Genomic map of Streptococcus phage T12 (NC_028700)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028700
Definition
Streptococcus phage T12, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
37976
Host Name
Streptococcus pyogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
38.1
Number of singletons
8
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009191682.1 NC_028700_p13 hypothetical protein singleton unknown function unknown function 1 5653 5763
YP_009191691.1 NC_028700_p22 endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9822 10262
YP_009191707.1 NC_028700_p38 hypothetical protein singleton unknown function unknown function 1 17865 18140
YP_009191715.1 NC_028700_p46 hypothetical protein phrog_793 head-tail adaptor connector 1 21340 21651
YP_009191704.1 NC_028700_p35 terminase small subunit phrog_2538 terminase small subunit head and packaging 1 14927 15307
YP_009191723.1 NC_028700_p54 minor tail protein phrog_588 tail fiber protein and host specificity tail 1 27019 30459
YP_009191686.1 NC_028700_p17 hypothetical protein phrog_2410 unknown function unknown function 1 7769 8023
YP_009191673.1 NC_028700_p4 cI repressor phrog_4 transcriptional repressor transcription regulation -1 2007 2876
YP_009191716.1 NC_028700_p47 tail protein phrog_5 tail completion or Neck1 protein connector 1 21699 22043
YP_009191702.1 NC_028700_p33 hypothetical protein singleton unknown function unknown function 1 13725 13931
YP_009191717.1 NC_028700_p48 tail protein phrog_176 tail terminator connector 1 22045 22455
YP_009191694.1 NC_028700_p25 hypothetical protein phrog_236 nucleotide kinase other 1 10857 11093
YP_009191696.1 NC_028700_p27 hypothetical protein phrog_13581 unknown function unknown function 1 11545 11880
YP_009191706.1 NC_028700_p37 SPP1 family portal protein phrog_64 portal protein head and packaging 1 16607 17896
YP_009191678.1 NC_028700_p9 Cro repressor phrog_3 transcriptional repressor transcription regulation 1 4688 4927
YP_009191710.1 NC_028700_p41 scaffold protein phrog_172 head scaffolding protein head and packaging 1 19198 19770
YP_009191683.1 NC_028700_p14 replication initiator protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 5763 6524
YP_009191724.1 NC_028700_p55 structural protein phrog_372 tail protein tail 1 30464 32326
YP_009191720.1 NC_028700_p51 hypothetical protein phrog_7423 unknown function unknown function 1 23277 23735
YP_009191692.1 NC_028700_p23 hypothetical protein phrog_1921 unknown function unknown function 1 10259 10615
YP_009191712.1 NC_028700_p43 capsid protein singleton unknown function unknown function 1 20188 20679
YP_009191701.1 NC_028700_p32 hypothetical protein phrog_2397 unknown function unknown function 1 13438 13608
YP_009191674.1 NC_028700_p5 transmembrane protein phrog_2253 unknown function unknown function 1 3189 3347
YP_009191731.1 NC_028700_p62 hypothetical protein phrog_8309 unknown function unknown function 1 34881 35654
YP_009191689.1 NC_028700_p20 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 9194 9613
YP_009191671.1 NC_028700_p2 hypothetical protein singleton unknown function unknown function -1 1293 1418
YP_009191713.1 NC_028700_p44 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 20692 20985
YP_009191730.1 NC_028700_p61 hypothetical protein phrog_10272 unknown function unknown function 1 34304 34870
YP_009191685.1 NC_028700_p16 hypothetical protein phrog_2113 unknown function unknown function 1 7432 7788
YP_009191670.1 NC_028700_p1 site-specific recombinase phrog_1 integrase integration and excision -1 72 1196
YP_009191699.1 NC_028700_p30 hypothetical protein phrog_13885 unknown function unknown function 1 12648 12941
YP_009191695.1 NC_028700_p26 hypothetical protein singleton unknown function unknown function 1 11066 11542
YP_009191693.1 NC_028700_p24 hypothetical protein phrog_4161 unknown function unknown function 1 10612 10857
YP_009191680.1 NC_028700_p11 hypothetical protein phrog_5866 unknown function unknown function 1 5239 5535
YP_009191681.1 NC_028700_p12 hypothetical protein phrog_7329 unknown function unknown function 1 5532 5669
YP_009191697.1 NC_028700_p28 methyltransferase phrog_954 DNA methyltransferase other 1 11883 12368
YP_009191688.1 NC_028700_p19 single-stranded DNA-binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8527 9201
YP_009191709.1 NC_028700_p40 hypothetical protein phrog_903 unknown function unknown function 1 18782 19048
YP_009191672.1 NC_028700_p3 hypothetical protein phrog_17298 unknown function unknown function -1 1460 1972
YP_009191700.1 NC_028700_p31 hypothetical protein phrog_121 unknown function unknown function 1 12938 13441
YP_009191708.1 NC_028700_p39 head morphogenesis protein singleton unknown function unknown function 1 18112 18630
YP_009191729.1 NC_028700_p60 lysin phrog_1309 endolysin lysis 1 33491 34255
YP_009191727.1 NC_028700_p58 hypothetical protein phrog_1009 unknown function unknown function 1 32789 33157
YP_009191676.1 NC_028700_p7 hypothetical protein phrog_4345 unknown function unknown function 1 4030 4239
YP_009191726.1 NC_028700_p57 hypothetical protein phrog_1382 unknown function unknown function 1 32656 32820
YP_009191734.1 NC_028700_p65 exotoxin type A phrog_1753 enterotoxin type A / speL moron, auxiliary metabolic gene and host takeover -1 36667 37422
YP_009191733.1 NC_028700_p64 hypothetical protein phrog_5239 unknown function unknown function 1 35886 36545
YP_009191684.1 NC_028700_p15 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 6511 7293
YP_009191722.1 NC_028700_p53 tail protein phrog_202 distal tail protein Dit tail 1 25534 27018
YP_009191690.1 NC_028700_p21 HTH protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 9619 9822
YP_009191725.1 NC_028700_p56 hypothetical protein phrog_1060 unknown function unknown function 1 32337 32684
YP_009191679.1 NC_028700_p10 hypothetical protein phrog_7873 unknown function unknown function 1 4939 5202
YP_009191705.1 NC_028700_p36 terminase large subunit phrog_2 terminase large subunit head and packaging 1 15297 16571
YP_009191698.1 NC_028700_p29 hypothetical protein phrog_11337 unknown function unknown function 1 12466 12651
YP_009191711.1 NC_028700_p42 capsid protein singleton unknown function unknown function 1 19788 20201
YP_009191714.1 NC_028700_p45 hypothetical protein phrog_132 head-tail adaptor connector 1 20999 21343
YP_009191728.1 NC_028700_p59 holin phrog_608 holin lysis 1 33157 33489
YP_009191687.1 NC_028700_p18 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 8044 8526
YP_009191703.1 NC_028700_p34 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 13883 14320
YP_009191675.1 NC_028700_p6 hypothetical protein phrog_10731 unknown function unknown function -1 3377 3976
YP_009191732.1 NC_028700_p63 hypothetical protein phrog_10259 unknown function unknown function 1 35664 35843
YP_009191721.1 NC_028700_p52 tail tape measure protein phrog_3981 tail length tape measure protein tail 1 23728 25533
YP_009191719.1 NC_028700_p50 hypothetical protein phrog_2115 tail protein tail 1 22987 23304
YP_009191718.1 NC_028700_p49 major tail protein phrog_1407 major tail protein tail 1 22477 22974
YP_009191677.1 NC_028700_p8 hypothetical protein phrog_5126 unknown function unknown function -1 4228 4614