Genomic map of Gordonia phage GTE6 (NC_028665)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028665
Definition
Gordonia phage GTE6, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
56982
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
67.79
Number of singletons
31
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009188439.1 NC_028665_p71 hypothetical protein phrog_15317 unknown function unknown function 1 51011 51286
YP_009188386.1 NC_028665_p18 hypothetical protein phrog_18402 head maturation protease head and packaging 1 11027 13879
YP_009188417.1 NC_028665_p49 hypothetical protein singleton unknown function unknown function 1 41493 41639
YP_009188444.1 NC_028665_p76 hypothetical protein singleton unknown function unknown function 1 52833 53069
YP_009188372.1 NC_028665_p4 hypothetical protein singleton unknown function unknown function 1 2723 2923
YP_009188421.1 NC_028665_p53 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 42181 43176
YP_009188428.1 NC_028665_p60 hypothetical protein singleton unknown function unknown function 1 45562 46041
YP_009188434.1 NC_028665_p66 hypothetical protein singleton unknown function unknown function 1 47732 48301
YP_009188420.1 NC_028665_p52 hypothetical protein singleton unknown function unknown function 1 42014 42178
YP_009188385.1 NC_028665_p17 hypothetical protein phrog_17748 unknown function unknown function 1 10760 10981
YP_009188394.1 NC_028665_p26 hypothetical protein singleton unknown function unknown function 1 19842 20135
YP_009188406.1 NC_028665_p38 lysin phrog_2998 endolysin lysis 1 34411 36045
YP_009188451.1 NC_028665_p83 hypothetical protein singleton unknown function unknown function 1 55078 55488
YP_009188445.1 NC_028665_p77 hypothetical protein singleton unknown function unknown function 1 53066 53278
YP_009188435.1 NC_028665_p67 hypothetical protein singleton unknown function unknown function 1 48354 49775
YP_009188432.1 NC_028665_p64 hypothetical protein singleton unknown function unknown function 1 47088 47441
YP_009188380.1 NC_028665_p12 hypothetical protein phrog_4980 superinfection exclusion moron, auxiliary metabolic gene and host takeover 1 5362 5802
YP_009188402.1 NC_028665_p34 hypothetical protein phrog_7719 minor tail protein tail 1 30398 31678
YP_009188440.1 NC_028665_p72 hypothetical protein phrog_30480 unknown function unknown function 1 51283 51579
YP_009188404.1 NC_028665_p36 hypothetical protein phrog_8780 minor tail protein tail 1 32032 33609
YP_009188416.1 NC_028665_p48 hypothetical protein phrog_14395 unknown function unknown function 1 40982 41434
YP_009188376.1 NC_028665_p8 hypothetical protein phrog_21555 unknown function unknown function 1 3969 4424
YP_009188375.1 NC_028665_p7 hypothetical protein singleton unknown function unknown function 1 3774 3965
YP_009188414.1 NC_028665_p46 hypothetical protein singleton unknown function unknown function 1 39613 39906
YP_009188377.1 NC_028665_p9 hypothetical protein singleton unknown function unknown function 1 4474 4629
YP_009188389.1 NC_028665_p21 hypothetical protein phrog_779 unknown function unknown function 1 16242 17072
YP_009188447.1 NC_028665_p79 DNA polymerase III subunit epsilon phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 53903 54592
YP_009188408.1 NC_028665_p40 hypothetical protein phrog_1298 minor tail protein tail 1 36569 37060
YP_009188373.1 NC_028665_p5 hypothetical protein singleton unknown function unknown function 1 2923 3546
YP_009188454.1 NC_028665_p86 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 1 56599 56850
YP_009188411.1 NC_028665_p43 hypothetical protein phrog_5984 unknown function unknown function 1 38035 38283
YP_009188413.1 NC_028665_p45 hypothetical protein phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 38462 39616
YP_009188378.1 NC_028665_p10 hypothetical protein phrog_13451 unknown function unknown function 1 4626 4880
YP_009188405.1 NC_028665_p37 hypothetical protein phrog_2804 virion structural protein head and packaging 1 33622 34326
YP_009188384.1 NC_028665_p16 structural protein phrog_18477 head morphogenesis head and packaging 1 8361 10763
YP_009188410.1 NC_028665_p42 hypothetical protein phrog_17370 unknown function unknown function 1 37596 38033
YP_009188431.1 NC_028665_p63 holliday junction resolvase singleton unknown function unknown function 1 46835 47095
YP_009188382.1 NC_028665_p14 structural protein phrog_776 portal protein head and packaging 1 6302 7978
YP_009188443.1 NC_028665_p75 hypothetical protein phrog_415 polynucleotide kinase other 1 52375 52836
YP_009188407.1 NC_028665_p39 holin phrog_443 holin lysis 1 36058 36567
YP_009188381.1 NC_028665_p13 hypothetical protein phrog_781 unknown function unknown function 1 5949 6287
YP_009188448.1 NC_028665_p80 hypothetical protein singleton unknown function unknown function 1 54589 54744
YP_009188403.1 NC_028665_p35 hypothetical protein phrog_1126 unknown function unknown function 1 31697 32035
YP_009188429.1 NC_028665_p61 hypothetical protein singleton unknown function unknown function 1 46038 46202
YP_009188395.1 NC_028665_p27 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20119 20550
YP_009188399.1 NC_028665_p31 hypothetical protein phrog_106 minor tail protein tail 1 27069 28046
YP_009188369.1 NC_028665_p1 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 65 625
YP_009188379.1 NC_028665_p11 hypothetical protein phrog_33706 unknown function unknown function 1 4914 5237
YP_009188446.1 NC_028665_p78 hypothetical protein singleton unknown function unknown function 1 53343 53906
YP_009188393.1 NC_028665_p25 hypothetical protein phrog_810 unknown function unknown function 1 19274 19837
YP_009188436.1 NC_028665_p68 hypothetical protein singleton unknown function unknown function 1 49772 50149
YP_009188387.1 NC_028665_p19 hypothetical protein phrog_14225 unknown function unknown function 1 14009 14155
YP_009188452.1 NC_028665_p84 hypothetical protein phrog_17681 unknown function unknown function 1 55485 55895
YP_009188392.1 NC_028665_p24 hypothetical protein phrog_783 head-tail adaptor connector 1 18480 19277
YP_009188383.1 NC_028665_p15 hypothetical protein phrog_14528 unknown function unknown function 1 7975 8361
YP_009188424.1 NC_028665_p56 hypothetical protein phrog_33110 unknown function unknown function 1 43844 44005
YP_009188423.1 NC_028665_p55 hypothetical protein singleton unknown function unknown function 1 43476 43847
YP_009188453.1 NC_028665_p85 hypothetical protein singleton unknown function unknown function 1 55892 56542
YP_009188397.1 NC_028665_p29 hypothetical protein phrog_13927 unknown function unknown function 1 21222 21899
YP_009188419.1 NC_028665_p51 hypothetical protein singleton unknown function unknown function 1 41823 42017
YP_009188390.1 NC_028665_p22 hypothetical protein phrog_14463 unknown function unknown function 1 17086 17577
YP_009188430.1 NC_028665_p62 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 46212 46838
YP_009188401.1 NC_028665_p33 hypothetical protein phrog_32570 unknown function unknown function 1 29712 30401
YP_009188425.1 NC_028665_p57 hypothetical protein phrog_16769 unknown function unknown function 1 44002 44412
YP_009188400.1 NC_028665_p32 hypothetical protein phrog_110 minor tail protein tail 1 28048 29667
YP_009188422.1 NC_028665_p54 hypothetical protein phrog_25695 unknown function unknown function 1 43173 43394
YP_009188426.1 NC_028665_p58 cutinase phrog_102 endolysin lysis 1 44409 45188
YP_009188415.1 NC_028665_p47 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39899 40960
YP_009188374.1 NC_028665_p6 hypothetical protein singleton unknown function unknown function 1 3543 3758
YP_009188409.1 NC_028665_p41 hypothetical protein phrog_726 unknown function unknown function 1 37057 37491
YP_009188442.1 NC_028665_p74 hypothetical protein singleton unknown function unknown function 1 52172 52378
YP_009188449.1 NC_028665_p81 hypothetical protein singleton unknown function unknown function 1 54741 54896
YP_009188437.1 NC_028665_p69 hypothetical protein phrog_17794 unknown function unknown function 1 50250 50750
YP_009188371.1 NC_028665_p3 hypothetical protein singleton unknown function unknown function 1 2277 2726
YP_009188412.1 NC_028665_p44 hypothetical protein phrog_926 unknown function unknown function 1 38280 38465
YP_009188396.1 NC_028665_p28 hypothetical protein phrog_14331 unknown function unknown function 1 20594 21208
YP_009188388.1 NC_028665_p20 structural protein phrog_777 major head protein head and packaging 1 14261 16150
YP_009188438.1 NC_028665_p70 hypothetical protein phrog_13001 unknown function unknown function 1 50747 51001
YP_009188418.1 NC_028665_p50 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 41632 41817
YP_009188433.1 NC_028665_p65 hypothetical protein singleton unknown function unknown function 1 47434 47742
YP_009188441.1 NC_028665_p73 hypothetical protein singleton unknown function unknown function 1 51576 52175
YP_009188450.1 NC_028665_p82 hypothetical protein singleton unknown function unknown function 1 54893 55081
YP_009188370.1 NC_028665_p2 large terminase subunit phrog_38 terminase large subunit head and packaging 1 622 2220
YP_009188391.1 NC_028665_p23 structural protein phrog_792 major tail protein tail 1 17681 18376
YP_009188398.1 NC_028665_p30 tape measure protein phrog_6090 tail length tape measure protein tail 1 21946 27066
YP_009188427.1 NC_028665_p59 hypothetical protein singleton unknown function unknown function 1 45185 45565