| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028747 |
Definition |
Mycobacterium phage Brusacoram, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus. |
DB of origin |
REFSEQ |
Length |
47618 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
66.99 |
Number of singletons |
1 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009193899.1 | NC_028747_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 400 | 2076 |
| YP_009193972.1 | NC_028747_p75 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 46164 | 46421 |
| YP_009193971.1 | NC_028747_p74 | hypothetical protein | phrog_18286 | unknown function | unknown function | 1 | 45979 | 46167 |
| YP_009193907.1 | NC_028747_p10 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 7307 | 7630 |
| YP_009193918.1 | NC_028747_p21 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 19038 | 21299 |
| YP_009193945.1 | NC_028747_p48 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 33716 | 34054 |
| YP_009193909.1 | NC_028747_p12 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7899 | 8312 |
| YP_009193903.1 | NC_028747_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5281 | 6225 |
| YP_009193947.1 | NC_028747_p50 | RusA-like DNA endonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35115 | 35618 |
| YP_009193954.1 | NC_028747_p57 | DNA methylase | phrog_8769 | methyltransferase | other | 1 | 38555 | 38758 |
| YP_009193963.1 | NC_028747_p66 | hypothetical protein | phrog_7254 | unknown function | unknown function | 1 | 42737 | 43003 |
| YP_009193912.1 | NC_028747_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9944 | 10862 |
| YP_009193913.1 | NC_028747_p16 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9944 | 10543 |
| YP_009193920.1 | NC_028747_p23 | hypothetical protein | phrog_6374 | unknown function | unknown function | 1 | 22351 | 22500 |
| YP_009193917.1 | NC_028747_p20 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 18144 | 19037 |
| YP_009193973.1 | NC_028747_p76 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 46418 | 46786 |
| YP_009193898.1 | NC_028747_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 42 | 431 |
| YP_009193926.1 | NC_028747_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25480 | 25839 |
| YP_009193942.1 | NC_028747_p45 | RecE-like protein | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31613 | 32539 |
| YP_009193902.1 | NC_028747_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4879 | 5244 |
| YP_009193959.1 | NC_028747_p62 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 40418 | 41080 |
| YP_009193970.1 | NC_028747_p73 | ribbon-helix-helix DNA binding protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 45597 | 45770 |
| YP_009193919.1 | NC_028747_p22 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21299 | 22336 |
| YP_009193923.1 | NC_028747_p26 | lysin A | phrog_6707 | endolysin | lysis | 1 | 23121 | 24050 |
| YP_009193950.1 | NC_028747_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36129 | 36392 |
| YP_009193908.1 | NC_028747_p11 | hypothetical protein | phrog_4307 | unknown function | unknown function | 1 | 7630 | 7899 |
| YP_009193974.1 | NC_028747_p77 | hypothetical protein | phrog_7285 | unknown function | unknown function | 1 | 46773 | 47021 |
| YP_009193936.1 | NC_028747_p39 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 30293 | 30526 |
| YP_009193901.1 | NC_028747_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3538 | 4875 |
| YP_009193960.1 | NC_028747_p63 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 41077 | 41211 |
| YP_009193914.1 | NC_028747_p17 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10876 | 14643 |
| YP_009193944.1 | NC_028747_p47 | hypothetical protein | phrog_11327 | unknown function | unknown function | 1 | 33507 | 33719 |
| YP_009193921.1 | NC_028747_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22517 | 22879 |
| YP_009193904.1 | NC_028747_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6225 | 6575 |
| YP_009193938.1 | NC_028747_p41 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 30795 | 31067 |
| YP_009193935.1 | NC_028747_p38 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 29790 | 30293 |
| YP_009193964.1 | NC_028747_p67 | HTH DNA binding protein | phrog_908 | unknown function | unknown function | 1 | 43000 | 43902 |
| YP_009193975.1 | NC_028747_p78 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47026 | 47409 |
| YP_009193941.1 | NC_028747_p44 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 31368 | 31616 |
| YP_009193915.1 | NC_028747_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14640 | 16385 |
| YP_009193931.1 | NC_028747_p34 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 27932 | 28798 |
| YP_009193948.1 | NC_028747_p51 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 35612 | 35854 |
| YP_009193965.1 | NC_028747_p68 | hypothetical protein | phrog_5855 | unknown function | unknown function | 1 | 44052 | 44552 |
| YP_009193956.1 | NC_028747_p59 | HTH DNA binding protein | phrog_7170 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 39194 | 39865 |
| YP_009193927.1 | NC_028747_p30 | integrase | phrog_1 | integrase | integration and excision | -1 | 25912 | 26805 |
| YP_009193962.1 | NC_028747_p65 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 42210 | 42740 |
| YP_009193946.1 | NC_028747_p49 | FtsK-like protein | phrog_6152 | unknown function | unknown function | 1 | 34051 | 35118 |
| YP_009193949.1 | NC_028747_p52 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 35851 | 36132 |
| YP_009193924.1 | NC_028747_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 24047 | 25213 |
| YP_009193929.1 | NC_028747_p32 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 27469 | 27702 |
| YP_009193922.1 | NC_028747_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22876 | 23049 |
| YP_009193906.1 | NC_028747_p9 | head-to-tail connector complex protein | phrog_6553 | head closure Hc1 | connector | 1 | 6941 | 7291 |
| YP_009193951.1 | NC_028747_p54 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 36385 | 36747 |
| YP_009193934.1 | NC_028747_p37 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 29336 | 29728 |
| YP_009193911.1 | NC_028747_p14 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 8837 | 9835 |
| YP_009193966.1 | NC_028747_p69 | hypothetical protein | phrog_7429 | unknown function | unknown function | 1 | 44628 | 44840 |
| YP_009193939.1 | NC_028747_p42 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 31064 | 31243 |
| YP_009193952.1 | NC_028747_p55 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 36850 | 38346 |
| YP_009193961.1 | NC_028747_p64 | HTH DNA binding protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 41215 | 42213 |
| YP_009193955.1 | NC_028747_p58 | DNA methylase | phrog_2060 | DNA methyltransferase | other | 1 | 38760 | 39197 |
| YP_009193969.1 | NC_028747_p72 | hypothetical protein | phrog_10254 | unknown function | unknown function | 1 | 45397 | 45600 |
| YP_009193967.1 | NC_028747_p70 | hypothetical protein | phrog_2202 | unknown function | unknown function | 1 | 44904 | 45230 |
| YP_009193943.1 | NC_028747_p46 | RecT-like protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32536 | 33510 |
| YP_009193930.1 | NC_028747_p33 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 27699 | 27935 |
| YP_009193932.1 | NC_028747_p35 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 28795 | 29094 |
| YP_009193957.1 | NC_028747_p60 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 39858 | 40004 |
| YP_009193940.1 | NC_028747_p43 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 31240 | 31371 |
| YP_009193905.1 | NC_028747_p8 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6579 | 6941 |
| YP_009193968.1 | NC_028747_p71 | hypothetical protein | phrog_4550 | unknown function | unknown function | 1 | 45227 | 45400 |
| YP_009193953.1 | NC_028747_p56 | hypothetical protein | phrog_7789 | unknown function | unknown function | 1 | 38443 | 38532 |
| YP_009193933.1 | NC_028747_p36 | hypothetical protein | phrog_9041 | unknown function | unknown function | 1 | 29091 | 29339 |
| YP_009193928.1 | NC_028747_p31 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 26939 | 27340 |
| YP_009193910.1 | NC_028747_p13 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 8309 | 8746 |
| YP_009193900.1 | NC_028747_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2093 | 3547 |
| YP_009193916.1 | NC_028747_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16385 | 18121 |
| YP_009193958.1 | NC_028747_p61 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 40001 | 40336 |
| YP_009193925.1 | NC_028747_p28 | hypothetical protein | phrog_443 | holin | lysis | 1 | 25235 | 25483 |
| YP_009193937.1 | NC_028747_p40 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 30523 | 30798 |