| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028679 |
Definition |
Acinetobacter phage vB_AbaP_PD-AB9, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus. |
DB of origin |
REFSEQ |
Length |
40938 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
48 |
%GC |
39.33 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009189850.1 | NC_028679_p27 | hypothetical protein | phrog_862 | unknown function | unknown function | -1 | 27042 | 27932 |
| YP_009189865.1 | NC_028679_p42 | hypothetical protein | phrog_6769 | unknown function | unknown function | -1 | 36963 | 37361 |
| YP_009189849.1 | NC_028679_p26 | DNA exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 25877 | 26833 |
| YP_009189869.1 | NC_028679_p46 | hypothetical protein | phrog_6323 | unknown function | unknown function | -1 | 38627 | 39001 |
| YP_009189852.1 | NC_028679_p29 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28438 | 30738 |
| YP_009189859.1 | NC_028679_p36 | hypothetical protein | phrog_2827 | unknown function | unknown function | -1 | 35199 | 35408 |
| YP_009189848.1 | NC_028679_p25 | homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25459 | 25896 |
| YP_009189837.1 | NC_028679_p14 | hypothetical protein | phrog_6633 | tail protein | tail | -1 | 16613 | 16798 |
| YP_009189840.1 | NC_028679_p17 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | -1 | 18770 | 20326 |
| YP_009189825.1 | NC_028679_p2 | hypothetical protein | phrog_8403 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 672 | 809 |
| YP_009189862.1 | NC_028679_p39 | hypothetical protein | phrog_7079 | unknown function | unknown function | -1 | 35791 | 35958 |
| YP_009189830.1 | NC_028679_p7 | hypothetical protein | phrog_25305 | tail fiber protein | tail | -1 | 4073 | 6574 |
| YP_009189832.1 | NC_028679_p9 | hypothetical protein | phrog_2083 | internal virion lysozyme motif | head and packaging | -1 | 9689 | 12574 |
| YP_009189857.1 | NC_028679_p34 | hypothetical protein | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 33942 | 34697 |
| YP_009189864.1 | NC_028679_p41 | hypothetical protein | phrog_6421 | unknown function | unknown function | -1 | 36405 | 36941 |
| YP_009189863.1 | NC_028679_p40 | hypothetical protein | phrog_7359 | unknown function | unknown function | -1 | 35969 | 36403 |
| YP_009189829.1 | NC_028679_p6 | holin | phrog_126 | holin/anti-holin | lysis | -1 | 3726 | 4061 |
| YP_009189870.1 | NC_028679_p47 | hypothetical protein | phrog_19151 | unknown function | unknown function | -1 | 39003 | 39278 |
| YP_009189854.1 | NC_028679_p31 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 32081 | 33379 |
| YP_009189853.1 | NC_028679_p30 | hypothetical protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 31041 | 32084 |
| YP_009189866.1 | NC_028679_p43 | hypothetical protein | phrog_13611 | unknown function | unknown function | -1 | 37370 | 37534 |
| YP_009189843.1 | NC_028679_p20 | DNA-directed RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 20885 | 23302 |
| YP_009189846.1 | NC_028679_p23 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | -1 | 24083 | 25018 |
| YP_009189841.1 | NC_028679_p18 | structural protein | phrog_4893 | unknown function | unknown function | -1 | 20335 | 20586 |
| YP_009189839.1 | NC_028679_p16 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | -1 | 17901 | 18761 |
| YP_009189868.1 | NC_028679_p45 | hypothetical protein | phrog_4445 | unknown function | unknown function | -1 | 38293 | 38643 |
| YP_009189833.1 | NC_028679_p10 | hypothetical protein | phrog_6056 | internal virion protein | head and packaging | -1 | 12587 | 13258 |
| YP_009189847.1 | NC_028679_p24 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 25022 | 25462 |
| YP_009189827.1 | NC_028679_p4 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | -1 | 2753 | 3061 |
| YP_009189838.1 | NC_028679_p15 | capsid protein | phrog_267 | major head protein | head and packaging | -1 | 16854 | 17885 |
| YP_009189824.1 | NC_028679_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 512 | 667 |
| YP_009189842.1 | NC_028679_p19 | hypothetical protein | phrog_5394 | unknown function | unknown function | -1 | 20583 | 20780 |
| YP_009189867.1 | NC_028679_p44 | hypothetical protein | phrog_7131 | unknown function | unknown function | -1 | 37622 | 38218 |
| YP_009189844.1 | NC_028679_p21 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 23311 | 23955 |
| YP_009189826.1 | NC_028679_p3 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | -1 | 806 | 2743 |
| YP_009189835.1 | NC_028679_p12 | tail tubular protein A | phrog_446 | tail protein | tail | -1 | 15558 | 16187 |
| YP_009189851.1 | NC_028679_p28 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27950 | 28429 |
| YP_009189836.1 | NC_028679_p13 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16344 | 16601 |
| YP_009189828.1 | NC_028679_p5 | endolysin | phrog_181 | endolysin | lysis | -1 | 3182 | 3739 |
| YP_009189871.1 | NC_028679_p48 | hypothetical protein | phrog_1448 | unknown function | unknown function | -1 | 39280 | 39789 |
| YP_009189831.1 | NC_028679_p8 | hypothetical protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | -1 | 6581 | 9679 |
| YP_009189845.1 | NC_028679_p22 | hypothetical protein | phrog_26659 | unknown function | unknown function | -1 | 23952 | 24083 |
| YP_009189861.1 | NC_028679_p38 | hypothetical protein | phrog_7955 | unknown function | unknown function | -1 | 35613 | 35804 |
| YP_009189834.1 | NC_028679_p11 | tail tubular protein B | phrog_457 | tail protein | tail | -1 | 13258 | 15549 |
| YP_009189858.1 | NC_028679_p35 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 34727 | 35176 |
| YP_009189856.1 | NC_028679_p33 | hypothetical protein | phrog_7630 | unknown function | unknown function | -1 | 33625 | 33942 |
| YP_009189860.1 | NC_028679_p37 | hypothetical protein | phrog_2827 | unknown function | unknown function | -1 | 35398 | 35616 |
| YP_009189855.1 | NC_028679_p32 | hypothetical protein | phrog_7038 | unknown function | unknown function | -1 | 33392 | 33625 |