Genomic map of Paenibacillus phage HB10c2 (NC_028758)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028758
Definition
Paenibacillus phage HB10c2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus.
DB of origin
REFSEQ
Length
35644
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
41.84
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009195207.1 NC_028758_p17 hypothetical protein phrog_5339 virion structural protein head and packaging 1 12426 13499
YP_009195200.1 NC_028758_p10 hypothetical protein phrog_176 tail terminator connector 1 6309 6704
YP_009195228.1 NC_028758_p38 hypothetical protein phrog_14421 unknown function unknown function 1 24687 25013
YP_009195195.1 NC_028758_p5 major capsid protein phrog_10 major head protein head and packaging 1 4031 5161
YP_009195236.1 NC_028758_p46 BsuMI modification methylase subunit YdiP phrog_363 DNA methyltransferase other 1 29658 30710
YP_009195235.1 NC_028758_p45 hypothetical protein phrog_6868 unknown function unknown function 1 29342 29647
YP_009195213.1 NC_028758_p23 hypothetical protein phrog_24359 unknown function unknown function -1 15391 15630
YP_009195233.1 NC_028758_p43 hypothetical protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 27221 28051
YP_009195206.1 NC_028758_p16 hypothetical protein phrog_538 minor tail protein tail 1 11302 12420
YP_009195201.1 NC_028758_p11 major tail protein phrog_1407 major tail protein tail 1 6706 7143
YP_009195211.1 NC_028758_p21 N-acetylmuramoyl-L-alanine amidase CwlA precursor phrog_3088 amidase lysis 1 14222 14896
YP_009195241.1 NC_028758_p51 hypothetical protein phrog_5494 unknown function unknown function 1 32423 32881
YP_009195223.1 NC_028758_p33 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 22297 22536
YP_009195227.1 NC_028758_p37 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 23896 24690
YP_009195197.1 NC_028758_p7 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5314 5577
YP_009195226.1 NC_028758_p36 hypothetical protein phrog_9497 unknown function unknown function 1 23605 23868
YP_009195214.1 NC_028758_p24 hypothetical protein phrog_26129 unknown function unknown function -1 15708 16502
YP_009195191.1 NC_028758_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 59 373
YP_009195230.1 NC_028758_p40 recombination protein Bet phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 25210 26124
YP_009195217.1 NC_028758_p27 hypothetical protein phrog_19875 unknown function unknown function -1 17869 18147
YP_009195232.1 NC_028758_p42 hypothetical protein phrog_7503 unknown function unknown function 1 26892 27206
YP_009195243.1 NC_028758_p53 hypothetical protein phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 33512 33934
YP_009195239.1 NC_028758_p49 hypothetical protein phrog_6998 unknown function unknown function 1 31495 31710
YP_009195203.1 NC_028758_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7505 7759
YP_009195215.1 NC_028758_p25 hypothetical protein singleton unknown function unknown function -1 16664 16873
YP_009195222.1 NC_028758_p32 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 21528 22268
YP_009195202.1 NC_028758_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7140 7478
YP_009195204.1 NC_028758_p14 membrane protein P6 phrog_58 tail length tape measure protein tail 1 7815 10451
YP_009195237.1 NC_028758_p47 hypothetical protein phrog_715 MazG-like pyrophosphatase other 1 30707 31012
YP_009195238.1 NC_028758_p48 YopX protein phrog_98 unknown function unknown function 1 31119 31502
YP_009195198.1 NC_028758_p8 head-tail adaptor phrog_25 head closure Hc1 connector 1 5574 5897
YP_009195193.1 NC_028758_p3 portal protein phrog_12 portal protein head and packaging 1 2111 3328
YP_009195221.1 NC_028758_p31 hypothetical protein phrog_1468 transcriptional repressor transcription regulation 1 21334 21531
YP_009195224.1 NC_028758_p34 regulatory protein phrog_373 anti-repressor transcription regulation 1 22533 23270
YP_009195246.1 NC_028758_p56 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 35261 35599
YP_009195212.1 NC_028758_p22 hypothetical protein phrog_1299 holin lysis 1 14906 15148
YP_009195192.1 NC_028758_p2 terminase-like protein large subunit phrog_9 terminase large subunit head and packaging 1 348 2078
YP_009195229.1 NC_028758_p39 hypothetical protein phrog_5189 unknown function unknown function 1 25010 25207
YP_009195210.1 NC_028758_p20 bacteriocin UviB precursor phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13983 14225
YP_009195194.1 NC_028758_p4 ATP-dependent Clp protease proteolytic subunit phrog_94 head maturation protease head and packaging 1 3318 4034
YP_009195240.1 NC_028758_p50 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31707 32264
YP_009195220.1 NC_028758_p30 helix-turn-helix domain protein phrog_18248 transcriptional regulator transcription regulation -1 20276 21115
YP_009195205.1 NC_028758_p15 tail protein phrog_33 distal tail protein Dit tail 1 10448 11299
YP_009195219.1 NC_028758_p29 integrase phrog_1 integrase integration and excision -1 19006 20229
YP_009195242.1 NC_028758_p52 transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 32932 33372
YP_009195245.1 NC_028758_p55 hypothetical protein phrog_1315 unknown function unknown function 1 34998 35264
YP_009195209.1 NC_028758_p19 hypothetical protein phrog_134 unknown function unknown function 1 13844 14005
YP_009195218.1 NC_028758_p28 hypothetical protein phrog_17477 anti-repressor transcription regulation 1 18239 18694
YP_009195196.1 NC_028758_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5139 5321
YP_009195199.1 NC_028758_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5897 6325
YP_009195231.1 NC_028758_p41 metallo-hydrolase YycJ phrog_392 metal-dependent hydrolase other 1 26137 26895
YP_009195234.1 NC_028758_p44 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 28011 29339
YP_009195216.1 NC_028758_p26 telomeric repeat-binding factor 2 phrog_806 unknown function unknown function -1 17221 17772
YP_009195244.1 NC_028758_p54 YcfA-like protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 33996 34211
YP_009195225.1 NC_028758_p35 hypothetical protein phrog_12380 unknown function unknown function 1 23330 23599
YP_009195208.1 NC_028758_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13509 13844