Genomic map of Acinetobacter phage phiAB1 (NC_028675)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028675
Definition
Acinetobacter phage phiAB1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus.
DB of origin
REFSEQ
Length
41526
Host Name
Acinetobacter baumannii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
39.08
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009189379.1 NC_028675_p40 internal virion core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 31614 34712
YP_009189345.1 NC_028675_p6 hypothetical protein singleton unknown function unknown function 1 4025 4132
YP_009189370.1 NC_028675_p31 head-tail connector protein phrog_449 head-tail adaptor connector 1 20966 22522
YP_009189368.1 NC_028675_p29 hypothetical protein phrog_5394 unknown function unknown function 1 20512 20709
YP_009189340.1 NC_028675_p1 hypothetical protein phrog_1448 unknown function unknown function 1 1574 2083
YP_009189381.1 NC_028675_p42 holin phrog_126 holin/anti-holin lysis 1 37484 37813
YP_009189366.1 NC_028675_p27 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 17333 17983
YP_009189357.1 NC_028675_p18 DnaQ-like exonuclease domain-like protein phrog_9556 DNA polymerase DNA, RNA and nucleotide metabolism 1 10244 11104
YP_009189343.1 NC_028675_p4 hypothetical protein phrog_7131 unknown function unknown function 1 2781 3377
YP_009189359.1 NC_028675_p20 DNA polymerase A domain-like protein phrog_2573 DNA polymerase DNA, RNA and nucleotide metabolism 1 11494 12978
YP_009189375.1 NC_028675_p36 tail tubular protein A phrog_446 tail protein tail 1 25106 25732
YP_009189383.1 NC_028675_p44 DNA maturase A phrog_891 terminase small subunit head and packaging 1 38476 38784
YP_009189358.1 NC_028675_p19 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11088 11525
YP_009189367.1 NC_028675_p28 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 17992 20409
YP_009189348.1 NC_028675_p9 hypothetical protein phrog_7079 unknown function unknown function 1 5137 5304
YP_009189361.1 NC_028675_p22 hypothetical protein phrog_862 unknown function unknown function 1 13484 14374
YP_009189371.1 NC_028675_p32 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 22531 23391
YP_009189380.1 NC_028675_p41 tail fiber phrog_3918 tail fiber protein tail 1 34719 37367
YP_009189376.1 NC_028675_p37 tail tubular protein B phrog_457 tail protein tail 1 25741 28032
YP_009189356.1 NC_028675_p17 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9801 10247
YP_009189374.1 NC_028675_p35 hypothetical protein phrog_7599 unknown function unknown function 1 24688 24981
YP_009189360.1 NC_028675_p21 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 12987 13466
YP_009189342.1 NC_028675_p3 hypothetical protein phrog_4445 unknown function unknown function 1 2473 2706
YP_009189372.1 NC_028675_p33 capsid protein phrog_267 major head protein head and packaging 1 23407 24438
YP_009189344.1 NC_028675_p5 hypothetical protein phrog_6769 unknown function unknown function 1 3637 4035
YP_009189347.1 NC_028675_p8 hypothetical protein phrog_7359 unknown function unknown function 1 4692 5126
YP_009189353.1 NC_028675_p14 hypothetical protein phrog_7038 unknown function unknown function 1 7011 7247
YP_009189362.1 NC_028675_p23 DNA exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 14583 15539
YP_009189384.1 NC_028675_p45 DNA maturase B phrog_38 terminase large subunit head and packaging 1 38794 40731
YP_009189364.1 NC_028675_p25 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 15954 16394
YP_009189378.1 NC_028675_p39 structural protein phrog_2083 internal virion lysozyme motif head and packaging 1 28719 31604
YP_009189363.1 NC_028675_p24 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15520 15957
YP_009189351.1 NC_028675_p12 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 5894 6694
YP_009189365.1 NC_028675_p26 hypothetical protein phrog_221 metallo-phosphoesterase other 1 16398 17333
YP_009189382.1 NC_028675_p43 endolysin phrog_181 endolysin lysis 1 37800 38357
YP_009189354.1 NC_028675_p15 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 7260 8558
YP_009189373.1 NC_028675_p34 hypothetical protein phrog_6633 tail protein tail 1 24491 24676
YP_009189350.1 NC_028675_p11 hypothetical protein phrog_2827 unknown function unknown function 1 5686 5904
YP_009189355.1 NC_028675_p16 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 8555 9541
YP_009189341.1 NC_028675_p2 hypothetical protein phrog_6323 unknown function unknown function 1 2085 2486
YP_009189346.1 NC_028675_p7 hypothetical protein phrog_6421 unknown function unknown function 1 4211 4690
YP_009189385.1 NC_028675_p46 hypothetical protein phrog_6687 unknown function unknown function 1 40822 41025
YP_009189369.1 NC_028675_p30 structural protein phrog_4893 unknown function unknown function 1 20706 20957
YP_009189352.1 NC_028675_p13 hypothetical protein phrog_7630 unknown function unknown function 1 6694 7011
YP_009189377.1 NC_028675_p38 internal virion protein B phrog_6056 internal virion protein head and packaging 1 28032 28706
YP_009189349.1 NC_028675_p10 hypothetical protein phrog_2827 unknown function unknown function 1 5478 5696