| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028758 |
Definition |
Paenibacillus phage HB10c2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus. |
DB of origin |
REFSEQ |
Length |
35644 |
Host Name |
Paenibacillus larvae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
41.84 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009195207.1 | NC_028758_p17 | hypothetical protein | phrog_5339 | virion structural protein | head and packaging | 1 | 12426 | 13499 |
| YP_009195200.1 | NC_028758_p10 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 6309 | 6704 |
| YP_009195228.1 | NC_028758_p38 | hypothetical protein | phrog_14421 | unknown function | unknown function | 1 | 24687 | 25013 |
| YP_009195195.1 | NC_028758_p5 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4031 | 5161 |
| YP_009195236.1 | NC_028758_p46 | BsuMI modification methylase subunit YdiP | phrog_363 | DNA methyltransferase | other | 1 | 29658 | 30710 |
| YP_009195235.1 | NC_028758_p45 | hypothetical protein | phrog_6868 | unknown function | unknown function | 1 | 29342 | 29647 |
| YP_009195213.1 | NC_028758_p23 | hypothetical protein | phrog_24359 | unknown function | unknown function | -1 | 15391 | 15630 |
| YP_009195233.1 | NC_028758_p43 | hypothetical protein | phrog_2514 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 27221 | 28051 |
| YP_009195206.1 | NC_028758_p16 | hypothetical protein | phrog_538 | minor tail protein | tail | 1 | 11302 | 12420 |
| YP_009195201.1 | NC_028758_p11 | major tail protein | phrog_1407 | major tail protein | tail | 1 | 6706 | 7143 |
| YP_009195211.1 | NC_028758_p21 | N-acetylmuramoyl-L-alanine amidase CwlA precursor | phrog_3088 | amidase | lysis | 1 | 14222 | 14896 |
| YP_009195241.1 | NC_028758_p51 | hypothetical protein | phrog_5494 | unknown function | unknown function | 1 | 32423 | 32881 |
| YP_009195223.1 | NC_028758_p33 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 22297 | 22536 |
| YP_009195227.1 | NC_028758_p37 | hypothetical protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 23896 | 24690 |
| YP_009195197.1 | NC_028758_p7 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5314 | 5577 |
| YP_009195226.1 | NC_028758_p36 | hypothetical protein | phrog_9497 | unknown function | unknown function | 1 | 23605 | 23868 |
| YP_009195214.1 | NC_028758_p24 | hypothetical protein | phrog_26129 | unknown function | unknown function | -1 | 15708 | 16502 |
| YP_009195191.1 | NC_028758_p1 | terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 59 | 373 |
| YP_009195230.1 | NC_028758_p40 | recombination protein Bet | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 25210 | 26124 |
| YP_009195217.1 | NC_028758_p27 | hypothetical protein | phrog_19875 | unknown function | unknown function | -1 | 17869 | 18147 |
| YP_009195232.1 | NC_028758_p42 | hypothetical protein | phrog_7503 | unknown function | unknown function | 1 | 26892 | 27206 |
| YP_009195243.1 | NC_028758_p53 | hypothetical protein | phrog_497 | toxin-antitoxin system HicB-like | moron, auxiliary metabolic gene and host takeover | -1 | 33512 | 33934 |
| YP_009195239.1 | NC_028758_p49 | hypothetical protein | phrog_6998 | unknown function | unknown function | 1 | 31495 | 31710 |
| YP_009195203.1 | NC_028758_p13 | hypothetical protein | phrog_7848 | unknown function | unknown function | 1 | 7505 | 7759 |
| YP_009195215.1 | NC_028758_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16664 | 16873 |
| YP_009195222.1 | NC_028758_p32 | hypothetical protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 21528 | 22268 |
| YP_009195202.1 | NC_028758_p12 | hypothetical protein | phrog_7902 | unknown function | unknown function | 1 | 7140 | 7478 |
| YP_009195204.1 | NC_028758_p14 | membrane protein P6 | phrog_58 | tail length tape measure protein | tail | 1 | 7815 | 10451 |
| YP_009195237.1 | NC_028758_p47 | hypothetical protein | phrog_715 | MazG-like pyrophosphatase | other | 1 | 30707 | 31012 |
| YP_009195238.1 | NC_028758_p48 | YopX protein | phrog_98 | unknown function | unknown function | 1 | 31119 | 31502 |
| YP_009195198.1 | NC_028758_p8 | head-tail adaptor | phrog_25 | head closure Hc1 | connector | 1 | 5574 | 5897 |
| YP_009195193.1 | NC_028758_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2111 | 3328 |
| YP_009195221.1 | NC_028758_p31 | hypothetical protein | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 21334 | 21531 |
| YP_009195224.1 | NC_028758_p34 | regulatory protein | phrog_373 | anti-repressor | transcription regulation | 1 | 22533 | 23270 |
| YP_009195246.1 | NC_028758_p56 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35261 | 35599 |
| YP_009195212.1 | NC_028758_p22 | hypothetical protein | phrog_1299 | holin | lysis | 1 | 14906 | 15148 |
| YP_009195192.1 | NC_028758_p2 | terminase-like protein large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 348 | 2078 |
| YP_009195229.1 | NC_028758_p39 | hypothetical protein | phrog_5189 | unknown function | unknown function | 1 | 25010 | 25207 |
| YP_009195210.1 | NC_028758_p20 | bacteriocin UviB precursor | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 13983 | 14225 |
| YP_009195194.1 | NC_028758_p4 | ATP-dependent Clp protease proteolytic subunit | phrog_94 | head maturation protease | head and packaging | 1 | 3318 | 4034 |
| YP_009195240.1 | NC_028758_p50 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 31707 | 32264 |
| YP_009195220.1 | NC_028758_p30 | helix-turn-helix domain protein | phrog_18248 | transcriptional regulator | transcription regulation | -1 | 20276 | 21115 |
| YP_009195205.1 | NC_028758_p15 | tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 10448 | 11299 |
| YP_009195219.1 | NC_028758_p29 | integrase | phrog_1 | integrase | integration and excision | -1 | 19006 | 20229 |
| YP_009195242.1 | NC_028758_p52 | transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 32932 | 33372 |
| YP_009195245.1 | NC_028758_p55 | hypothetical protein | phrog_1315 | unknown function | unknown function | 1 | 34998 | 35264 |
| YP_009195209.1 | NC_028758_p19 | hypothetical protein | phrog_134 | unknown function | unknown function | 1 | 13844 | 14005 |
| YP_009195218.1 | NC_028758_p28 | hypothetical protein | phrog_17477 | anti-repressor | transcription regulation | 1 | 18239 | 18694 |
| YP_009195196.1 | NC_028758_p6 | hypothetical protein | phrog_6793 | unknown function | unknown function | 1 | 5139 | 5321 |
| YP_009195199.1 | NC_028758_p9 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5897 | 6325 |
| YP_009195231.1 | NC_028758_p41 | metallo-hydrolase YycJ | phrog_392 | metal-dependent hydrolase | other | 1 | 26137 | 26895 |
| YP_009195234.1 | NC_028758_p44 | replicative DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 28011 | 29339 |
| YP_009195216.1 | NC_028758_p26 | telomeric repeat-binding factor 2 | phrog_806 | unknown function | unknown function | -1 | 17221 | 17772 |
| YP_009195244.1 | NC_028758_p54 | YcfA-like protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 33996 | 34211 |
| YP_009195225.1 | NC_028758_p35 | hypothetical protein | phrog_12380 | unknown function | unknown function | 1 | 23330 | 23599 |
| YP_009195208.1 | NC_028758_p18 | hypothetical protein | phrog_6220 | unknown function | unknown function | 1 | 13509 | 13844 |