Genomic map of Propionibacterium phage PA1-14 (NC_028694)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028694
Definition
Propionibacterium phage PA1-14, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus.
DB of origin
REFSEQ
Length
29407
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
53.85
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009191358.1 NC_028694_p13 hypothetical protein phrog_3166 unknown function unknown function 1 8218 8505
YP_009191364.1 NC_028694_p19 tail fiber protein phrog_1806 collagen like minor tail tail 1 14538 15344
YP_009191362.1 NC_028694_p17 hypothetical protein phrog_1910 lectin other 1 13417 14178
YP_009191355.1 NC_028694_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6741 7112
YP_009191359.1 NC_028694_p14 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 8513 11278
YP_009191368.1 NC_028694_p23 hypothetical protein phrog_1729 unknown function unknown function -1 17254 17652
YP_009191353.1 NC_028694_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6100 6447
YP_009191380.1 NC_028694_p35 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24311 24664
YP_009191361.1 NC_028694_p16 hypothetical protein phrog_110 minor tail protein tail 1 12243 13400
YP_009191374.1 NC_028694_p29 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20333 21004
YP_009191384.1 NC_028694_p39 hypothetical protein phrog_7707 unknown function unknown function -1 25858 26118
YP_009191350.1 NC_028694_p5 capsid and scaffold protein phrog_1879 head scaffolding protein head and packaging 1 4078 4638
YP_009191351.1 NC_028694_p6 major capsid protein phrog_10 major head protein head and packaging 1 4645 5592
YP_009191349.1 NC_028694_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3213 3968
YP_009191381.1 NC_028694_p36 hypothetical protein phrog_1937 unknown function unknown function -1 24770 24970
YP_009191385.1 NC_028694_p40 hypothetical protein phrog_919 unknown function unknown function -1 26246 26557
YP_009191354.1 NC_028694_p9 hypothetical protein phrog_387 neck protein connector 1 6454 6744
YP_009191386.1 NC_028694_p41 hypothetical protein phrog_919 unknown function unknown function -1 26594 26902
YP_009191377.1 NC_028694_p32 hypothetical protein phrog_1288 unknown function unknown function -1 22462 22920
YP_009191378.1 NC_028694_p33 hypothetical protein phrog_1890 unknown function unknown function -1 22969 23478
YP_009191390.1 NC_028694_p45 endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29043 29345
YP_009191352.1 NC_028694_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5637 6098
YP_009191347.1 NC_028694_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 373 1884
YP_009191348.1 NC_028694_p3 portal protein phrog_104 portal protein head and packaging 1 1881 3206
YP_009191369.1 NC_028694_p24 hypothetical protein phrog_1947 unknown function unknown function -1 17656 17940
YP_009191372.1 NC_028694_p27 hypothetical protein phrog_5969 unknown function unknown function -1 19454 19699
YP_009191383.1 NC_028694_p38 hypothetical protein phrog_1908 unknown function unknown function -1 25217 25750
YP_009191388.1 NC_028694_p43 hypothetical protein singleton unknown function unknown function 1 27090 27365
YP_009191373.1 NC_028694_p28 hypothetical protein phrog_1881 unknown function unknown function -1 19724 20281
YP_009191367.1 NC_028694_p22 hypothetical protein phrog_2092 unknown function unknown function -1 16737 17285
YP_009191387.1 NC_028694_p42 hypothetical protein singleton unknown function unknown function 1 26892 27077
YP_009191375.1 NC_028694_p30 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21202 21558
YP_009191356.1 NC_028694_p11 major tail protein phrog_117 major tail protein tail 1 7153 7794
YP_009191379.1 NC_028694_p34 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23370 24311
YP_009191346.1 NC_028694_p1 terminase small subunit phrog_1897 terminase small subunit head and packaging 1 32 373
YP_009191389.1 NC_028694_p44 hypothetical protein phrog_7333 unknown function unknown function 1 28864 28995
YP_009191360.1 NC_028694_p15 minor tail protein phrog_106 minor tail protein tail 1 11294 12235
YP_009191363.1 NC_028694_p18 hypothetical protein phrog_1958 minor tail protein tail 1 14281 14538
YP_009191365.1 NC_028694_p20 hypothetical protein phrog_670 endolysin lysis 1 15386 16240
YP_009191370.1 NC_028694_p25 hypothetical protein phrog_1340 unknown function unknown function -1 17955 18275
YP_009191371.1 NC_028694_p26 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18285 19331
YP_009191357.1 NC_028694_p12 hypothetical protein phrog_1927 tail assembly chaperone tail 1 7823 8119
YP_009191382.1 NC_028694_p37 hypothetical protein phrog_1884 unknown function unknown function -1 24967 25194
YP_009191366.1 NC_028694_p21 hypothetical protein phrog_443 holin lysis 1 16253 16654
YP_009191376.1 NC_028694_p31 hypothetical protein phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 21468 22421