Genomic map of Mycobacterium phage Tasp14 (NC_028784)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028784
Definition
Mycobacterium phage Tasp14, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
51409
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
89
%GC
63.92
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009197619.1 NC_028784_p40 hypothetical protein phrog_2035 unknown function unknown function -1 31951 32121
YP_009197585.1 NC_028784_p6 hypothetical protein phrog_553 minor tail protein tail 1 3616 4305
YP_009197624.1 NC_028784_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33185 35011
YP_009197639.1 NC_028784_p60 hypothetical protein phrog_397 unknown function unknown function -1 40229 40363
YP_009197584.1 NC_028784_p5 hypothetical protein phrog_1197 tail protein tail 1 2536 3606
YP_009197594.1 NC_028784_p15 major capsid protein phrog_10 major head protein head and packaging 1 11835 12845
YP_009197613.1 NC_028784_p34 hypothetical protein phrog_1560 unknown function unknown function 1 28080 28271
YP_009197652.1 NC_028784_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46225 46737
YP_009197636.1 NC_028784_p57 hypothetical protein phrog_1783 unknown function unknown function -1 39729 39890
YP_009197599.1 NC_028784_p20 head to tail connector phrog_123 tail terminator connector 1 14370 14816
YP_009197582.1 NC_028784_p3 tail protein phrog_226 minor tail protein tail 1 1101 1535
YP_009197651.1 NC_028784_p72 hypothetical protein phrog_1809 unknown function unknown function -1 45788 46183
YP_009197650.1 NC_028784_p71 hypothetical protein phrog_1584 unknown function unknown function -1 45477 45791
YP_009197666.1 NC_028784_p87 hypothetical protein phrog_3574 unknown function unknown function 1 50361 50627
YP_009197611.1 NC_028784_p32 D-ala-D-ala-carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 26179 27657
YP_009197612.1 NC_028784_p33 hypothetical protein phrog_644 unknown function unknown function 1 27747 28070
YP_009197644.1 NC_028784_p65 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42919 43218
YP_009197622.1 NC_028784_p43 hypothetical protein phrog_383 unknown function unknown function -1 32494 32850
YP_009197629.1 NC_028784_p50 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36336 37127
YP_009197647.1 NC_028784_p68 hypothetical protein phrog_520 unknown function unknown function -1 44154 44447
YP_009197591.1 NC_028784_p12 portal protein phrog_104 portal protein head and packaging 1 8935 10377
YP_009197581.1 NC_028784_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 770 1066
YP_009197635.1 NC_028784_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39208 39750
YP_009197646.1 NC_028784_p67 hypothetical protein phrog_1705 unknown function unknown function -1 44011 44157
YP_009197659.1 NC_028784_p80 hypothetical protein phrog_2093 unknown function unknown function -1 48285 48437
YP_009197625.1 NC_028784_p46 hypothetical protein phrog_1781 unknown function unknown function -1 35048 35278
YP_009197589.1 NC_028784_p10 lysin B phrog_102 endolysin lysis 1 6262 7230
YP_009197620.1 NC_028784_p41 hypothetical protein phrog_1860 unknown function unknown function -1 32118 32213
YP_009197667.1 NC_028784_p88 hypothetical protein singleton unknown function unknown function -1 50652 50819
YP_009197663.1 NC_028784_p84 hypothetical protein phrog_2212 unknown function unknown function -1 49447 49566
YP_009197655.1 NC_028784_p76 hypothetical protein phrog_1720 unknown function unknown function -1 47467 47736
YP_009197638.1 NC_028784_p59 hypothetical protein phrog_13342 unknown function unknown function -1 40095 40232
YP_009197649.1 NC_028784_p70 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44660 45484
YP_009197630.1 NC_028784_p51 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37120 37260
YP_009197621.1 NC_028784_p42 hypothetical protein phrog_1971 unknown function unknown function -1 32210 32497
YP_009197618.1 NC_028784_p39 hypothetical protein phrog_2387 nucleotide kinase other -1 31556 31951
YP_009197626.1 NC_028784_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35309 35800
YP_009197641.1 NC_028784_p62 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 41978 42472
YP_009197657.1 NC_028784_p78 hypothetical protein phrog_1155 unknown function unknown function -1 47933 48121
YP_009197656.1 NC_028784_p77 hypothetical protein phrog_1387 unknown function unknown function -1 47733 47936
YP_009197614.1 NC_028784_p35 hypothetical protein phrog_754 minor tail protein tail 1 28268 29101
YP_009197628.1 NC_028784_p49 hypothetical protein phrog_499 unknown function unknown function -1 36157 36339
YP_009197645.1 NC_028784_p66 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 43215 44024
YP_009197610.1 NC_028784_p31 minor tail protein phrog_346 minor tail protein tail 1 24345 26186
YP_009197598.1 NC_028784_p19 head to tail connector phrog_321 tail completion or Neck1 protein connector 1 13971 14366
YP_009197665.1 NC_028784_p86 hypothetical protein phrog_828 unknown function unknown function 1 49921 50127
YP_009197588.1 NC_028784_p9 lysin A phrog_317 endolysin lysis 1 4839 6272
YP_009197661.1 NC_028784_p82 hypothetical protein phrog_5017 unknown function unknown function -1 48867 49232
YP_009197604.1 NC_028784_p25 minor tail protein phrog_106 minor tail protein tail 1 19088 21145
YP_009197633.1 NC_028784_p54 hypothetical protein phrog_1167 phosphofructokinase other -1 38200 38871
YP_009197658.1 NC_028784_p79 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48121 48288
YP_009197605.1 NC_028784_p26 minor tail protein phrog_1543 minor tail protein tail 1 21164 21346
YP_009197637.1 NC_028784_p58 hypothetical protein phrog_11567 unknown function unknown function -1 39890 40066
YP_009197642.1 NC_028784_p63 hypothetical protein phrog_1019 unknown function unknown function -1 42459 42545
YP_009197580.1 NC_028784_p1 hypothetical protein phrog_20581 unknown function unknown function 1 534 773
YP_009197634.1 NC_028784_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38868 39389
YP_009197590.1 NC_028784_p11 terminase phrog_9 terminase large subunit head and packaging 1 7250 8938
YP_009197587.1 NC_028784_p8 hypothetical protein phrog_747 unknown function unknown function 1 4582 4839
YP_009197627.1 NC_028784_p48 hypothetical protein phrog_2094 unknown function unknown function -1 35835 36164
YP_009197623.1 NC_028784_p44 hypothetical protein phrog_3771 unknown function unknown function -1 32850 33188
YP_009197583.1 NC_028784_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1707 2126
YP_009197653.1 NC_028784_p74 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46999 47298
YP_009197592.1 NC_028784_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10374 11255
YP_009197660.1 NC_028784_p81 hypothetical protein phrog_932 unknown function unknown function -1 48434 48610
YP_009197606.1 NC_028784_p27 minor tail protein phrog_110 minor tail protein tail 1 21346 23148
YP_009197607.1 NC_028784_p28 minor tail protein phrog_352 minor tail protein tail 1 23186 23632
YP_009197600.1 NC_028784_p21 major tail protein phrog_117 major tail protein tail 1 14825 15673
YP_009197595.1 NC_028784_p16 head to tail connector phrog_1857 head-tail connector protein connector 1 12924 13160
YP_009197617.1 NC_028784_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31287 31559
YP_009197608.1 NC_028784_p29 minor tail protein phrog_981 minor tail protein tail 1 23629 23976
YP_009197601.1 NC_028784_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15782 16581
YP_009197640.1 NC_028784_p61 DNA methylase phrog_67 DNA methyltransferase other -1 40389 41981
YP_009197668.1 NC_028784_p89 hypothetical protein phrog_15488 unknown function unknown function -1 50884 51351
YP_009197597.1 NC_028784_p18 head to tail connector phrog_320 head closure Hc1 connector 1 13609 13971
YP_009197616.1 NC_028784_p37 integrase phrog_95 integrase integration and excision 1 29595 31166
YP_009197615.1 NC_028784_p36 hypothetical protein phrog_411 unknown function unknown function 1 29221 29517
YP_009197632.1 NC_028784_p53 hypothetical protein phrog_1503 unknown function unknown function -1 38024 38203
YP_009197603.1 NC_028784_p24 tapemeasure phrog_305 tail length tape measure protein tail 1 16593 19064
YP_009197664.1 NC_028784_p85 hypothetical protein phrog_2985 unknown function unknown function 1 49682 49837
YP_009197586.1 NC_028784_p7 hypothetical protein phrog_1718 tail protein tail 1 4314 4574
YP_009197654.1 NC_028784_p75 hypothetical protein phrog_6474 recombination directionality factor integration and excision -1 47291 47470
YP_009197609.1 NC_028784_p30 minor tail protein phrog_1397 unknown function unknown function 1 23973 24320
YP_009197596.1 NC_028784_p17 head to tail connector phrog_137 head-tail adaptor Ad1 connector 1 13160 13609
YP_009197643.1 NC_028784_p64 hypothetical protein phrog_647 unknown function unknown function -1 42542 42922
YP_009197602.1 NC_028784_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15782 16159
YP_009197648.1 NC_028784_p69 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 44451 44633
YP_009197662.1 NC_028784_p83 hypothetical protein phrog_5533 unknown function unknown function -1 49232 49450
YP_009197593.1 NC_028784_p14 scaffold protein phrog_233 head scaffolding protein head and packaging 1 11313 11825
YP_009197631.1 NC_028784_p52 recombination directionality factor phrog_221 metallo-phosphoesterase other -1 37260 38027