| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028667 |
Definition |
Pseudomonas phage vB_PaeS_PM105. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Beetrevirus; Pseudomonas virus PM105. |
DB of origin |
REFSEQ |
Length |
39593 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
63.09 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009188542.1 | NC_028667_p31 | terminase, large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 15901 | 17604 |
| YP_009188531.1 | NC_028667_p20 | repressor protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 11008 | 11400 |
| YP_009188561.1 | NC_028667_p49 | FAD/FMN-containing dehydrogenase | phrog_778 | tail assembly protein | tail | 1 | 34347 | 35165 |
| YP_009188559.1 | NC_028667_p47 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 31728 | 32651 |
| YP_009188554.1 | NC_028667_p43 | tail sheath protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 25428 | 26180 |
| YP_009188522.1 | NC_028667_p11 | transposase B subunit | phrog_296 | DNA transposition protein | integration and excision | -1 | 4452 | 5621 |
| YP_009188533.1 | NC_028667_p22 | hypothetical protein | phrog_35734 | unknown function | unknown function | -1 | 11679 | 12578 |
| YP_009188514.1 | NC_028667_p3 | hypothetical protein | phrog_5249 | unknown function | unknown function | -1 | 1036 | 1503 |
| YP_009188519.1 | NC_028667_p8 | hypothetical protein | phrog_6574 | unknown function | unknown function | -1 | 3196 | 3807 |
| YP_009188513.1 | NC_028667_p2 | hypothetical protein similar to mu GemA | phrog_286 | unknown function | unknown function | -1 | 486 | 1049 |
| YP_009188524.1 | NC_028667_p13 | hypothetical protein | phrog_1748 | unknown function | unknown function | -1 | 7404 | 8360 |
| YP_009188560.1 | NC_028667_p48 | hypothetical protein | phrog_1082 | tail assembly protein | tail | 1 | 32654 | 34360 |
| YP_009188526.1 | NC_028667_p15 | hypothetical protein | phrog_6525 | unknown function | unknown function | -1 | 8714 | 8974 |
| YP_009188534.2 | NC_028667_p23 | holin protein | phrog_1528 | holin | lysis | 1 | 12752 | 13048 |
| YP_009188516.1 | NC_028667_p5 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 1696 | 2385 |
| YP_009188544.1 | NC_028667_p33 | head morphogenesis protein | phrog_220 | minor head protein and DNA pilot | head and packaging | 1 | 19082 | 20332 |
| YP_009188515.1 | NC_028667_p4 | hypothetical protein | phrog_3223 | unknown function | unknown function | -1 | 1503 | 1694 |
| YP_009188538.1 | NC_028667_p27 | Rz lysis protein | phrog_1403 | Rz-like spanin | lysis | 1 | 14016 | 14627 |
| YP_009188512.1 | NC_028667_p1 | mor transcriptional regulator | phrog_532 | late transcriptional activator | transcription regulation | -1 | 124 | 483 |
| YP_009188552.1 | NC_028667_p41 | hypothetical protein | phrog_209 | portal protein | head and packaging | 1 | 24763 | 25218 |
| YP_009188543.1 | NC_028667_p32 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 17604 | 19082 |
| YP_009188532.1 | NC_028667_p21 | hypothetical protein | phrog_33280 | unknown function | unknown function | 1 | 11420 | 11623 |
| YP_009188517.1 | NC_028667_p6 | hypothetical protein | phrog_846 | unknown function | unknown function | -1 | 2387 | 3010 |
| YP_009188562.1 | NC_028667_p50 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 35182 | 35412 |
| YP_009188564.1 | NC_028667_p52 | hypothetical protein | phrog_1101 | tail protein | tail | 1 | 35626 | 37836 |
| YP_009188528.1 | NC_028667_p17 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9581 | 10261 |
| YP_009188539.1 | NC_028667_p28 | lipoprotein protein | phrog_462 | lipoprotein | other | 1 | 14631 | 15020 |
| YP_009188553.1 | NC_028667_p42 | hypothetical protein | phrog_3357 | unknown function | unknown function | 1 | 25215 | 25424 |
| YP_009188537.1 | NC_028667_p26 | hypothetical protein | phrog_6410 | unknown function | unknown function | 1 | 13832 | 14029 |
| YP_009188549.1 | NC_028667_p38 | hypothetical protein | phrog_21052 | unknown function | unknown function | 1 | 23724 | 23918 |
| YP_009188546.1 | NC_028667_p35 | protease protein | phrog_976 | head maturation protease | head and packaging | 1 | 21117 | 22355 |
| YP_009188535.1 | NC_028667_p24 | hypothetical protein | phrog_5479 | unknown function | unknown function | 1 | 13051 | 13209 |
| YP_009188527.1 | NC_028667_p16 | hypothetical protein | phrog_101 | CII-like transcriptional activator | transcription regulation | -1 | 8967 | 9455 |
| YP_009188530.1 | NC_028667_p19 | hypothetical protein | phrog_925 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 10654 | 10863 |
| YP_009188550.1 | NC_028667_p39 | hypothetical protein | phrog_717 | unknown function | unknown function | 1 | 23918 | 24244 |
| YP_009188548.1 | NC_028667_p37 | capsid protein | phrog_1005 | major head protein | head and packaging | 1 | 22748 | 23677 |
| YP_009188545.1 | NC_028667_p34 | virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 20329 | 20898 |
| YP_009188547.1 | NC_028667_p36 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 22359 | 22736 |
| YP_009188540.1 | NC_028667_p29 | hypothetical protein | phrog_436 | unknown function | unknown function | 1 | 15010 | 15318 |
| YP_009188563.1 | NC_028667_p51 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 35409 | 35639 |
| YP_009188567.1 | NC_028667_p55 | hypothetical protein | phrog_2687 | unknown function | unknown function | 1 | 38977 | 39198 |
| YP_009188523.1 | NC_028667_p12 | transposase A subunit | phrog_310 | transposase | integration and excision | -1 | 5621 | 7399 |
| YP_009188566.1 | NC_028667_p54 | hypothetical protein | phrog_2398 | unknown function | unknown function | 1 | 38678 | 38980 |
| YP_009188529.1 | NC_028667_p18 | hypothetical protein | phrog_23931 | unknown function | unknown function | 1 | 10288 | 10608 |
| YP_009188518.1 | NC_028667_p7 | hypothetical protein | phrog_4446 | unknown function | unknown function | -1 | 3003 | 3203 |
| YP_009188541.1 | NC_028667_p30 | terminase, small subunit | phrog_426 | terminase small subunit | head and packaging | 1 | 15324 | 15899 |
| YP_009188521.1 | NC_028667_p10 | hypothetical protein | phrog_2043 | unknown function | unknown function | -1 | 4109 | 4450 |
| YP_009188520.1 | NC_028667_p9 | hypothetical protein | phrog_6655 | unknown function | unknown function | -1 | 3807 | 4112 |
| YP_009188551.1 | NC_028667_p40 | hypothetical protein | phrog_195 | head-tail adaptor | connector | 1 | 24252 | 24761 |
| YP_009188555.1 | NC_028667_p44 | hypothetical protein | phrog_1442 | tail assembly chaperone | tail | 1 | 26182 | 26688 |
| YP_009188558.1 | NC_028667_p46 | hypothetical protein | phrog_687 | structural protein | head and packaging | 1 | 30766 | 31725 |
| YP_009188568.1 | NC_028667_p56 | hypothetical protein | phrog_2623 | unknown function | unknown function | 1 | 39277 | 39501 |
| YP_009188525.1 | NC_028667_p14 | Transcriptional regulator, IclR family | phrog_1368 | transcriptional regulator | transcription regulation | -1 | 8418 | 8717 |
| YP_009188565.1 | NC_028667_p53 | hypothetical protein | phrog_14458 | tail fiber protein | tail | 1 | 37833 | 38678 |
| YP_009188536.1 | NC_028667_p25 | transglycosylase SLT domain protein | phrog_669 | endolysin | lysis | 1 | 13206 | 13835 |
| YP_009188557.1 | NC_028667_p45 | tail length tape-measure protein | phrog_24 | tail length tape measure protein | tail | 1 | 26915 | 30766 |