Genomic map of Acinetobacter phage vB_AbaP_PD-6A3 (NC_028684)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028684
Definition
Acinetobacter phage vB_AbaP_PD-6A3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus.
DB of origin
REFSEQ
Length
41563
Host Name
Acinetobacter baumannii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
48
%GC
39.47
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009190500.1 NC_028684_p41 hypothetical protein phrog_862 unknown function unknown function 1 34477 35367
YP_009190506.1 NC_028684_p47 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other 1 38454 39098
YP_009190483.1 NC_028684_p24 hypothetical protein phrog_7131 unknown function unknown function 1 24191 24787
YP_009190493.1 NC_028684_p34 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 27712 28467
YP_009190473.1 NC_028684_p14 hypothetical protein phrog_4390 unknown function unknown function 1 16732 17475
YP_009190491.1 NC_028684_p32 hypothetical protein phrog_2827 unknown function unknown function 1 27001 27210
YP_009190481.1 NC_028684_p22 hypothetical protein phrog_6323 unknown function unknown function 1 23410 23784
YP_009190475.1 NC_028684_p16 endolysin phrog_181 endolysin lysis 1 17807 18364
YP_009190476.1 NC_028684_p17 DNA maturase phrog_891 terminase small subunit head and packaging 1 18485 18793
YP_009190466.1 NC_028684_p7 hypothetical protein phrog_7599 unknown function unknown function 1 4252 4545
YP_009190499.1 NC_028684_p40 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 33980 34459
YP_009190501.1 NC_028684_p42 DNA exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 35576 36532
YP_009190486.1 NC_028684_p27 hypothetical protein phrog_6421 unknown function unknown function 1 25468 26004
YP_009190496.1 NC_028684_p37 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 29030 30328
YP_009190470.1 NC_028684_p11 structural protein phrog_2083 internal virion lysozyme motif head and packaging 1 8280 11165
YP_009190498.1 NC_028684_p39 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 31671 33971
YP_009190471.1 NC_028684_p12 internal virion core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 11175 14273
YP_009190469.1 NC_028684_p10 internal virion protein B phrog_6056 internal virion protein head and packaging 1 7596 8267
YP_009190482.1 NC_028684_p23 hypothetical protein phrog_4445 unknown function unknown function 1 23850 24116
YP_009190464.1 NC_028684_p5 capsid protein phrog_267 major head protein head and packaging 1 2968 3999
YP_009190492.1 NC_028684_p33 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 27233 27682
YP_009190503.1 NC_028684_p44 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 36947 37387
YP_009190479.1 NC_028684_p20 hypothetical protein phrog_1448 unknown function unknown function 1 22622 23131
YP_009190463.1 NC_028684_p4 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 2092 2952
YP_009190460.1 NC_028684_p1 hypothetical protein phrog_5394 unknown function unknown function 1 73 270
YP_009190480.1 NC_028684_p21 hypothetical protein phrog_19151 unknown function unknown function 1 23133 23408
YP_009190505.1 NC_028684_p46 hypothetical protein phrog_26659 unknown function unknown function 1 38326 38457
YP_009190472.1 NC_028684_p13 hypothetical protein phrog_4201 tail fiber protein tail 1 14279 16729
YP_009190465.1 NC_028684_p6 hypothetical protein phrog_6633 tail protein tail 1 4055 4240
YP_009190474.1 NC_028684_p15 holin phrog_126 holin/anti-holin lysis 1 17485 17820
YP_009190484.1 NC_028684_p25 hypothetical protein phrog_13611 unknown function unknown function 1 24875 25039
YP_009190485.1 NC_028684_p26 hypothetical protein phrog_6769 unknown function unknown function 1 25048 25446
YP_009190507.1 NC_028684_p48 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 39107 41524
YP_009190478.1 NC_028684_p19 hypothetical protein phrog_6687 unknown function unknown function 1 20831 21034
YP_009190468.1 NC_028684_p9 tail tubular protein B phrog_457 tail protein tail 1 5305 7596
YP_009190488.1 NC_028684_p29 hypothetical protein phrog_7079 unknown function unknown function 1 26451 26618
YP_009190467.1 NC_028684_p8 tail tubular protein A phrog_446 tail protein tail 1 4667 5296
YP_009190494.1 NC_028684_p35 hypothetical protein phrog_7630 unknown function unknown function 1 28467 28784
YP_009190489.1 NC_028684_p30 hypothetical protein phrog_7955 unknown function unknown function 1 26605 26796
YP_009190495.1 NC_028684_p36 hypothetical protein phrog_7038 unknown function unknown function 1 28784 29017
YP_009190490.1 NC_028684_p31 hypothetical protein phrog_2827 unknown function unknown function 1 26793 27011
YP_009190502.1 NC_028684_p43 homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36513 36950
YP_009190497.1 NC_028684_p38 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 30325 31368
YP_009190477.1 NC_028684_p18 DNA maturase B phrog_38 terminase large subunit head and packaging 1 18803 20740
YP_009190462.1 NC_028684_p3 head-tail connector protein phrog_449 head-tail adaptor connector 1 527 2083
YP_009190461.1 NC_028684_p2 structural protein phrog_4893 unknown function unknown function 1 267 518
YP_009190504.1 NC_028684_p45 hypothetical protein phrog_221 metallo-phosphoesterase other 1 37391 38326
YP_009190487.1 NC_028684_p28 hypothetical protein phrog_7359 unknown function unknown function 1 26006 26440