| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028785 |
Definition |
Mycobacterium phage NelitzaMV, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
REFSEQ |
Length |
72790 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
139 |
%GC |
63.05 |
Number of singletons |
0 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009197775.1 | NC_028785_p107 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 62446 | 62925 |
| YP_009197778.1 | NC_028785_p110 | hypothetical protein | phrog_97 | UvsX-like recombinase | other | 1 | 63968 | 64930 |
| YP_009197691.1 | NC_028785_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18166 | 19827 |
| YP_009197705.1 | NC_028785_p37 | NrdH-redoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33203 | 33448 |
| YP_009197748.1 | NC_028785_p80 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 50849 | 51037 |
| YP_009197806.1 | NC_028785_p138 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 71998 | 72219 |
| YP_009197767.1 | NC_028785_p99 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 59641 | 59838 |
| YP_009197728.1 | NC_028785_p60 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 42299 | 42406 |
| YP_009197756.1 | NC_028785_p88 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 53942 | 54064 |
| YP_009197795.1 | NC_028785_p127 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 68477 | 68845 |
| YP_009197781.1 | NC_028785_p113 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 65217 | 65429 |
| YP_009197793.1 | NC_028785_p125 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 68155 | 68409 |
| YP_009197682.1 | NC_028785_p14 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 9557 | 9748 |
| YP_009197677.1 | NC_028785_p9 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2174 | 4837 |
| YP_009197745.1 | NC_028785_p77 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 48615 | 49265 |
| YP_009197736.1 | NC_028785_p68 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 45736 | 46047 |
| YP_009197731.1 | NC_028785_p63 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 42998 | 43330 |
| YP_009197771.1 | NC_028785_p103 | HNH homing endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60830 | 61120 |
| YP_009197760.1 | NC_028785_p92 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 56518 | 56676 |
| YP_009197734.1 | NC_028785_p66 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 44618 | 45028 |
| YP_009197689.1 | NC_028785_p21 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 12539 | 13000 |
| YP_009197768.1 | NC_028785_p100 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 59835 | 60191 |
| YP_009197711.1 | NC_028785_p43 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35165 | 35332 |
| YP_009197749.1 | NC_028785_p81 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51034 | 51294 |
| YP_009197678.1 | NC_028785_p10 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4849 | 5070 |
| YP_009197732.1 | NC_028785_p64 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 43327 | 43656 |
| YP_009197801.1 | NC_028785_p133 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 70680 | 70916 |
| YP_009197804.1 | NC_028785_p136 | hypothetical protein | phrog_8479 | unknown function | unknown function | -1 | 71332 | 71496 |
| YP_009197805.1 | NC_028785_p137 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 71561 | 71920 |
| YP_009197730.1 | NC_028785_p62 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 42647 | 42808 |
| YP_009197794.1 | NC_028785_p126 | hypothetical protein | phrog_8201 | unknown function | unknown function | -1 | 68406 | 68480 |
| YP_009197729.1 | NC_028785_p61 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 42414 | 42647 |
| YP_009197769.1 | NC_028785_p101 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 60192 | 60461 |
| YP_009197772.1 | NC_028785_p104 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 61574 | 61798 |
| YP_009197690.1 | NC_028785_p22 | tapemeasure | phrog_2723 | tail length tape measure protein | tail | 1 | 13403 | 18136 |
| YP_009197738.1 | NC_028785_p70 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 46517 | 46885 |
| YP_009197744.1 | NC_028785_p76 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 48382 | 48618 |
| YP_009197754.1 | NC_028785_p86 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 52553 | 53494 |
| YP_009197807.1 | NC_028785_p139 | hypothetical protein | phrog_8627 | unknown function | unknown function | 1 | 72264 | 72677 |
| YP_009197695.1 | NC_028785_p27 | D-Ala-D-Ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24746 | 27592 |
| YP_009197751.1 | NC_028785_p83 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 51483 | 51848 |
| YP_009197707.1 | NC_028785_p39 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 34062 | 34259 |
| YP_009197723.1 | NC_028785_p55 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 40163 | 41008 |
| YP_009197694.1 | NC_028785_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 22353 | 24749 |
| YP_009197800.1 | NC_028785_p132 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 70510 | 70683 |
| YP_009197762.1 | NC_028785_p94 | hypothetical protein | phrog_7833 | unknown function | unknown function | 1 | 57129 | 57251 |
| YP_009197714.1 | NC_028785_p46 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 35792 | 35938 |
| YP_009197735.1 | NC_028785_p67 | ERF-like protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45021 | 45743 |
| YP_009197673.1 | NC_028785_p5 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 783 | 935 |
| YP_009197719.1 | NC_028785_p51 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 38409 | 39182 |
| YP_009197759.1 | NC_028785_p91 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 56241 | 56501 |
| YP_009197669.1 | NC_028785_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| YP_009197688.1 | NC_028785_p20 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 12539 | 13410 |
| YP_009197676.1 | NC_028785_p8 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1827 | 2138 |
| YP_009197706.1 | NC_028785_p38 | Lrs2 | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33628 | 34014 |
| YP_009197743.1 | NC_028785_p75 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48075 | 48392 |
| YP_009197720.1 | NC_028785_p52 | hypothetical protein | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39277 | 39708 |
| YP_009197761.1 | NC_028785_p93 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56673 | 57125 |
| YP_009197701.1 | NC_028785_p33 | holin | phrog_526 | holin | lysis | 1 | 31215 | 31598 |
| YP_009197699.1 | NC_028785_p31 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29351 | 29635 |
| YP_009197698.1 | NC_028785_p30 | HTH DNA binding protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29042 | 29218 |
| YP_009197752.1 | NC_028785_p84 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51845 | 52207 |
| YP_009197687.1 | NC_028785_p19 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 11448 | 12419 |
| YP_009197773.1 | NC_028785_p105 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 61795 | 62058 |
| YP_009197791.1 | NC_028785_p123 | HTH DNA binding protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 67387 | 67650 |
| YP_009197674.1 | NC_028785_p6 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 928 | 1389 |
| YP_009197685.1 | NC_028785_p17 | head-tail connector | phrog_2805 | minor tail protein | tail | 1 | 10659 | 11039 |
| YP_009197770.1 | NC_028785_p102 | HTH DNA binding protein | phrog_1969 | unknown function | unknown function | 1 | 60442 | 60777 |
| YP_009197755.1 | NC_028785_p87 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 53601 | 53969 |
| YP_009197715.1 | NC_028785_p47 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 35938 | 36333 |
| YP_009197802.1 | NC_028785_p134 | hypothetical protein | phrog_7581 | unknown function | unknown function | -1 | 70919 | 71131 |
| YP_009197693.1 | NC_028785_p25 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 21503 | 22336 |
| YP_009197672.1 | NC_028785_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 786 |
| YP_009197785.1 | NC_028785_p117 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 66222 | 66422 |
| YP_009197670.1 | NC_028785_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| YP_009197750.1 | NC_028785_p82 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51269 | 51490 |
| YP_009197742.1 | NC_028785_p74 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 47665 | 48078 |
| YP_009197741.1 | NC_028785_p73 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 47435 | 47668 |
| YP_009197780.1 | NC_028785_p112 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 65051 | 65224 |
| YP_009197757.1 | NC_028785_p89 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54061 | 55386 |
| YP_009197774.1 | NC_028785_p106 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 62069 | 62443 |
| YP_009197777.1 | NC_028785_p109 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 63718 | 63960 |
| YP_009197790.1 | NC_028785_p122 | hypothetical protein | phrog_6448 | unknown function | unknown function | 1 | 67010 | 67123 |
| YP_009197733.1 | NC_028785_p65 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43653 | 44621 |
| YP_009197686.1 | NC_028785_p18 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 11017 | 11421 |
| YP_009197784.1 | NC_028785_p116 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 66071 | 66238 |
| YP_009197697.1 | NC_028785_p29 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28617 | 29045 |
| YP_009197703.1 | NC_028785_p35 | lysin B | phrog_102 | endolysin | lysis | 1 | 31926 | 32783 |
| YP_009197789.1 | NC_028785_p121 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 66847 | 67008 |
| YP_009197679.1 | NC_028785_p11 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 5057 | 6613 |
| YP_009197726.1 | NC_028785_p58 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 41740 | 41928 |
| YP_009197799.1 | NC_028785_p131 | hypothetical protein | phrog_8217 | unknown function | unknown function | -1 | 70194 | 70505 |
| YP_009197787.1 | NC_028785_p119 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 66553 | 66732 |
| YP_009197717.1 | NC_028785_p49 | integrase | phrog_1 | integrase | integration and excision | 1 | 37172 | 38053 |
| YP_009197709.1 | NC_028785_p41 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 34720 | 34995 |
| YP_009197681.1 | NC_028785_p13 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7996 | 9489 |
| YP_009197798.1 | NC_028785_p130 | hypothetical protein | phrog_4006 | unknown function | unknown function | -1 | 69655 | 70173 |
| YP_009197704.1 | NC_028785_p36 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32780 | 33196 |
| YP_009197783.1 | NC_028785_p115 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 65661 | 66074 |
| YP_009197779.1 | NC_028785_p111 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 64927 | 65064 |
| YP_009197740.1 | NC_028785_p72 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47259 | 47432 |
| YP_009197716.1 | NC_028785_p48 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 36619 | 36921 |
| YP_009197753.1 | NC_028785_p85 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 52204 | 52398 |
| YP_009197724.1 | NC_028785_p56 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41010 | 41156 |
| YP_009197737.1 | NC_028785_p69 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 46047 | 46517 |
| YP_009197763.1 | NC_028785_p95 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 57253 | 57588 |
| YP_009197747.1 | NC_028785_p79 | DNAB helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 49590 | 50852 |
| YP_009197722.1 | NC_028785_p54 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 40029 | 40166 |
| YP_009197708.1 | NC_028785_p40 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34256 | 34723 |
| YP_009197696.1 | NC_028785_p28 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 27593 | 28537 |
| YP_009197797.1 | NC_028785_p129 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 69321 | 69650 |
| YP_009197786.1 | NC_028785_p118 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 66419 | 66556 |
| YP_009197746.1 | NC_028785_p78 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49247 | 49597 |
| YP_009197712.1 | NC_028785_p44 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 35329 | 35565 |
| YP_009197675.1 | NC_028785_p7 | hypothetical protein | phrog_2142 | unknown function | unknown function | 1 | 1382 | 1726 |
| YP_009197683.1 | NC_028785_p15 | head-tail connector | phrog_442 | head-tail adaptor | connector | 1 | 9748 | 10314 |
| YP_009197766.1 | NC_028785_p98 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 58860 | 59639 |
| YP_009197718.1 | NC_028785_p50 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38192 | 38431 |
| YP_009197792.1 | NC_028785_p124 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 67647 | 68036 |
| YP_009197680.1 | NC_028785_p12 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 6616 | 7908 |
| YP_009197788.1 | NC_028785_p120 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 66732 | 66863 |
| YP_009197803.1 | NC_028785_p135 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 71128 | 71328 |
| YP_009197764.1 | NC_028785_p96 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 57585 | 58121 |
| YP_009197765.1 | NC_028785_p97 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58304 | 58744 |
| YP_009197782.1 | NC_028785_p114 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 65410 | 65664 |
| YP_009197700.1 | NC_028785_p32 | lysin A | phrog_317 | endolysin | lysis | 1 | 29709 | 31211 |
| YP_009197692.1 | NC_028785_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19899 | 21494 |
| YP_009197710.1 | NC_028785_p42 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 34992 | 35165 |
| YP_009197671.1 | NC_028785_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| YP_009197702.1 | NC_028785_p34 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31591 | 31929 |
| YP_009197758.1 | NC_028785_p90 | HTH DNA binding protein | phrog_1590 | unknown function | unknown function | 1 | 55423 | 56244 |
| YP_009197727.1 | NC_028785_p59 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 41975 | 42280 |
| YP_009197776.1 | NC_028785_p108 | DNA polymerase | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 62936 | 63721 |
| YP_009197721.1 | NC_028785_p53 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 39934 | 40032 |
| YP_009197739.1 | NC_028785_p71 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 46888 | 47259 |
| YP_009197713.1 | NC_028785_p45 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 35558 | 35773 |
| YP_009197796.1 | NC_028785_p128 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 68842 | 69306 |
| YP_009197684.1 | NC_028785_p16 | head-tail connector | phrog_1531 | head closure | connector | 1 | 10327 | 10662 |
| YP_009197725.1 | NC_028785_p57 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41153 | 41431 |