Genomic map of Escherichia phage CAjan (NC_028776)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028776
Definition
Enterobacteria phage CAjan, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus.
DB of origin
REFSEQ
Length
59670
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
44.7
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009196804.1 NC_028776_p10 tail protein phrog_169 tail completion or Neck1 protein connector 1 7848 8255
YP_009196832.1 NC_028776_p38 6-carboxytetrahydropterin synthase phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 30670 31191
YP_009196852.1 NC_028776_p58 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 44011 44667
YP_009196866.1 NC_028776_p72 hypothetical protein phrog_27467 unknown function unknown function 1 53052 53315
YP_009196843.1 NC_028776_p49 nuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 38041 38949
YP_009196813.1 NC_028776_p19 hypothetical protein phrog_12984 lipoprotein other -1 18311 18544
YP_009196811.1 NC_028776_p17 peptidase phrog_2134 unknown function unknown function 1 14720 15154
YP_009196878.1 NC_028776_p84 hypothetical protein phrog_4049 unknown function unknown function 1 56734 57159
YP_009196860.1 NC_028776_p66 hypothetical protein phrog_25978 unknown function unknown function -1 50593 50919
YP_009196848.1 NC_028776_p54 hypothetical protein phrog_22347 unknown function unknown function -1 42284 42514
YP_009196870.1 NC_028776_p76 hypothetical protein phrog_24875 unknown function unknown function 1 54243 54494
YP_009196820.1 NC_028776_p26 hypothetical protein phrog_15669 unknown function unknown function -1 24091 24372
YP_009196865.1 NC_028776_p71 hypothetical protein singleton unknown function unknown function 1 52826 53035
YP_009196844.1 NC_028776_p50 hypothetical protein phrog_13350 unknown function unknown function -1 39015 39902
YP_009196808.1 NC_028776_p14 tail length tape-measure protein phrog_339 tail length tape measure protein tail 1 10457 13573
YP_009196819.1 NC_028776_p25 hypothetical protein phrog_25697 unknown function unknown function 1 23858 24061
YP_009196846.1 NC_028776_p52 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 40696 41610
YP_009196815.1 NC_028776_p21 hypothetical protein phrog_9288 unknown function unknown function 1 21882 22589
YP_009196805.1 NC_028776_p11 structural protein phrog_179 tail terminator connector 1 8255 8704
YP_009196802.1 NC_028776_p8 structural protein phrog_477 head-tail adaptor Ad1 connector 1 6958 7464
YP_009196833.1 NC_028776_p39 hypothetical protein phrog_24659 unknown function unknown function -1 31193 31516
YP_009196827.1 NC_028776_p33 DNA polymerase protein beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 27668 28621
YP_009196824.1 NC_028776_p30 hypothetical protein phrog_23744 unknown function unknown function -1 25041 25334
YP_009196877.1 NC_028776_p83 hypothetical protein phrog_25149 unknown function unknown function 1 56262 56732
YP_009196863.1 NC_028776_p69 hypothetical protein phrog_3199 unknown function unknown function -1 52124 52372
YP_009196884.1 NC_028776_p90 lysis regulatory protein phrog_5975 unknown function unknown function 1 59011 59487
YP_009196829.1 NC_028776_p35 queuosine tRNA-ribosyltransferase phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover -1 28848 29768
YP_009196841.1 NC_028776_p47 hypothetical protein phrog_7864 unknown function unknown function -1 35509 36003
YP_009196850.1 NC_028776_p56 hypothetical protein phrog_2480 unknown function unknown function -1 43359 43817
YP_009196828.1 NC_028776_p34 hypothetical protein phrog_38388 unknown function unknown function -1 28621 28848
YP_009196858.1 NC_028776_p64 hypothetical protein phrog_11967 unknown function unknown function -1 48915 49118
YP_009196879.1 NC_028776_p85 hypothetical protein phrog_22841 unknown function unknown function 1 57222 57407
YP_009196862.1 NC_028776_p68 hypothetical protein phrog_22313 unknown function unknown function -1 51439 52050
YP_009196875.1 NC_028776_p81 hypothetical protein phrog_5321 unknown function unknown function 1 55529 55798
YP_009196871.1 NC_028776_p77 hypothetical protein phrog_27099 unknown function unknown function 1 54485 54763
YP_009196837.1 NC_028776_p43 hypothetical protein phrog_24420 unknown function unknown function -1 33408 33596
YP_009196798.1 NC_028776_p4 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 3699 4571
YP_009196859.1 NC_028776_p65 hypothetical protein phrog_27223 unknown function unknown function -1 49180 49962
YP_009196803.1 NC_028776_p9 structural protein phrog_161 head closure Hc1 connector 1 7468 7848
YP_009196868.1 NC_028776_p74 hypothetical protein phrog_37795 unknown function unknown function 1 53674 53814
YP_009196842.1 NC_028776_p48 helicase-like protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 36063 38039
YP_009196818.1 NC_028776_p24 hypothetical protein phrog_7239 unknown function unknown function 1 23562 23846
YP_009196861.1 NC_028776_p67 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 50970 51452
YP_009196857.1 NC_028776_p63 primase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 46566 48908
YP_009196797.1 NC_028776_p3 portal protein phrog_145 portal protein head and packaging 1 2107 3603
YP_009196807.1 NC_028776_p13 hypothetical protein phrog_569 tail length tape measure protein tail 1 9652 10059
YP_009196849.1 NC_028776_p55 hypothetical protein phrog_27666 unknown function unknown function -1 42526 43317
YP_009196838.1 NC_028776_p44 radical SAM domain-containing protein phrog_26258 radical SAM domain-containing protein other -1 33589 33801
YP_009196816.1 NC_028776_p22 hypothetical protein phrog_9157 unknown function unknown function 1 22661 23029
YP_009196854.1 NC_028776_p60 hypothetical protein phrog_25787 unknown function unknown function -1 45562 45876
YP_009196882.1 NC_028776_p88 hypothetical protein phrog_873 endolysin head and packaging 1 58212 58649
YP_009196836.1 NC_028776_p42 queuosine biosynthesis QueC ATPase phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 32684 33406
YP_009196831.1 NC_028776_p37 GTP cyclohydrolase I type 1 phrog_2197 GTP cyclohydrolase other -1 30043 30633
YP_009196799.1 NC_028776_p5 capsid protein phrog_247 major head protein head and packaging 1 4694 5755
YP_009196885.1 NC_028776_p91 hypothetical protein singleton unknown function unknown function 1 59465 59650
YP_009196835.1 NC_028776_p41 preQ0 transporter phrog_4899 unknown function unknown function -1 32084 32563
YP_009196834.1 NC_028776_p40 hypothetical protein phrog_23361 unknown function unknown function -1 31513 32082
YP_009196826.1 NC_028776_p32 DNA polymerase B phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 25683 27668
YP_009196817.1 NC_028776_p23 hypothetical protein phrog_8329 unknown function unknown function 1 23045 23575
YP_009196822.1 NC_028776_p28 hypothetical protein phrog_12090 unknown function unknown function -1 24568 24759
YP_009196881.1 NC_028776_p87 hypothetical protein phrog_23528 unknown function unknown function 1 57869 58129
YP_009196840.1 NC_028776_p46 transcriptional activator FtrA domain-containing protein phrog_11298 unknown function unknown function -1 34578 35381
YP_009196800.1 NC_028776_p6 structural protein phrog_27336 unknown function unknown function 1 5826 6149
YP_009196853.1 NC_028776_p59 nuclease phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 44677 45144
YP_009196856.1 NC_028776_p62 hypothetical protein phrog_22269 unknown function unknown function 1 46315 46539
YP_009196812.1 NC_028776_p18 tail fiber protein phrog_31 central tail fiber J tail 1 15154 18276
YP_009196810.1 NC_028776_p16 hypothetical protein phrog_2048 tail protein tail 1 14161 14745
YP_009196839.1 NC_028776_p45 queuosine biosynthesis protein phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 33801 34508
YP_009196869.1 NC_028776_p75 hypothetical protein singleton unknown function unknown function 1 53842 54120
YP_009196883.1 NC_028776_p89 holin protein phrog_785 holin lysis 1 58686 59030
YP_009196796.1 NC_028776_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 563 2095
YP_009196851.1 NC_028776_p57 hypothetical protein phrog_17117 unknown function unknown function -1 43833 44003
YP_009196845.1 NC_028776_p51 DNA repair and recombination protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 39902 40630
YP_009196801.1 NC_028776_p7 hypothetical protein phrog_10966 unknown function unknown function 1 6166 6819
YP_009196814.1 NC_028776_p20 tail fiber protein phrog_6578 tail fiber protein tail 1 18627 21710
YP_009196823.1 NC_028776_p29 hypothetical protein phrog_22730 unknown function unknown function -1 24802 25008
YP_009196821.1 NC_028776_p27 hypothetical protein phrog_23919 unknown function unknown function -1 24369 24575
YP_009196809.1 NC_028776_p15 tail protein phrog_1302 distal tail protein tail 1 13577 14161
YP_009196874.1 NC_028776_p80 hypothetical protein singleton unknown function unknown function 1 55341 55532
YP_009196876.1 NC_028776_p82 DNA binding protein phrog_289 GTP-binding domain other 1 55866 56258
YP_009196806.1 NC_028776_p12 tail structural protein phrog_290 minor tail protein tail 1 8719 9642
YP_009196825.1 NC_028776_p31 hypothetical protein phrog_26834 unknown function unknown function -1 25334 25618
YP_009196830.1 NC_028776_p36 hypothetical protein phrog_20065 unknown function unknown function -1 29765 29971
YP_009196873.1 NC_028776_p79 hypothetical protein phrog_8826 unknown function unknown function 1 55114 55338
YP_009196880.1 NC_028776_p86 protease phrog_1040 peptidase HslV family other 1 57404 57868
YP_009196847.1 NC_028776_p53 RNAse H phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 41619 42242
YP_009196864.1 NC_028776_p70 hypothetical protein singleton unknown function unknown function -1 52441 52653
YP_009196855.1 NC_028776_p61 hypothetical protein phrog_36709 unknown function unknown function -1 45876 46073
YP_009196795.1 NC_028776_p1 terminase small subunit phrog_5334 terminase small subunit head and packaging 1 1 558
YP_009196867.1 NC_028776_p73 hypothetical protein phrog_28005 unknown function unknown function 1 53384 53668
YP_009196872.1 NC_028776_p78 hypothetical protein phrog_1972 unknown function unknown function 1 54815 55117