| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028675 |
Definition |
Acinetobacter phage phiAB1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus. |
DB of origin |
REFSEQ |
Length |
41526 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
39.08 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009189379.1 | NC_028675_p40 | internal virion core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 31614 | 34712 |
| YP_009189345.1 | NC_028675_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4025 | 4132 |
| YP_009189370.1 | NC_028675_p31 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 20966 | 22522 |
| YP_009189368.1 | NC_028675_p29 | hypothetical protein | phrog_5394 | unknown function | unknown function | 1 | 20512 | 20709 |
| YP_009189340.1 | NC_028675_p1 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 1574 | 2083 |
| YP_009189381.1 | NC_028675_p42 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 37484 | 37813 |
| YP_009189366.1 | NC_028675_p27 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 17333 | 17983 |
| YP_009189357.1 | NC_028675_p18 | DnaQ-like exonuclease domain-like protein | phrog_9556 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 10244 | 11104 |
| YP_009189343.1 | NC_028675_p4 | hypothetical protein | phrog_7131 | unknown function | unknown function | 1 | 2781 | 3377 |
| YP_009189359.1 | NC_028675_p20 | DNA polymerase A domain-like protein | phrog_2573 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 11494 | 12978 |
| YP_009189375.1 | NC_028675_p36 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 25106 | 25732 |
| YP_009189383.1 | NC_028675_p44 | DNA maturase A | phrog_891 | terminase small subunit | head and packaging | 1 | 38476 | 38784 |
| YP_009189358.1 | NC_028675_p19 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11088 | 11525 |
| YP_009189367.1 | NC_028675_p28 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 17992 | 20409 |
| YP_009189348.1 | NC_028675_p9 | hypothetical protein | phrog_7079 | unknown function | unknown function | 1 | 5137 | 5304 |
| YP_009189361.1 | NC_028675_p22 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 13484 | 14374 |
| YP_009189371.1 | NC_028675_p32 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 22531 | 23391 |
| YP_009189380.1 | NC_028675_p41 | tail fiber | phrog_3918 | tail fiber protein | tail | 1 | 34719 | 37367 |
| YP_009189376.1 | NC_028675_p37 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 25741 | 28032 |
| YP_009189356.1 | NC_028675_p17 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9801 | 10247 |
| YP_009189374.1 | NC_028675_p35 | hypothetical protein | phrog_7599 | unknown function | unknown function | 1 | 24688 | 24981 |
| YP_009189360.1 | NC_028675_p21 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12987 | 13466 |
| YP_009189342.1 | NC_028675_p3 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 2473 | 2706 |
| YP_009189372.1 | NC_028675_p33 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 23407 | 24438 |
| YP_009189344.1 | NC_028675_p5 | hypothetical protein | phrog_6769 | unknown function | unknown function | 1 | 3637 | 4035 |
| YP_009189347.1 | NC_028675_p8 | hypothetical protein | phrog_7359 | unknown function | unknown function | 1 | 4692 | 5126 |
| YP_009189353.1 | NC_028675_p14 | hypothetical protein | phrog_7038 | unknown function | unknown function | 1 | 7011 | 7247 |
| YP_009189362.1 | NC_028675_p23 | DNA exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 14583 | 15539 |
| YP_009189384.1 | NC_028675_p45 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 38794 | 40731 |
| YP_009189364.1 | NC_028675_p25 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 15954 | 16394 |
| YP_009189378.1 | NC_028675_p39 | structural protein | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 28719 | 31604 |
| YP_009189363.1 | NC_028675_p24 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15520 | 15957 |
| YP_009189351.1 | NC_028675_p12 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 5894 | 6694 |
| YP_009189365.1 | NC_028675_p26 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 16398 | 17333 |
| YP_009189382.1 | NC_028675_p43 | endolysin | phrog_181 | endolysin | lysis | 1 | 37800 | 38357 |
| YP_009189354.1 | NC_028675_p15 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 7260 | 8558 |
| YP_009189373.1 | NC_028675_p34 | hypothetical protein | phrog_6633 | tail protein | tail | 1 | 24491 | 24676 |
| YP_009189350.1 | NC_028675_p11 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 5686 | 5904 |
| YP_009189355.1 | NC_028675_p16 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 8555 | 9541 |
| YP_009189341.1 | NC_028675_p2 | hypothetical protein | phrog_6323 | unknown function | unknown function | 1 | 2085 | 2486 |
| YP_009189346.1 | NC_028675_p7 | hypothetical protein | phrog_6421 | unknown function | unknown function | 1 | 4211 | 4690 |
| YP_009189385.1 | NC_028675_p46 | hypothetical protein | phrog_6687 | unknown function | unknown function | 1 | 40822 | 41025 |
| YP_009189369.1 | NC_028675_p30 | structural protein | phrog_4893 | unknown function | unknown function | 1 | 20706 | 20957 |
| YP_009189352.1 | NC_028675_p13 | hypothetical protein | phrog_7630 | unknown function | unknown function | 1 | 6694 | 7011 |
| YP_009189377.1 | NC_028675_p38 | internal virion protein B | phrog_6056 | internal virion protein | head and packaging | 1 | 28032 | 28706 |
| YP_009189349.1 | NC_028675_p10 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 5478 | 5696 |