Genomic map of Paenibacillus phage Harrison (NC_028746)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028746
Definition
Paenibacillus phage Harrison, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Harrisonvirus.
DB of origin
REFSEQ
Length
44249
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
40.15
Number of singletons
22
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009193877.1 NC_028746_p64 hypothetical protein phrog_7370 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36659 36991
YP_009193825.1 NC_028746_p12 hypothetical protein phrog_2115 tail protein tail 1 7289 7660
YP_009193883.1 NC_028746_p70 hypothetical protein singleton unknown function unknown function 1 39336 39512
YP_009193875.1 NC_028746_p62 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 35860 36264
YP_009193814.1 NC_028746_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
YP_009193836.1 NC_028746_p23 transposase phrog_1299 holin lysis 1 16353 16607
YP_009193840.1 NC_028746_p27 hypothetical protein phrog_35861 unknown function unknown function 1 18119 18562
YP_009193844.1 NC_028746_p31 hypothetical protein singleton unknown function unknown function -1 22380 22607
YP_009193849.1 NC_028746_p36 hypothetical protein singleton unknown function unknown function 1 23987 24145
YP_009193873.1 NC_028746_p60 hypothetical protein phrog_2205 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 34681 35229
YP_009193887.1 NC_028746_p74 hypothetical protein phrog_26793 unknown function unknown function 1 40907 41140
YP_009193859.1 NC_028746_p46 helix-turn-helix domain XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 29880 30101
YP_009193829.1 NC_028746_p16 endopeptidase tail protein phrog_538 minor tail protein tail 1 12468 13586
YP_009193879.1 NC_028746_p66 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 37986 38639
YP_009193874.1 NC_028746_p61 single stranded DNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 35232 35870
YP_009193897.1 NC_028746_p84 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43820 44161
YP_009193831.1 NC_028746_p18 hypothetical protein phrog_6220 unknown function unknown function 1 14675 15016
YP_009193872.1 NC_028746_p59 hypothetical protein singleton unknown function unknown function 1 34421 34684
YP_009193870.1 NC_028746_p57 hypothetical protein singleton unknown function unknown function 1 33853 34203
YP_009193838.1 NC_028746_p25 ABC transporter-like protein phrog_37984 unknown function unknown function 1 16794 17762
YP_009193830.1 NC_028746_p17 tail protein phrog_5339 virion structural protein head and packaging 1 13583 14665
YP_009193878.1 NC_028746_p65 primosome phrog_9474 replication initiation protein DNA, RNA and nucleotide metabolism 1 37040 37927
YP_009193843.1 NC_028746_p30 toxin phrog_37443 toxin moron, auxiliary metabolic gene and host takeover 1 19417 22344
YP_009193884.1 NC_028746_p71 hypothetical protein phrog_10273 unknown function unknown function 1 39525 39890
YP_009193816.1 NC_028746_p3 portal protein phrog_12 portal protein head and packaging 1 2066 3319
YP_009193866.1 NC_028746_p53 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 31696 32448
YP_009193890.1 NC_028746_p77 hypothetical protein singleton unknown function unknown function 1 41524 41619
YP_009193896.1 NC_028746_p83 transglycosylase phrog_1315 unknown function unknown function 1 43519 43833
YP_009193820.1 NC_028746_p7 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 5290 5553
YP_009193882.1 NC_028746_p69 endodeoxyribonuclease RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38969 39343
YP_009193834.1 NC_028746_p21 N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 15391 16068
YP_009193828.1 NC_028746_p15 tail protein phrog_33 distal tail protein Dit tail 1 11599 12465
YP_009193857.1 NC_028746_p44 serine recombinase phrog_95 integrase integration and excision -1 27358 29445
YP_009193891.1 NC_028746_p78 ArpU family transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 41641 42084
YP_009193818.1 NC_028746_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5164
YP_009193817.1 NC_028746_p4 Clp protease phrog_94 head maturation protease head and packaging 1 3303 4025
YP_009193822.1 NC_028746_p9 head-tail joining protein phrog_5 tail completion or Neck1 protein connector 1 5867 6259
YP_009193885.1 NC_028746_p72 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 39907 40689
YP_009193819.1 NC_028746_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5142 5297
YP_009193842.1 NC_028746_p29 hypothetical protein singleton unknown function unknown function 1 18776 18871
YP_009193862.1 NC_028746_p49 hypothetical protein phrog_22780 unknown function unknown function 1 30720 30923
YP_009193851.1 NC_028746_p38 hypothetical protein phrog_15604 membrane protein moron, auxiliary metabolic gene and host takeover 1 25131 25799
YP_009193852.1 NC_028746_p39 accessory gene regulator B phrog_10353 unknown function unknown function 1 25792 26307
YP_009193846.1 NC_028746_p33 hypothetical protein phrog_24691 unknown function unknown function -1 23005 23190
YP_009193868.1 NC_028746_p55 hypothetical protein singleton unknown function unknown function 1 33013 33270
YP_009193835.1 NC_028746_p22 hypothetical protein phrog_419 unknown function unknown function 1 16065 16340
YP_009193894.1 NC_028746_p81 toxin HicA phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 43136 43339
YP_009193863.1 NC_028746_p50 hypothetical protein phrog_13601 unknown function unknown function 1 30930 31307
YP_009193853.1 NC_028746_p40 hypothetical protein singleton unknown function unknown function 1 26304 26432
YP_009193881.1 NC_028746_p68 hypothetical protein phrog_3356 transposase integration and excision 1 38758 38976
YP_009193826.1 NC_028746_p13 hypothetical protein phrog_22986 unknown function unknown function 1 7771 7875
YP_009193827.1 NC_028746_p14 tail tape-measure protein phrog_1272 tail length tape measure protein tail 1 7894 11598
YP_009193865.1 NC_028746_p52 hypothetical protein phrog_13275 unknown function unknown function 1 31518 31691
YP_009193833.1 NC_028746_p20 bacteriocin biosynthesis protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 15155 15394
YP_009193869.1 NC_028746_p56 hypothetical protein singleton unknown function unknown function -1 33260 33772
YP_009193841.1 NC_028746_p28 hypothetical protein singleton unknown function unknown function 1 18620 18730
YP_009193893.1 NC_028746_p80 antitoxin HicB phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 42689 43105
YP_009193821.1 NC_028746_p8 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 5550 5870
YP_009193861.1 NC_028746_p48 hypothetical protein phrog_13817 unknown function unknown function 1 30430 30699
YP_009193867.1 NC_028746_p54 hypothetical protein phrog_14421 unknown function unknown function 1 32445 33020
YP_009193845.1 NC_028746_p32 hypothetical protein singleton unknown function unknown function -1 22656 22919
YP_009193856.1 NC_028746_p43 hypothetical protein singleton unknown function unknown function 1 27082 27318
YP_009193876.1 NC_028746_p63 hypothetical protein phrog_15234 unknown function unknown function 1 36273 36662
YP_009193886.1 NC_028746_p73 hypothetical protein phrog_7018 unknown function unknown function 1 40673 40855
YP_009193823.1 NC_028746_p10 prohead protease phrog_78 tail terminator connector 1 6256 6585
YP_009193855.1 NC_028746_p42 hypothetical protein singleton unknown function unknown function 1 26973 27080
YP_009193847.1 NC_028746_p34 hypothetical protein singleton unknown function unknown function -1 23232 23324
YP_009193839.1 NC_028746_p26 hypothetical protein phrog_33512 unknown function unknown function 1 17782 18135
YP_009193892.1 NC_028746_p79 cytoplasmic protein phrog_8256 unknown function unknown function 1 42290 42634
YP_009193864.1 NC_028746_p51 hypothetical protein phrog_10535 unknown function unknown function 1 31304 31534
YP_009193850.1 NC_028746_p37 telomeric repeat-binding factor 2 phrog_806 unknown function unknown function -1 24356 24907
YP_009193848.1 NC_028746_p35 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 23428 23886
YP_009193888.1 NC_028746_p75 hypothetical protein singleton unknown function unknown function 1 41133 41378
YP_009193815.1 NC_028746_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
YP_009193858.1 NC_028746_p45 helix-turn-helix domain XRE family transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 29447 29785
YP_009193860.1 NC_028746_p47 hypothetical protein singleton unknown function unknown function 1 30218 30415
YP_009193880.1 NC_028746_p67 hypothetical protein singleton unknown function unknown function 1 38641 38751
YP_009193895.1 NC_028746_p82 hypothetical protein singleton unknown function unknown function 1 43340 43498
YP_009193837.1 NC_028746_p24 hypothetical protein singleton unknown function unknown function 1 16645 16794
YP_009193824.1 NC_028746_p11 major tail protein phrog_88 major tail protein tail 1 6621 7217
YP_009193889.1 NC_028746_p76 hypothetical protein singleton unknown function unknown function 1 41375 41518
YP_009193854.1 NC_028746_p41 dipeptidyl aminopeptidase/acylaminoacyl-peptidase phrog_15081 peptidase other 1 26439 26795
YP_009193871.1 NC_028746_p58 hypothetical protein singleton unknown function unknown function 1 34181 34321
YP_009193832.1 NC_028746_p19 hypothetical protein phrog_134 unknown function unknown function 1 15013 15174