 1 47576 47857
YP_009187324.1 NC_028656_p10 hypothetical protein phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 1 6373 6678
YP_009187375.1 NC_028656_p61 hypothetical protein phrog_479 unknown function unknown function 1 40926 41933
YP_009187346.1 NC_028656_p32 repressor protein CI phrog_4 transcriptional repressor transcription regulation -1 20704 21417
YP_009187389.1 NC_028656_p75 outer membrane protein Lom phrog_108 Lom outer membrane protein other 1 52049 52783
YP_009187322.1 NC_028656_p8 addiction module antidote protein phrog_6494 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 5701 5958
YP_009187367.1 NC_028656_p53 anti-repressor protein Ant phrog_524 anti-repressor Ant transcription regulation 1 34213 34776
YP_009187395.1 NC_028656_p81 hypothetical protein phrog_601 unknown function unknown function 1 55085 56350
YP_009187376.1 NC_028656_p62 hypothetical protein phrog_334 major head protein head and packaging 1 41957 43171
YP_009187377.1 NC_028656_p63 hypothetical protein phrog_486 virion structural protein head and packaging 1 43227 43616
YP_009187384.1 NC_028656_p70 hypothetical protein phrog_11089 unknown function unknown function 1 47924 48037
YP_009187332.1 NC_028656_p18 hypothetical protein phrog_1226 unknown function unknown function -1 10548 10751
YP_009187319.1 NC_028656_p5 adenine methylase phrog_359 DNA methyltransferase other -1 3589 4215
YP_009187351.1 NC_028656_p37 DNA primase phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 24129 25100
YP_009187358.1 NC_028656_p44 Shiga toxin 2 B subunit phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 28496 28765
YP_009187341.1 NC_028656_p27 hypothetical protein phrog_1635 unknown function unknown function -1 16106 16387
YP_009187348.1 NC_028656_p34 hypothetical protein phrog_852 unknown function unknown function 1 21747 22040
YP_009187356.1 NC_028656_p42 hypothetical protein singleton unknown function unknown function 1 27044 27142
YP_009187360.1 NC_028656_p46 hypothetical protein phrog_9558 unknown function unknown function 1 31185 31310
YP_009187361.1 NC_028656_p47 hypothetical protein phrog_8301 unknown function unknown function 1 31369 31788
YP_009187396.1 NC_028656_p82 hypothetical protein phrog_616 unknown function unknown function 1 56381 64801
YP_009187388.1 NC_028656_p74 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 51341 51958
YP_009187330.1 NC_028656_p16 hypothetical protein phrog_250 unknown function unknown function -1 9372 10319
YP_009187323.1 NC_028656_p9 lipoprotein phrog_9924 unknown function unknown function 1 6072 6284
YP_009187371.1 NC_028656_p57 hypothetical protein phrog_6954 Rz-like spanin lysis 1 35830 36075
YP_009187381.1 NC_028656_p67 tail fiber protein phrog_366 tail fiber protein tail 1 45321 47258
YP_009187390.1 NC_028656_p76 hypothetical protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover 1 53016 53156
YP_009187339.1 NC_028656_p25 RecT protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 14835 15785
YP_009187328.1 NC_028656_p14 hypothetical protein phrog_20982 unknown function unknown function 1 8506 8802
YP_009187393.1 NC_028656_p79 hypothetical protein phrog_596 unknown function unknown function 1 54367 54813
YP_009187397.1 NC_028656_p83 hypothetical protein phrog_12662 unknown function unknown function -1 65023 65955
YP_009187340.1 NC_028656_p26 hypothetical protein phrog_1050 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 15804 16085
YP_009187335.1 NC_028656_p21 hypothetical protein phrog_210 unknown function unknown function -1 12254 13075
YP_009187325.1 NC_028656_p11 antirepressor protein phrog_1726 anti-repressor transcription regulation -1 6721 7377
YP_009187317.1 NC_028656_p3 hypothetical protein phrog_1888 unknown function unknown function -1 3004 3381
YP_009187362.1 NC_028656_p48 holin phrog_20 holin lysis 1 31866 32081
YP_009187350.1 NC_028656_p36 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 22619 24139
YP_009187359.1 NC_028656_p45 hypothetical protein phrog_143 unknown function unknown function 1 29251 31188
YP_009187320.1 NC_028656_p6 hypothetical protein phrog_1680 unknown function unknown function -1 4212 4643
YP_009187343.1 NC_028656_p29 phage regulatory protein phrog_995 transcriptional regulator transcription regulation -1 16682 17329
YP_009187365.1 NC_028656_p51 transposase phrog_157 transposase integration and excision -1 32946 33836
YP_009187355.1 NC_028656_p41 Q antiterminator protein phrog_79 anti-termination protein Q-like transcription regulation 1 26304 26738
YP_009187342.1 NC_028656_p28 Kil protein phrog_294 Kil protein for bacterial septation inhibition other -1 16399 16611
YP_009187353.1 NC_028656_p39 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 25554 26120
YP_009187354.1 NC_028656_p40 NinH protein phrog_268 unknown function unknown function 1 26117 26311
YP_009187349.1 NC_028656_p35 hypothetical protein phrog_1347 unknown function unknown function 1 22248 22625
YP_009187385.1 NC_028656_p71 hypothetical protein phrog_511 internal virion protein head and packaging 1 48074 49777
YP_009187378.1 NC_028656_p64 hypothetical protein phrog_482 unknown function unknown function 1 43666 44127
YP_009187326.1 NC_028656_p12 hypothetical protein phrog_60 unknown function unknown function -1 7553 8176
YP_009187380.1 NC_028656_p66 hypothetical protein phrog_399 structural protein head and packaging 1 44674 45324
YP_009187391.1 NC_028656_p77 hypothetical protein phrog_610 unknown function unknown function 1 53237 53614
YP_009187338.1 NC_028656_p24 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 14149 14838
YP_009187386.1 NC_028656_p72 hypothetical protein phrog_496 tail fiber protein tail 1 49828 51042
YP_009187331.1 NC_028656_p17 hypothetical protein phrog_1344 unknown function unknown function -1 10316 10555
YP_009187372.1 NC_028656_p58 terminase small subunit phrog_370 terminase small subunit head and packaging 1 36131 36937
YP_009187357.1 NC_028656_p43 Shiga toxin 2 A subunit phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 27525 28484
YP_009187394.1 NC_028656_p80 hypothetical protein phrog_594 unknown function unknown function 1 54823 55074
YP_009187379.1 NC_028656_p65 hypothetical protein phrog_437 virion structural protein head and packaging 1 44111 44674
YP_009187336.1 NC_028656_p22 hypothetical protein phrog_204 unknown function unknown function -1 13139 13486
YP_009187327.1 NC_028656_p13 hypothetical protein phrog_2821 unknown function unknown function -1 8180 8467
YP_009187392.1 NC_028656_p78 hypothetical protein phrog_611 unknown function unknown function 1 53708 54364
YP_009187382.1 NC_028656_p68 prophage tail fibre C-terminus family protein phrog_576 tail fiber protein tail 1 47140 47529
YP_009187329.1 NC_028656_p15 hypothetical protein phrog_6847 unknown function unknown function -1 8864 9370
YP_009187345.1 NC_028656_p31 modification methylase BsuBI phrog_1600 DNA methyltransferase other -1 19140 20609
YP_009187321.1 NC_028656_p7 hypothetical protein phrog_1760 anti-repressor transcription regulation -1 4699 5376
YP_009187373.1 NC_028656_p59 large subunit terminase phrog_2 terminase large subunit head and packaging 1 36918 38624
YP_009187352.1 NC_028656_p38 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 25100 25549
YP_009187364.1 NC_028656_p50 hypothetical protein phrog_30041 unknown function unknown function 1 32492 32704
YP_009187334.1 NC_028656_p20 hypothetical protein phrog_1363 unknown function unknown function -1 11734 12177
YP_009187318.1 NC_028656_p4 hypothetical protein phrog_292 unknown function unknown function -1 3417 3629
YP_009187366.1 NC_028656_p52 IS629 transposase orfA phrog_151 transposase integration and excision -1 33833 34159