| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028688 |
Definition |
Klebsiella phage vB_Kp1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Przondovirus. |
DB of origin |
REFSEQ |
Length |
40114 |
Host Name |
Klebsiella pneumoniae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
47 |
%GC |
53.28 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009190959.1 | NC_028688_p12 | DNA-directed RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7930 | 10650 |
| YP_009190967.1 | NC_028688_p20 | host RNA polymerase inhibitor | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 13966 | 14130 |
| YP_009190955.1 | NC_028688_p8 | protein kinase | phrog_2568 | ocr-like anti-restriction | moron, auxiliary metabolic gene and host takeover | 1 | 5939 | 6286 |
| YP_009190976.1 | NC_028688_p29 | hypothetical protein | phrog_4023 | unknown function | unknown function | 1 | 18789 | 19166 |
| YP_009190978.1 | NC_028688_p31 | HNS binding protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 21334 | 21621 |
| YP_009190970.1 | NC_028688_p23 | N-acetylmuramoyl-L-alanine amidase | phrog_822 | amidase | lysis | 1 | 15347 | 15802 |
| YP_009190985.1 | NC_028688_p38 | collar protein | phrog_449 | head-tail adaptor | connector | 1 | 23864 | 25471 |
| YP_009190983.1 | NC_028688_p36 | hypothetical protein | phrog_1391 | unknown function | unknown function | 1 | 23357 | 23578 |
| YP_009190950.1 | NC_028688_p3 | DNA packaging protein A | phrog_1351 | terminase small subunit | head and packaging | 1 | 1641 | 1898 |
| YP_009190981.1 | NC_028688_p34 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 22026 | 22931 |
| YP_009190968.1 | NC_028688_p21 | ssDNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 14197 | 14895 |
| YP_009190961.1 | NC_028688_p14 | hypothetical protein | phrog_4383 | unknown function | unknown function | 1 | 11399 | 11575 |
| YP_009190990.1 | NC_028688_p43 | tail fiber protein | phrog_457 | tail protein | tail | 1 | 28699 | 31074 |
| YP_009190957.1 | NC_028688_p10 | hypothetical protein | phrog_12100 | unknown function | unknown function | 1 | 6632 | 6811 |
| YP_009190975.1 | NC_028688_p28 | hypothetical protein | phrog_2254 | unknown function | unknown function | 1 | 18404 | 18715 |
| YP_009190964.1 | NC_028688_p17 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 13186 | 13449 |
| YP_009190949.1 | NC_028688_p2 | class II holin | phrog_920 | holin | lysis | 1 | 1398 | 1607 |
| YP_009190960.1 | NC_028688_p13 | hypothetical protein | phrog_6440 | unknown function | unknown function | 1 | 10749 | 11309 |
| YP_009190969.1 | NC_028688_p22 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 14895 | 15344 |
| YP_009190952.1 | NC_028688_p5 | DNA packaging protein | phrog_38 | terminase large subunit | head and packaging | 1 | 2437 | 4194 |
| YP_009190993.1 | NC_028688_p46 | internal (core) protein | phrog_1339 | internal virion protein | head and packaging | 1 | 32150 | 34405 |
| YP_009190979.1 | NC_028688_p32 | HNS binding protein | phrog_1334 | unknown function | unknown function | 1 | 21618 | 21827 |
| YP_009190977.1 | NC_028688_p30 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 19192 | 21315 |
| YP_009190987.1 | NC_028688_p40 | capsid and scaffold protein | phrog_267 | major head protein | head and packaging | 1 | 26724 | 27761 |
| YP_009190965.1 | NC_028688_p18 | hypothetical protein | phrog_2585 | nucleotide kinase | other | 1 | 13442 | 13888 |
| YP_009190986.1 | NC_028688_p39 | capsid and scaffold protein | phrog_1052 | head assembly | head and packaging | 1 | 25575 | 26531 |
| YP_009190992.1 | NC_028688_p45 | internal (core) protein | phrog_805 | internal virion protein | head and packaging | 1 | 31560 | 32150 |
| YP_009190951.1 | NC_028688_p4 | endopeptidase Rz | phrog_1327 | Rz-like spanin | lysis | 1 | 1995 | 2444 |
| YP_009190980.1 | NC_028688_p33 | hypothetical protein | phrog_2251 | unknown function | unknown function | 1 | 21824 | 22033 |
| YP_009190958.1 | NC_028688_p11 | protein kinase | phrog_2828 | serine-threonine kinase | other | 1 | 6847 | 7860 |
| YP_009190974.1 | NC_028688_p27 | hypothetical protein | phrog_6794 | unknown function | unknown function | 1 | 18209 | 18391 |
| YP_009190954.1 | NC_028688_p7 | hypothetical protein | phrog_20418 | unknown function | unknown function | 1 | 5689 | 5868 |
| YP_009190991.1 | NC_028688_p44 | internal (core) protein | phrog_308 | internal virion protein | head and packaging | 1 | 31147 | 31557 |
| YP_009190973.1 | NC_028688_p26 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 17999 | 18208 |
| YP_009190982.1 | NC_028688_p35 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 23109 | 23354 |
| YP_009190956.1 | NC_028688_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6279 | 6518 |
| YP_009190972.1 | NC_028688_p25 | primase/helicase protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 16401 | 17927 |
| YP_009190971.1 | NC_028688_p24 | hypothetical protein | phrog_13077 | unknown function | unknown function | 1 | 16081 | 16200 |
| YP_009190962.1 | NC_028688_p15 | hypothetical protein | phrog_6515 | dGTPase inhibitor | other | 1 | 11579 | 11836 |
| YP_009190948.1 | NC_028688_p1 | tail fibers protein | singleton | unknown function | unknown function | 1 | 45 | 1388 |
| YP_009190984.1 | NC_028688_p37 | tail assembly protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 23580 | 23840 |
| YP_009190963.1 | NC_028688_p16 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 11940 | 12986 |
| YP_009190966.1 | NC_028688_p19 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 13875 | 14000 |
| YP_009190989.1 | NC_028688_p42 | tail fiber protein | phrog_446 | tail protein | tail | 1 | 28098 | 28676 |
| YP_009190994.1 | NC_028688_p47 | internal (core) protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 34422 | 38387 |
| YP_009190953.1 | NC_028688_p6 | hypothetical protein | phrog_2193 | unknown function | unknown function | 1 | 4439 | 4588 |
| YP_009190988.1 | NC_028688_p41 | hypothetical protein | phrog_7473 | unknown function | unknown function | 1 | 27803 | 28033 |