Genomic map of Acinetobacter phage vB_AbaP_PD-AB9 (NC_028679)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028679
Definition
Acinetobacter phage vB_AbaP_PD-AB9, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus.
DB of origin
REFSEQ
Length
40938
Host Name
Acinetobacter baumannii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
39.33
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009189850.1 NC_028679_p27 hypothetical protein phrog_862 unknown function unknown function -1 27042 27932
YP_009189865.1 NC_028679_p42 hypothetical protein phrog_6769 unknown function unknown function -1 36963 37361
YP_009189849.1 NC_028679_p26 DNA exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 25877 26833
YP_009189869.1 NC_028679_p46 hypothetical protein phrog_6323 unknown function unknown function -1 38627 39001
YP_009189852.1 NC_028679_p29 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28438 30738
YP_009189859.1 NC_028679_p36 hypothetical protein phrog_2827 unknown function unknown function -1 35199 35408
YP_009189848.1 NC_028679_p25 homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25459 25896
YP_009189837.1 NC_028679_p14 hypothetical protein phrog_6633 tail protein tail -1 16613 16798
YP_009189840.1 NC_028679_p17 head-tail connector protein phrog_449 head-tail adaptor connector -1 18770 20326
YP_009189825.1 NC_028679_p2 hypothetical protein phrog_8403 DNA binding protein DNA, RNA and nucleotide metabolism -1 672 809
YP_009189862.1 NC_028679_p39 hypothetical protein phrog_7079 unknown function unknown function -1 35791 35958
YP_009189830.1 NC_028679_p7 hypothetical protein phrog_25305 tail fiber protein tail -1 4073 6574
YP_009189832.1 NC_028679_p9 hypothetical protein phrog_2083 internal virion lysozyme motif head and packaging -1 9689 12574
YP_009189857.1 NC_028679_p34 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 33942 34697
YP_009189864.1 NC_028679_p41 hypothetical protein phrog_6421 unknown function unknown function -1 36405 36941
YP_009189863.1 NC_028679_p40 hypothetical protein phrog_7359 unknown function unknown function -1 35969 36403
YP_009189829.1 NC_028679_p6 holin phrog_126 holin/anti-holin lysis -1 3726 4061
YP_009189870.1 NC_028679_p47 hypothetical protein phrog_19151 unknown function unknown function -1 39003 39278
YP_009189854.1 NC_028679_p31 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 32081 33379
YP_009189853.1 NC_028679_p30 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 31041 32084
YP_009189866.1 NC_028679_p43 hypothetical protein phrog_13611 unknown function unknown function -1 37370 37534
YP_009189843.1 NC_028679_p20 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism -1 20885 23302
YP_009189846.1 NC_028679_p23 hypothetical protein phrog_221 metallo-phosphoesterase other -1 24083 25018
YP_009189841.1 NC_028679_p18 structural protein phrog_4893 unknown function unknown function -1 20335 20586
YP_009189839.1 NC_028679_p16 scaffolding protein phrog_1018 head scaffolding protein head and packaging -1 17901 18761
YP_009189868.1 NC_028679_p45 hypothetical protein phrog_4445 unknown function unknown function -1 38293 38643
YP_009189833.1 NC_028679_p10 hypothetical protein phrog_6056 internal virion protein head and packaging -1 12587 13258
YP_009189847.1 NC_028679_p24 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism -1 25022 25462
YP_009189827.1 NC_028679_p4 hypothetical protein phrog_891 terminase small subunit head and packaging -1 2753 3061
YP_009189838.1 NC_028679_p15 capsid protein phrog_267 major head protein head and packaging -1 16854 17885
YP_009189824.1 NC_028679_p1 hypothetical protein singleton unknown function unknown function -1 512 667
YP_009189842.1 NC_028679_p19 hypothetical protein phrog_5394 unknown function unknown function -1 20583 20780
YP_009189867.1 NC_028679_p44 hypothetical protein phrog_7131 unknown function unknown function -1 37622 38218
YP_009189844.1 NC_028679_p21 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 23311 23955
YP_009189826.1 NC_028679_p3 DNA maturase B phrog_38 terminase large subunit head and packaging -1 806 2743
YP_009189835.1 NC_028679_p12 tail tubular protein A phrog_446 tail protein tail -1 15558 16187
YP_009189851.1 NC_028679_p28 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27950 28429
YP_009189836.1 NC_028679_p13 hypothetical protein singleton unknown function unknown function -1 16344 16601
YP_009189828.1 NC_028679_p5 endolysin phrog_181 endolysin lysis -1 3182 3739
YP_009189871.1 NC_028679_p48 hypothetical protein phrog_1448 unknown function unknown function -1 39280 39789
YP_009189831.1 NC_028679_p8 hypothetical protein phrog_342 internal virion protein with endolysin domain head and packaging -1 6581 9679
YP_009189845.1 NC_028679_p22 hypothetical protein phrog_26659 unknown function unknown function -1 23952 24083
YP_009189861.1 NC_028679_p38 hypothetical protein phrog_7955 unknown function unknown function -1 35613 35804
YP_009189834.1 NC_028679_p11 tail tubular protein B phrog_457 tail protein tail -1 13258 15549
YP_009189858.1 NC_028679_p35 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 34727 35176
YP_009189856.1 NC_028679_p33 hypothetical protein phrog_7630 unknown function unknown function -1 33625 33942
YP_009189860.1 NC_028679_p37 hypothetical protein phrog_2827 unknown function unknown function -1 35398 35616
YP_009189855.1 NC_028679_p32 hypothetical protein phrog_7038 unknown function unknown function -1 33392 33625