Genomic map of Mycobacterium phage Snenia (NC_028778)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028778
Definition
Mycobacterium phage Snenia, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus.
DB of origin
REFSEQ
Length
75626
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
130
%GC
59.27
Number of singletons
11
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009197108.1 NC_028778_p113 hypothetical protein phrog_3777 unknown function unknown function -1 68059 68439
YP_009197016.1 NC_028778_p21 minor tail protein phrog_746 minor tail protein tail 1 19725 22238
YP_009197045.1 NC_028778_p50 hypothetical protein phrog_2380 unknown function unknown function 1 40073 40318
YP_009197047.1 NC_028778_p52 hypothetical protein phrog_1673 unknown function unknown function 1 40574 40807
YP_009197107.1 NC_028778_p112 hypothetical protein phrog_1909 unknown function unknown function -1 67131 67991
YP_009197071.1 NC_028778_p76 HJ resolvase RusA-like protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53434 53826
YP_009197007.1 NC_028778_p12 hypothetical protein phrog_5775 head-tail connector protein connector 1 8183 8599
YP_009197066.1 NC_028778_p71 hypothetical protein phrog_6206 unknown function unknown function 1 49760 49909
YP_009197012.1 NC_028778_p17 tape measure protein phrog_3547 tail length tape measure protein tail 1 10976 16402
YP_009197118.1 NC_028778_p123 hypothetical protein singleton unknown function unknown function -1 71788 71934
YP_009197106.1 NC_028778_p111 hypothetical protein singleton unknown function unknown function -1 66863 66985
YP_009197046.1 NC_028778_p51 hypothetical protein phrog_1498 unknown function unknown function 1 40419 40577
YP_009197032.1 NC_028778_p37 hypothetical protein phrog_950 unknown function unknown function -1 33188 33979
YP_009197053.1 NC_028778_p58 hypothetical protein phrog_7425 unknown function unknown function 1 43584 43775
YP_009197104.1 NC_028778_p109 hypothetical protein phrog_10592 unknown function unknown function -1 66443 66694
YP_009197018.1 NC_028778_p23 hypothetical protein phrog_240 head protein head and packaging 1 23495 23878
YP_009197000.1 NC_028778_p5 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1190 2755
YP_009197028.1 NC_028778_p33 nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 29648 30388
YP_009197072.1 NC_028778_p77 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 53795 54064
YP_009196998.1 NC_028778_p3 hypothetical protein phrog_18572 unknown function unknown function 1 860 1048
YP_009197057.1 NC_028778_p62 hypothetical protein phrog_7527 unknown function unknown function 1 45821 46117
YP_009197100.1 NC_028778_p105 hypothetical protein phrog_6170 unknown function unknown function 1 65021 65407
YP_009197004.1 NC_028778_p9 major capsid protein phrog_283 major head protein head and packaging 1 6201 7361
YP_009197085.1 NC_028778_p90 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59236 59643
YP_009197003.1 NC_028778_p8 scaffolding protein phrog_3760 head scaffolding protein head and packaging 1 5542 6141
YP_009197080.1 NC_028778_p85 ClP protease phrog_94 head maturation protease head and packaging 1 57328 57978
YP_009197102.1 NC_028778_p107 hypothetical protein phrog_2124 unknown function unknown function -1 65859 65999
YP_009197034.1 NC_028778_p39 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 34656 34955
YP_009197013.1 NC_028778_p18 minor tail protein phrog_106 minor tail protein tail 1 16491 17381
YP_009197030.1 NC_028778_p35 hypothetical protein phrog_17141 unknown function unknown function -1 31009 31392
YP_009197099.1 NC_028778_p104 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 64327 65034
YP_009197122.1 NC_028778_p127 hypothetical protein phrog_26014 unknown function unknown function -1 74146 74469
YP_009197081.1 NC_028778_p86 hypothetical protein phrog_7495 unknown function unknown function 1 57978 58523
YP_009197093.1 NC_028778_p98 hypothetical protein phrog_6027 unknown function unknown function 1 62266 62385
YP_009197098.1 NC_028778_p103 hypothetical protein phrog_28919 unknown function unknown function 1 63876 64130
YP_009197116.1 NC_028778_p121 hypothetical protein phrog_1909 unknown function unknown function -1 70862 71689
YP_009197088.1 NC_028778_p93 DNA-Q exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 60315 61097
YP_009197067.1 NC_028778_p72 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 49891 50754
YP_009197048.1 NC_028778_p53 RNA binding protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 40819 42258
YP_009197075.1 NC_028778_p80 hypothetical protein singleton unknown function unknown function 1 54603 54857
YP_009197070.1 NC_028778_p75 hypothetical protein phrog_6064 unknown function unknown function 1 53251 53433
YP_009197105.1 NC_028778_p110 hypothetical protein phrog_32898 unknown function unknown function -1 66726 66860
YP_009197040.1 NC_028778_p45 hypothetical protein phrog_17914 unknown function unknown function 1 37832 38050
YP_009197031.1 NC_028778_p36 integrase phrog_1 integrase integration and excision 1 31899 33191
YP_009196996.1 NC_028778_p1 hypothetical protein phrog_23622 unknown function unknown function 1 84 473
YP_009197022.1 NC_028778_p27 hypothetical protein phrog_526 holin lysis 1 26435 26851
YP_009197074.1 NC_028778_p79 hypothetical protein phrog_1941 unknown function unknown function 1 54374 54613
YP_009197020.1 NC_028778_p25 hypothetical protein phrog_1087 unknown function unknown function 1 24856 24963
YP_009197103.1 NC_028778_p108 hypothetical protein phrog_18249 unknown function unknown function -1 66003 66437
YP_009197015.1 NC_028778_p20 minor tail protein phrog_4413 minor tail protein tail 1 19276 19725
YP_009197061.1 NC_028778_p66 hypothetical protein phrog_1882 unknown function unknown function 1 47235 47915
YP_009197082.1 NC_028778_p87 hypothetical protein phrog_20980 unknown function unknown function 1 58524 58628
YP_009197029.1 NC_028778_p34 Lsr2 DNA binding protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 30485 30922
YP_009197037.1 NC_028778_p42 hypothetical protein phrog_572 unknown function unknown function 1 35731 36054
YP_009197052.1 NC_028778_p57 hypothetical protein phrog_5858 unknown function unknown function 1 43418 43594
YP_009197114.1 NC_028778_p119 hypothetical protein phrog_6176 unknown function unknown function 1 69875 70330
YP_009197076.1 NC_028778_p81 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 54917 55414
YP_009197111.1 NC_028778_p116 hypothetical protein phrog_6004 unknown function unknown function -1 68964 69248
YP_009197035.1 NC_028778_p40 DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 34952 35167
YP_009197063.1 NC_028778_p68 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 49174 49455
YP_009197087.1 NC_028778_p92 hypothetical protein phrog_4472 nucleotide kinase other 1 59977 60318
YP_009197096.1 NC_028778_p101 hypothetical protein phrog_10290 unknown function unknown function 1 62891 63094
YP_009196999.1 NC_028778_p4 hypothetical protein phrog_17068 unknown function unknown function 1 1041 1190
YP_009197042.1 NC_028778_p47 hypothetical protein phrog_17191 unknown function unknown function 1 38332 38508
YP_009197083.1 NC_028778_p88 hypothetical protein phrog_2218 unknown function unknown function 1 58625 58855
YP_009197041.1 NC_028778_p46 hypothetical protein phrog_6017 unknown function unknown function 1 38040 38354
YP_009197005.1 NC_028778_p10 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 7372 7848
YP_009197113.1 NC_028778_p118 hypothetical protein phrog_6968 unknown function unknown function -1 69402 69602
YP_009197124.1 NC_028778_p129 hypothetical protein singleton unknown function unknown function -1 74613 74726
YP_009197033.1 NC_028778_p38 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 34134 34517
YP_009197051.1 NC_028778_p56 hypothetical protein phrog_17581 unknown function unknown function 1 43288 43440
YP_009197025.1 NC_028778_p30 hypothetical protein phrog_726 unknown function unknown function 1 28375 28794
YP_009197008.1 NC_028778_p13 hypothetical protein phrog_123 tail terminator connector 1 8609 9094
YP_009197050.1 NC_028778_p55 hypothetical protein phrog_5872 unknown function unknown function 1 42974 43291
YP_009197091.1 NC_028778_p96 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61624 62043
YP_009197123.1 NC_028778_p128 hypothetical protein singleton unknown function unknown function 1 74440 74607
YP_009197121.1 NC_028778_p126 hypothetical protein singleton unknown function unknown function -1 73719 74051
YP_009197058.1 NC_028778_p63 hypothetical protein phrog_1389 unknown function unknown function 1 46110 46481
YP_009197026.1 NC_028778_p31 NrdH glutaredoxin protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 28785 29051
YP_009197055.1 NC_028778_p60 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44746 45531
YP_009197059.1 NC_028778_p64 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46468 46800
YP_009197112.1 NC_028778_p117 hypothetical protein phrog_8547 unknown function unknown function -1 69251 69400
YP_009197036.1 NC_028778_p41 hypothetical protein phrog_762 unknown function unknown function 1 35164 35559
YP_009197062.1 NC_028778_p67 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 47912 49177
YP_009197027.1 NC_028778_p32 hypothetical protein phrog_6558 unknown function unknown function -1 29362 29637
YP_009197021.1 NC_028778_p26 lysin A phrog_317 endolysin lysis 1 24963 26435
YP_009197010.1 NC_028778_p15 tail assembly chaperone phrog_4464 tail assembly chaperone tail 1 10125 10400
YP_009197069.1 NC_028778_p74 polynucleotide kinase phrog_505 polynucleotide kinase other 1 52313 53251
YP_009197006.1 NC_028778_p11 hypothetical protein phrog_5309 head-tail adaptor connector 1 7845 8183
YP_009197110.1 NC_028778_p115 hypothetical protein phrog_7390 unknown function unknown function -1 68685 68879
YP_009197077.1 NC_028778_p82 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 55407 55790
YP_009197084.1 NC_028778_p89 hypothetical protein phrog_1969 unknown function unknown function 1 58848 59186
YP_009197117.1 NC_028778_p122 hypothetical protein singleton unknown function unknown function 1 71663 71791
YP_009197073.1 NC_028778_p78 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 54061 54384
YP_009197101.1 NC_028778_p106 hypothetical protein phrog_20848 unknown function unknown function -1 65614 65862
YP_009197019.1 NC_028778_p24 hypothetical protein phrog_3856 minor tail protein tail 1 23890 24831
YP_009197119.1 NC_028778_p124 AAA-ATPase phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 72068 73270
YP_009197109.1 NC_028778_p114 hypothetical protein phrog_6224 unknown function unknown function -1 68480 68710
YP_009197014.1 NC_028778_p19 minor tail protein phrog_110 minor tail protein tail 1 17374 19137
YP_009197092.1 NC_028778_p97 hypothetical protein phrog_3699 unknown function unknown function 1 62043 62273
YP_009197086.1 NC_028778_p91 hypothetical protein phrog_1042 unknown function unknown function 1 59730 59999
YP_009197125.1 NC_028778_p130 hypothetical protein singleton unknown function unknown function 1 75361 75531
YP_009197120.1 NC_028778_p125 hypothetical protein singleton unknown function unknown function -1 73329 73619
YP_009197090.1 NC_028778_p95 hypothetical protein phrog_6439 unknown function unknown function 1 61231 61473
YP_009197009.1 NC_028778_p14 major tail protein phrog_476 major tail protein tail 1 9124 10026
YP_009197078.1 NC_028778_p83 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 55815 56033
YP_009197115.1 NC_028778_p120 hypothetical protein singleton unknown function unknown function -1 70411 70581
YP_009197079.1 NC_028778_p84 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 56030 57328
YP_009197017.1 NC_028778_p22 minor tail protein phrog_416 minor tail protein tail 1 22248 23465
YP_009197049.1 NC_028778_p54 hypothetical protein phrog_301 secreted protein other 1 42640 42981
YP_009196997.1 NC_028778_p2 hypothetical protein phrog_1496 terminase small subunit head and packaging 1 481 852
YP_009197024.1 NC_028778_p29 hypothetical protein phrog_5963 holin lysis 1 27908 28372
YP_009197097.1 NC_028778_p102 hypothetical protein singleton unknown function unknown function 1 63240 63464
YP_009197044.1 NC_028778_p49 hypothetical protein phrog_4870 unknown function unknown function 1 39681 40076
YP_009197023.1 NC_028778_p28 lysin B phrog_102 endolysin lysis 1 26851 27894
YP_009197043.1 NC_028778_p48 membrane protein band-7-like protein phrog_200 lipoprotein other 1 38577 39509
YP_009197060.1 NC_028778_p65 hypothetical protein phrog_2693 unknown function unknown function 1 46781 47242
YP_009197068.1 NC_028778_p73 ribose-phosphate pyrophosphokinase phrog_448 nicotinamide phosphoribosyl transferase other 1 50751 52226
YP_009197065.1 NC_028778_p70 hypothetical protein phrog_18534 unknown function unknown function 1 49609 49767
YP_009197038.1 NC_028778_p43 hypothetical protein phrog_5916 unknown function unknown function 1 36477 36839
YP_009197095.1 NC_028778_p100 hypothetical protein phrog_6800 unknown function unknown function 1 62619 62792
YP_009197089.1 NC_028778_p94 hypothetical protein phrog_397 unknown function unknown function 1 61097 61231
YP_009197094.1 NC_028778_p99 hypothetical protein phrog_14116 unknown function unknown function 1 62369 62626
YP_009197056.1 NC_028778_p61 ERF family ssDNA binding protein phrog_5917 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45531 45803
YP_009197054.1 NC_028778_p59 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 44015 44752
YP_009197039.1 NC_028778_p44 hypothetical protein phrog_1649 metallo-phosphoesterase other 1 37023 37832
YP_009197011.1 NC_028778_p16 tail assembly chaperone phrog_18272 tail assembly chaperone tail 1 10432 10947
YP_009197002.1 NC_028778_p7 hypothetical protein phrog_193 head maturation protease head and packaging 1 4416 5486
YP_009197064.1 NC_028778_p69 hypothetical protein phrog_23047 unknown function unknown function 1 49406 49612
YP_009197001.1 NC_028778_p6 portal protein phrog_104 portal protein head and packaging 1 2756 4399