Genomic map of Mannheimia phage vB_MhS_587AP2 (NC_028743)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028743
Definition
Mannheimia phage vB_MhS_587AP2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
48594
Host Name
Mannheimia haemolytica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
41.28
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009193582.1 NC_028743_p31 integrase phrog_1 integrase integration and excision -1 25143 26198
YP_009193611.1 NC_028743_p60 hypothetical protein phrog_678 replication initiation O-like DNA, RNA and nucleotide metabolism 1 40944 41717
YP_009193602.1 NC_028743_p51 hypothetical protein phrog_1090 unknown function unknown function 1 37515 37787
YP_009193594.1 NC_028743_p43 hypothetical protein phrog_7964 unknown function unknown function -1 32896 33525
YP_009193578.1 NC_028743_p27 host specificity protein J phrog_31 central tail fiber J tail 1 17474 23338
YP_009193585.1 NC_028743_p34 cytosine-specific DNA methyltransferase phrog_26324 DNA methyltransferase other -1 27007 27603
YP_009193605.1 NC_028743_p54 hypothetical protein phrog_12015 unknown function unknown function -1 38616 39101
YP_009193565.1 NC_028743_p14 toxin-antitoxin system antitoxin component HicB phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 9015 9431
YP_009193569.1 NC_028743_p18 hypothetical protein phrog_13311 unknown function unknown function 1 10847 11305
YP_009193574.1 NC_028743_p23 minor tail protein L phrog_18 minor tail protein tail 1 15161 15877
YP_009193615.1 NC_028743_p64 hypothetical protein phrog_11301 unknown function unknown function 1 43554 43766
YP_009193570.1 NC_028743_p19 hypothetical protein phrog_13701 unknown function unknown function 1 11373 11768
YP_009193595.1 NC_028743_p44 exonuclease phrog_5715 exonuclease DNA, RNA and nucleotide metabolism -1 33566 34243
YP_009193566.1 NC_028743_p15 toxin-antitoxin system toxon component HicA phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 9487 9663
YP_009193603.1 NC_028743_p52 hypothetical protein phrog_14969 unknown function unknown function -1 37765 38034
YP_009193552.1 NC_028743_p1 terminase, small subunit phrog_51 terminase small subunit head and packaging 1 1 525
YP_009193580.1 NC_028743_p29 hypothetical protein phrog_24735 unknown function unknown function 1 23781 24380
YP_009193622.1 NC_028743_p71 hypothetical protein phrog_18578 unknown function unknown function -1 45826 46404
YP_009193562.1 NC_028743_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7744 8112
YP_009193572.1 NC_028743_p21 minor tail protein M phrog_14 minor tail protein tail 1 14354 14683
YP_009193599.1 NC_028743_p48 hypothetical protein phrog_18413 unknown function unknown function -1 35979 36338
YP_009193556.1 NC_028743_p5 hypothetical protein phrog_760 unknown function unknown function 1 3981 5351
YP_009193560.1 NC_028743_p9 hypothetical protein phrog_786 unknown function unknown function 1 7021 7398
YP_009193619.1 NC_028743_p68 endodeoxyribonuclease RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 44424 44792
YP_009193601.1 NC_028743_p50 hypothetical protein singleton unknown function unknown function -1 36943 37056
YP_009193612.1 NC_028743_p61 replication protein P phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 41717 42364
YP_009193573.1 NC_028743_p22 minor tail protein L phrog_2959 minor tail protein tail 1 14683 15153
YP_009193604.1 NC_028743_p53 hypothetical protein singleton unknown function unknown function 1 38496 38636
YP_009193579.1 NC_028743_p28 hypothetical protein phrog_24617 unknown function unknown function 1 23436 23780
YP_009193593.1 NC_028743_p42 pyruvate kinase phrog_9552 kinase other -1 32415 32867
YP_009193584.1 NC_028743_p33 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26523 27029
YP_009193559.1 NC_028743_p8 hypothetical protein phrog_13988 unknown function unknown function 1 6794 7018
YP_009193596.1 NC_028743_p45 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 34221 35144
YP_009193610.1 NC_028743_p59 hypothetical protein phrog_4973 unknown function unknown function 1 40705 40947
YP_009193564.1 NC_028743_p13 major tail protein phrog_1407 major tail protein tail 1 8493 8975
YP_009193628.1 NC_028743_p77 hypothetical protein phrog_8452 unknown function unknown function 1 48425 48580
YP_009193555.1 NC_028743_p4 head morphogenesis protein phrog_758 head morphogenesis head and packaging 1 3056 3994
YP_009193621.1 NC_028743_p70 hypothetical protein phrog_3887 transcriptional regulator transcription regulation -1 45115 45312
YP_009193571.1 NC_028743_p20 tail length tape measure protein phrog_1538 tail length tape measure protein tail 1 11900 14350
YP_009193614.1 NC_028743_p63 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 43052 43504
YP_009193589.1 NC_028743_p38 hypothetical protein phrog_7561 unknown function unknown function 1 31039 31227
YP_009193581.1 NC_028743_p30 hypothetical protein phrog_14212 unknown function unknown function 1 24496 24789
YP_009193586.1 NC_028743_p35 hypothetical protein singleton unknown function unknown function -1 27524 28843
YP_009193590.1 NC_028743_p39 hypothetical protein phrog_1992 MazG-like pyrophosphatase other -1 31231 31695
YP_009193597.1 NC_028743_p46 hypothetical protein phrog_17268 unknown function unknown function -1 35157 35369
YP_009193592.1 NC_028743_p41 hypothetical protein phrog_7704 unknown function unknown function -1 31879 32370
YP_009193620.1 NC_028743_p69 antitermination protein Q phrog_79 anti-termination protein Q-like transcription regulation 1 44782 45147
YP_009193563.1 NC_028743_p12 hypothetical protein phrog_782 unknown function unknown function 1 8109 8489
YP_009193623.1 NC_028743_p72 holin phrog_126 holin/anti-holin lysis 1 46514 46867
YP_009193616.1 NC_028743_p65 hypothetical protein singleton unknown function unknown function 1 43847 44044
YP_009193617.1 NC_028743_p66 hypothetical protein phrog_12212 unknown function unknown function 1 44028 44150
YP_009193558.1 NC_028743_p7 hypothetical protein phrog_771 virion structural protein head and packaging 1 5793 6782
YP_009193608.1 NC_028743_p57 hypothetical protein phrog_35 transcriptional repressor transcription regulation 1 40315 40548
YP_009193618.1 NC_028743_p67 hypothetical protein phrog_131 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44143 44427
YP_009193626.1 NC_028743_p75 lytic protein Rz1 phrog_456 Rz-like spanin lysis 1 47746 47970
YP_009193624.1 NC_028743_p73 endolysin phrog_181 endolysin lysis 1 46857 47450
YP_009193591.1 NC_028743_p40 hypothetical protein phrog_14017 unknown function unknown function -1 31679 31882
YP_009193606.1 NC_028743_p55 hypothetical protein phrog_4293 unknown function unknown function -1 39106 39486
YP_009193567.1 NC_028743_p16 hypothetical protein phrog_791 unknown function unknown function 1 9765 10430
YP_009193587.1 NC_028743_p36 hypothetical protein phrog_6380 DNA methyltransferase other -1 28840 29745
YP_009193575.1 NC_028743_p24 minor tail protein K phrog_30 minor tail protein tail 1 15881 16612
YP_009193568.1 NC_028743_p17 hypothetical protein phrog_7561 unknown function unknown function -1 10445 10714
YP_009193561.1 NC_028743_p10 hypothetical protein phrog_797 unknown function unknown function 1 7398 7742
YP_009193607.1 NC_028743_p56 CI repressor phrog_4 transcriptional repressor transcription regulation -1 39500 40186
YP_009193557.1 NC_028743_p6 hypothetical protein phrog_766 head decoration head and packaging 1 5344 5778
YP_009193627.1 NC_028743_p76 hypothetical protein phrog_6519 unknown function unknown function 1 47971 48228
YP_009193553.1 NC_028743_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 509 1729
YP_009193609.1 NC_028743_p58 hypothetical protein singleton unknown function unknown function 1 40535 40657
YP_009193613.1 NC_028743_p62 DNA N-6-adenine-methyltransferase phrog_111 DNA methyltransferase other 1 42361 42933
YP_009193554.1 NC_028743_p3 portal protein phrog_146 portal protein head and packaging 1 1726 3102
YP_009193598.1 NC_028743_p47 hypothetical protein phrog_13811 unknown function unknown function -1 35503 35982
YP_009193577.1 NC_028743_p26 tail assembly protein I phrog_32 tail assembly protein tail 1 16881 17471
YP_009193576.1 NC_028743_p25 hypothetical protein phrog_13775 unknown function unknown function 1 16753 16878
YP_009193583.1 NC_028743_p32 hypothetical protein phrog_8896 excisionase integration and excision -1 26158 26433
YP_009193625.1 NC_028743_p74 lytic protein Rz phrog_214 Rz-like spanin lysis 1 47451 47801
YP_009193588.1 NC_028743_p37 antirepressor phrog_377 anti-repressor Ant transcription regulation -1 29979 30635
YP_009193600.1 NC_028743_p49 hypothetical protein phrog_18123 unknown function unknown function -1 36335 36847