Genomic map of Arthrobacter phage Decurro (NC_028692)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028692
Definition
Arthrobacter phage Decurro, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Decurrovirus.
DB of origin
REFSEQ
Length
15524
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
26
%GC
60.23
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009191309.1 NC_028692_p16 lysin A peptidase domain phrog_6700 endolysin lysis 1 11607 12053
YP_009191314.1 NC_028692_p21 helix-turn-helix DNA binding domain protein phrog_3 transcriptional repressor transcription regulation -1 13472 13744
YP_009191299.1 NC_028692_p6 portal protein phrog_12 portal protein head and packaging 1 2547 3707
YP_009191317.1 NC_028692_p24 hypothetical protein phrog_10694 unknown function unknown function 1 14739 14954
YP_009191310.1 NC_028692_p17 lysin A amidase domain phrog_4018 amidase lysis 1 12050 12691
YP_009191300.1 NC_028692_p7 capsid maturation protease phrog_2263 major head protein head and packaging 1 3704 5287
YP_009191315.1 NC_028692_p22 MerR-like HTH DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 13881 14087
YP_009191305.1 NC_028692_p12 hypothetical protein phrog_6889 unknown function unknown function 1 6821 7171
YP_009191298.1 NC_028692_p5 hypothetical protein phrog_7332 unknown function unknown function 1 2292 2495
YP_009191294.1 NC_028692_p1 hypothetical protein phrog_9475 unknown function unknown function 1 43 348
YP_009191311.1 NC_028692_p18 hypothetical protein phrog_9284 holin lysis 1 12697 12906
YP_009191313.1 NC_028692_p20 helix-turn-helix DNA binding protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 13221 13475
YP_009352894.1 NC_028692_p26 HNH endonuclease phrog_5718 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15231 15497
YP_009191296.1 NC_028692_p3 hypothetical protein phrog_10836 unknown function unknown function 1 591 806
YP_009191318.1 NC_028692_p25 hypothetical protein phrog_10672 unknown function unknown function 1 14951 15244
YP_009191303.1 NC_028692_p10 major tail protein phrog_4574 major tail protein tail 1 6015 6437
YP_009191308.1 NC_028692_p15 hypothetical protein phrog_10587 unknown function unknown function 1 11095 11610
YP_009191316.1 NC_028692_p23 helix-turn-helix DNA binding domain protein phrog_8540 replication initiation O-like DNA, RNA and nucleotide metabolism 1 14084 14752
YP_009191312.1 NC_028692_p19 hypothetical protein phrog_689 holin lysis 1 12896 13153
YP_009191295.1 NC_028692_p2 hypothetical protein phrog_17346 unknown function unknown function 1 345 560
YP_009191297.1 NC_028692_p4 terminase phrog_9 terminase large subunit head and packaging 1 800 2290
YP_009191304.1 NC_028692_p11 minor tail protein phrog_5 tail completion or Neck1 protein connector 1 6437 6814
YP_009191307.1 NC_028692_p14 minor tail protein phrog_10760 minor tail protein tail 1 9273 11090
YP_009191301.1 NC_028692_p8 head-to-tail connector phrog_5938 head-tail connector protein connector 1 5291 5647
YP_009191306.1 NC_028692_p13 tape measure protein phrog_3981 tail length tape measure protein tail 1 7282 9279
YP_009191302.1 NC_028692_p9 hypothetical protein phrog_6768 unknown function unknown function 1 5652 6008