Genomic map of Gordonia phage GMA7 (NC_028673)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028673
Definition
Gordonia phage GMA7, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Getseptimavirus; Gordonia virus GMA7.
DB of origin
REFSEQ
Length
73419
Host Name
Gordonia malaquae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
101
%GC
56.61
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009189173.1 NC_028673_p36 hypothetical protein phrog_6890 endonuclease DNA, RNA and nucleotide metabolism -1 37757 38170
YP_009189180.1 NC_028673_p43 hypothetical protein singleton unknown function unknown function -1 41380 41505
YP_009189143.1 NC_028673_p6 hypothetical protein phrog_6679 unknown function unknown function 1 6743 6994
YP_009189207.1 NC_028673_p70 hypothetical protein phrog_29792 unknown function unknown function -1 55725 55952
YP_009189190.1 NC_028673_p53 hypothetical protein phrog_5686 unknown function unknown function -1 47654 48700
YP_009189221.1 NC_028673_p84 hypothetical protein phrog_32299 unknown function unknown function -1 64592 64843
YP_009189169.1 NC_028673_p32 hypothetical protein phrog_2525 unknown function unknown function 1 35508 35840
YP_009189150.1 NC_028673_p13 hypothetical protein phrog_26 tail completion or Neck1 protein connector 1 11072 11467
YP_009189188.1 NC_028673_p51 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 45296 46927
YP_009189152.1 NC_028673_p15 hypothetical protein phrog_8128 neck protein connector 1 11962 12267
YP_009189219.1 NC_028673_p82 hypothetical protein phrog_10550 unknown function unknown function -1 64219 64500
YP_009189178.1 NC_028673_p41 lysin phrog_102 endolysin lysis -1 39997 40896
YP_009189154.1 NC_028673_p17 tail assembly protein phrog_3096 tail assembly chaperone tail 1 13487 14337
YP_009189159.1 NC_028673_p22 hypothetical protein phrog_346 minor tail protein tail 1 27899 30667
YP_009189142.1 NC_028673_p5 hypothetical protein phrog_22653 unknown function unknown function 1 6434 6661
YP_009189232.1 NC_028673_p95 hypothetical protein phrog_7062 unknown function unknown function -1 69120 69380
YP_009189195.1 NC_028673_p58 hypothetical protein phrog_6792 unknown function unknown function -1 50297 50746
YP_009189176.1 NC_028673_p39 hypothetical protein phrog_8142 unknown function unknown function -1 39504 39770
YP_009189156.1 NC_028673_p19 tape measure protein phrog_5448 tail length tape measure protein tail 1 14475 23615
YP_009189149.1 NC_028673_p12 hypothetical protein phrog_195 head-tail adaptor connector 1 10464 10979
YP_009189177.1 NC_028673_p40 hypothetical protein phrog_1673 unknown function unknown function -1 39767 40000
YP_009189164.1 NC_028673_p27 hypothetical protein phrog_6901 unknown function unknown function 1 32848 33171
YP_009189165.1 NC_028673_p28 lysozyme phrog_880 endolysin lysis 1 33168 33803
YP_009189162.1 NC_028673_p25 hypothetical protein phrog_240 head protein head and packaging 1 31966 32343
YP_009189138.1 NC_028673_p1 small terminase subunit phrog_6902 terminase small subunit head and packaging 1 42 1499
YP_009189186.1 NC_028673_p49 DNA binding protein phrog_6401 DNA binding protein DNA, RNA and nucleotide metabolism -1 44581 44766
YP_009189194.1 NC_028673_p57 hypothetical protein phrog_6622 unknown function unknown function -1 49665 50288
YP_009189184.1 NC_028673_p47 DNA polymerase III beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 42624 43763
YP_009189182.1 NC_028673_p45 hypothetical protein phrog_31235 unknown function unknown function -1 42103 42255
YP_009189237.1 NC_028673_p100 hypothetical protein phrog_926 unknown function unknown function -1 72341 72520
YP_009189198.1 NC_028673_p61 hypothetical protein phrog_18683 unknown function unknown function -1 51895 52239
YP_009189139.1 NC_028673_p2 large terminase subunit phrog_2 terminase large subunit head and packaging 1 1492 3459
YP_009189223.1 NC_028673_p86 hypothetical protein phrog_34796 unknown function unknown function -1 65115 65279
YP_009189229.1 NC_028673_p92 hypothetical protein singleton unknown function unknown function -1 67467 67901
YP_009189153.1 NC_028673_p16 major tail protein phrog_290 minor tail protein tail 1 12271 13290
YP_009189217.1 NC_028673_p80 hypothetical protein phrog_38745 unknown function unknown function -1 62617 62874
YP_009189209.1 NC_028673_p72 ATPase family protein phrog_5424 ATPase other -1 57807 59429
YP_009189155.1 NC_028673_p18 tail assembly protein phrog_3096 tail assembly chaperone tail 1 13487 14077
YP_009189157.1 NC_028673_p20 hypothetical protein phrog_5287 minor tail protein tail 1 23615 26158
YP_009189181.1 NC_028673_p44 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 41535 42110
YP_009189231.1 NC_028673_p94 hypothetical protein phrog_9619 unknown function unknown function -1 68674 69123
YP_009189148.1 NC_028673_p11 hypothetical protein phrog_6879 head-tail connector protein connector 1 10200 10454
YP_009189199.1 NC_028673_p62 hypothetical protein phrog_7963 unknown function unknown function -1 52243 52506
YP_009189193.1 NC_028673_p56 hypothetical protein phrog_8296 unknown function unknown function -1 49477 49665
YP_009189141.1 NC_028673_p4 hypothetical protein phrog_35416 unknown function unknown function 1 5276 6424
YP_009189227.1 NC_028673_p90 hypothetical protein phrog_30807 unknown function unknown function -1 66414 66899
YP_009189161.1 NC_028673_p24 hypothetical protein phrog_6030 unknown function unknown function 1 31671 31964
YP_009189187.1 NC_028673_p50 hypothetical protein phrog_29331 unknown function unknown function -1 45045 45296
YP_009189196.1 NC_028673_p59 hypothetical protein phrog_6495 unknown function unknown function -1 50784 51029
YP_009189214.1 NC_028673_p77 hypothetical protein phrog_29967 unknown function unknown function -1 61570 61806
YP_009189145.1 NC_028673_p8 hypothetical protein phrog_5455 head decoration head and packaging 1 8221 8700
YP_009189211.1 NC_028673_p74 hypothetical protein phrog_7001 unknown function unknown function -1 60152 60526
YP_009189234.1 NC_028673_p97 hypothetical protein phrog_7096 unknown function unknown function -1 71617 71850
YP_009189151.1 NC_028673_p14 hypothetical protein phrog_5299 unknown function unknown function 1 11464 11949
YP_009189172.1 NC_028673_p35 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 36338 37540
YP_009189226.1 NC_028673_p89 hypothetical protein singleton unknown function unknown function -1 66094 66327
YP_009189201.1 NC_028673_p64 hypothetical protein phrog_21323 unknown function unknown function -1 53399 53545
YP_009189230.1 NC_028673_p93 hypothetical protein phrog_33259 unknown function unknown function -1 68439 68672
YP_009189144.1 NC_028673_p7 hypothetical protein phrog_976 head maturation protease head and packaging 1 7009 8187
YP_009189168.1 NC_028673_p31 hypothetical protein phrog_2344 unknown function unknown function 1 35045 35515
YP_009189160.1 NC_028673_p23 hypothetical protein phrog_416 minor tail protein tail 1 30667 31671
YP_009189224.1 NC_028673_p87 hypothetical protein phrog_31141 unknown function unknown function -1 65276 65578
YP_009189147.1 NC_028673_p10 hypothetical protein phrog_7074 head-tail connector protein connector 1 9931 10125
YP_009189213.1 NC_028673_p76 hypothetical protein phrog_6032 unknown function unknown function -1 60699 61589
YP_009189191.1 NC_028673_p54 hypothetical protein phrog_6746 unknown function unknown function -1 48834 49136
YP_009189236.1 NC_028673_p99 hypothetical protein phrog_7609 unknown function unknown function -1 71935 72309
YP_009189220.1 NC_028673_p83 hypothetical protein phrog_36576 unknown function unknown function -1 64497 64619
YP_009189218.1 NC_028673_p81 hypothetical protein phrog_6708 unknown function unknown function -1 63157 64095
YP_009189174.1 NC_028673_p37 hypothetical protein phrog_34420 unknown function unknown function -1 38252 38365
YP_009189163.1 NC_028673_p26 hypothetical protein phrog_565 holin lysis 1 32429 32848
YP_009189146.1 NC_028673_p9 major capsid protein phrog_29 major head protein head and packaging 1 8712 9914
YP_009189215.1 NC_028673_p78 hypothetical protein phrog_38316 unknown function unknown function -1 61803 61985
YP_009189200.1 NC_028673_p63 hypothetical protein phrog_5406 unknown function unknown function -1 52668 53402
YP_009189175.1 NC_028673_p38 DNA methylase phrog_67 DNA methyltransferase other -1 38788 39507
YP_009189197.1 NC_028673_p60 hypothetical protein phrog_29372 unknown function unknown function -1 51045 51902
YP_009189206.1 NC_028673_p69 hypothetical protein phrog_1581 unknown function unknown function -1 55489 55728
YP_009189210.1 NC_028673_p73 hypothetical protein phrog_7008 unknown function unknown function -1 59511 60140
YP_009189203.1 NC_028673_p66 hypothetical protein phrog_6646 unknown function unknown function -1 53977 54399
YP_009189205.1 NC_028673_p68 hypothetical protein phrog_9086 unknown function unknown function -1 55074 55277
YP_009189233.1 NC_028673_p96 primase phrog_5311 helicase DNA, RNA and nucleotide metabolism -1 69377 71620
YP_009189235.1 NC_028673_p98 hypothetical protein phrog_8352 unknown function unknown function -1 71825 71938
YP_009189140.1 NC_028673_p3 hypothetical protein phrog_113 portal protein head and packaging 1 3574 5289
YP_009189204.1 NC_028673_p67 hypothetical protein phrog_1342 unknown function unknown function -1 54513 55064
YP_009189208.1 NC_028673_p71 hypothetical protein phrog_5298 cobalamin biosynthesis protein moron, auxiliary metabolic gene and host takeover -1 55949 57772
YP_009189158.1 NC_028673_p21 hypothetical protein phrog_1887 tail protein tail 1 26160 27899
YP_009189192.1 NC_028673_p55 hypothetical protein phrog_7044 unknown function unknown function -1 49133 49471
YP_009189212.1 NC_028673_p75 hypothetical protein phrog_30899 unknown function unknown function -1 60584 60712
YP_009189185.1 NC_028673_p48 endonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 43964 44584
YP_009189183.1 NC_028673_p46 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 42269 42634
YP_009189171.1 NC_028673_p34 hypothetical protein singleton unknown function unknown function -1 36225 36341
YP_009189179.1 NC_028673_p42 hypothetical protein phrog_3301 pyrophosphatase other -1 40898 41383
YP_009189202.1 NC_028673_p65 hypothetical protein phrog_18170 unknown function unknown function -1 53545 53802
YP_009189216.1 NC_028673_p79 hypothetical protein phrog_35826 unknown function unknown function -1 61982 62356
YP_009189167.1 NC_028673_p30 holin singleton unknown function unknown function 1 34824 35057
YP_009189170.1 NC_028673_p33 hypothetical protein phrog_37170 unknown function unknown function -1 35837 36241
YP_009189222.1 NC_028673_p85 hypothetical protein phrog_9304 unknown function unknown function -1 64858 65061
YP_009189166.1 NC_028673_p29 peptidase phrog_6985 endolysin lysis 1 33800 34627
YP_009189238.1 NC_028673_p101 hypothetical protein phrog_5362 DNA primase DNA, RNA and nucleotide metabolism -1 72517 73353
YP_009189189.1 NC_028673_p52 hypothetical protein phrog_7649 unknown function unknown function -1 46931 47533
YP_009189225.1 NC_028673_p88 hypothetical protein phrog_38253 unknown function unknown function -1 65690 65980
YP_009189228.1 NC_028673_p91 hypothetical protein singleton unknown function unknown function -1 67218 67400