| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028743 |
Definition |
Mannheimia phage vB_MhS_587AP2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
48594 |
Host Name |
Mannheimia haemolytica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
41.28 |
Number of singletons |
5 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009193582.1 | NC_028743_p31 | integrase | phrog_1 | integrase | integration and excision | -1 | 25143 | 26198 |
| YP_009193611.1 | NC_028743_p60 | hypothetical protein | phrog_678 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 1 | 40944 | 41717 |
| YP_009193602.1 | NC_028743_p51 | hypothetical protein | phrog_1090 | unknown function | unknown function | 1 | 37515 | 37787 |
| YP_009193594.1 | NC_028743_p43 | hypothetical protein | phrog_7964 | unknown function | unknown function | -1 | 32896 | 33525 |
| YP_009193578.1 | NC_028743_p27 | host specificity protein J | phrog_31 | central tail fiber J | tail | 1 | 17474 | 23338 |
| YP_009193585.1 | NC_028743_p34 | cytosine-specific DNA methyltransferase | phrog_26324 | DNA methyltransferase | other | -1 | 27007 | 27603 |
| YP_009193605.1 | NC_028743_p54 | hypothetical protein | phrog_12015 | unknown function | unknown function | -1 | 38616 | 39101 |
| YP_009193565.1 | NC_028743_p14 | toxin-antitoxin system antitoxin component HicB | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | -1 | 9015 | 9431 |
| YP_009193569.1 | NC_028743_p18 | hypothetical protein | phrog_13311 | unknown function | unknown function | 1 | 10847 | 11305 |
| YP_009193574.1 | NC_028743_p23 | minor tail protein L | phrog_18 | minor tail protein | tail | 1 | 15161 | 15877 |
| YP_009193615.1 | NC_028743_p64 | hypothetical protein | phrog_11301 | unknown function | unknown function | 1 | 43554 | 43766 |
| YP_009193570.1 | NC_028743_p19 | hypothetical protein | phrog_13701 | unknown function | unknown function | 1 | 11373 | 11768 |
| YP_009193595.1 | NC_028743_p44 | exonuclease | phrog_5715 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 33566 | 34243 |
| YP_009193566.1 | NC_028743_p15 | toxin-antitoxin system toxon component HicA | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 9487 | 9663 |
| YP_009193603.1 | NC_028743_p52 | hypothetical protein | phrog_14969 | unknown function | unknown function | -1 | 37765 | 38034 |
| YP_009193552.1 | NC_028743_p1 | terminase, small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 1 | 525 |
| YP_009193580.1 | NC_028743_p29 | hypothetical protein | phrog_24735 | unknown function | unknown function | 1 | 23781 | 24380 |
| YP_009193622.1 | NC_028743_p71 | hypothetical protein | phrog_18578 | unknown function | unknown function | -1 | 45826 | 46404 |
| YP_009193562.1 | NC_028743_p11 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7744 | 8112 |
| YP_009193572.1 | NC_028743_p21 | minor tail protein M | phrog_14 | minor tail protein | tail | 1 | 14354 | 14683 |
| YP_009193599.1 | NC_028743_p48 | hypothetical protein | phrog_18413 | unknown function | unknown function | -1 | 35979 | 36338 |
| YP_009193556.1 | NC_028743_p5 | hypothetical protein | phrog_760 | unknown function | unknown function | 1 | 3981 | 5351 |
| YP_009193560.1 | NC_028743_p9 | hypothetical protein | phrog_786 | unknown function | unknown function | 1 | 7021 | 7398 |
| YP_009193619.1 | NC_028743_p68 | endodeoxyribonuclease RusA | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 44424 | 44792 |
| YP_009193601.1 | NC_028743_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36943 | 37056 |
| YP_009193612.1 | NC_028743_p61 | replication protein P | phrog_109 | P-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 41717 | 42364 |
| YP_009193573.1 | NC_028743_p22 | minor tail protein L | phrog_2959 | minor tail protein | tail | 1 | 14683 | 15153 |
| YP_009193604.1 | NC_028743_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38496 | 38636 |
| YP_009193579.1 | NC_028743_p28 | hypothetical protein | phrog_24617 | unknown function | unknown function | 1 | 23436 | 23780 |
| YP_009193593.1 | NC_028743_p42 | pyruvate kinase | phrog_9552 | kinase | other | -1 | 32415 | 32867 |
| YP_009193584.1 | NC_028743_p33 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26523 | 27029 |
| YP_009193559.1 | NC_028743_p8 | hypothetical protein | phrog_13988 | unknown function | unknown function | 1 | 6794 | 7018 |
| YP_009193596.1 | NC_028743_p45 | recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 34221 | 35144 |
| YP_009193610.1 | NC_028743_p59 | hypothetical protein | phrog_4973 | unknown function | unknown function | 1 | 40705 | 40947 |
| YP_009193564.1 | NC_028743_p13 | major tail protein | phrog_1407 | major tail protein | tail | 1 | 8493 | 8975 |
| YP_009193628.1 | NC_028743_p77 | hypothetical protein | phrog_8452 | unknown function | unknown function | 1 | 48425 | 48580 |
| YP_009193555.1 | NC_028743_p4 | head morphogenesis protein | phrog_758 | head morphogenesis | head and packaging | 1 | 3056 | 3994 |
| YP_009193621.1 | NC_028743_p70 | hypothetical protein | phrog_3887 | transcriptional regulator | transcription regulation | -1 | 45115 | 45312 |
| YP_009193571.1 | NC_028743_p20 | tail length tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 11900 | 14350 |
| YP_009193614.1 | NC_028743_p63 | hypothetical protein | phrog_319 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 43052 | 43504 |
| YP_009193589.1 | NC_028743_p38 | hypothetical protein | phrog_7561 | unknown function | unknown function | 1 | 31039 | 31227 |
| YP_009193581.1 | NC_028743_p30 | hypothetical protein | phrog_14212 | unknown function | unknown function | 1 | 24496 | 24789 |
| YP_009193586.1 | NC_028743_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27524 | 28843 |
| YP_009193590.1 | NC_028743_p39 | hypothetical protein | phrog_1992 | MazG-like pyrophosphatase | other | -1 | 31231 | 31695 |
| YP_009193597.1 | NC_028743_p46 | hypothetical protein | phrog_17268 | unknown function | unknown function | -1 | 35157 | 35369 |
| YP_009193592.1 | NC_028743_p41 | hypothetical protein | phrog_7704 | unknown function | unknown function | -1 | 31879 | 32370 |
| YP_009193620.1 | NC_028743_p69 | antitermination protein Q | phrog_79 | anti-termination protein Q-like | transcription regulation | 1 | 44782 | 45147 |
| YP_009193563.1 | NC_028743_p12 | hypothetical protein | phrog_782 | unknown function | unknown function | 1 | 8109 | 8489 |
| YP_009193623.1 | NC_028743_p72 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 46514 | 46867 |
| YP_009193616.1 | NC_028743_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43847 | 44044 |
| YP_009193617.1 | NC_028743_p66 | hypothetical protein | phrog_12212 | unknown function | unknown function | 1 | 44028 | 44150 |
| YP_009193558.1 | NC_028743_p7 | hypothetical protein | phrog_771 | virion structural protein | head and packaging | 1 | 5793 | 6782 |
| YP_009193608.1 | NC_028743_p57 | hypothetical protein | phrog_35 | transcriptional repressor | transcription regulation | 1 | 40315 | 40548 |
| YP_009193618.1 | NC_028743_p67 | hypothetical protein | phrog_131 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44143 | 44427 |
| YP_009193626.1 | NC_028743_p75 | lytic protein Rz1 | phrog_456 | Rz-like spanin | lysis | 1 | 47746 | 47970 |
| YP_009193624.1 | NC_028743_p73 | endolysin | phrog_181 | endolysin | lysis | 1 | 46857 | 47450 |
| YP_009193591.1 | NC_028743_p40 | hypothetical protein | phrog_14017 | unknown function | unknown function | -1 | 31679 | 31882 |
| YP_009193606.1 | NC_028743_p55 | hypothetical protein | phrog_4293 | unknown function | unknown function | -1 | 39106 | 39486 |
| YP_009193567.1 | NC_028743_p16 | hypothetical protein | phrog_791 | unknown function | unknown function | 1 | 9765 | 10430 |
| YP_009193587.1 | NC_028743_p36 | hypothetical protein | phrog_6380 | DNA methyltransferase | other | -1 | 28840 | 29745 |
| YP_009193575.1 | NC_028743_p24 | minor tail protein K | phrog_30 | minor tail protein | tail | 1 | 15881 | 16612 |
| YP_009193568.1 | NC_028743_p17 | hypothetical protein | phrog_7561 | unknown function | unknown function | -1 | 10445 | 10714 |
| YP_009193561.1 | NC_028743_p10 | hypothetical protein | phrog_797 | unknown function | unknown function | 1 | 7398 | 7742 |
| YP_009193607.1 | NC_028743_p56 | CI repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 39500 | 40186 |
| YP_009193557.1 | NC_028743_p6 | hypothetical protein | phrog_766 | head decoration | head and packaging | 1 | 5344 | 5778 |
| YP_009193627.1 | NC_028743_p76 | hypothetical protein | phrog_6519 | unknown function | unknown function | 1 | 47971 | 48228 |
| YP_009193553.1 | NC_028743_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 509 | 1729 |
| YP_009193609.1 | NC_028743_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40535 | 40657 |
| YP_009193613.1 | NC_028743_p62 | DNA N-6-adenine-methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 42361 | 42933 |
| YP_009193554.1 | NC_028743_p3 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 1726 | 3102 |
| YP_009193598.1 | NC_028743_p47 | hypothetical protein | phrog_13811 | unknown function | unknown function | -1 | 35503 | 35982 |
| YP_009193577.1 | NC_028743_p26 | tail assembly protein I | phrog_32 | tail assembly protein | tail | 1 | 16881 | 17471 |
| YP_009193576.1 | NC_028743_p25 | hypothetical protein | phrog_13775 | unknown function | unknown function | 1 | 16753 | 16878 |
| YP_009193583.1 | NC_028743_p32 | hypothetical protein | phrog_8896 | excisionase | integration and excision | -1 | 26158 | 26433 |
| YP_009193625.1 | NC_028743_p74 | lytic protein Rz | phrog_214 | Rz-like spanin | lysis | 1 | 47451 | 47801 |
| YP_009193588.1 | NC_028743_p37 | antirepressor | phrog_377 | anti-repressor Ant | transcription regulation | -1 | 29979 | 30635 |
| YP_009193600.1 | NC_028743_p49 | hypothetical protein | phrog_18123 | unknown function | unknown function | -1 | 36335 | 36847 |