Genomic map of Paenibacillus phage Diva (NC_028788)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028788
Definition
Bacteriophage Diva, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus.
DB of origin
REFSEQ
Length
37246
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
42.07
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009197988.1 NC_028788_p43 RecT-like protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 26813 27715
YP_009198000.1 NC_028788_p55 hypothetical protein phrog_5494 unknown function unknown function 1 34013 34471
YP_009198001.1 NC_028788_p56 ArpU-like transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 34522 34962
YP_009197958.1 NC_028788_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7481 7735
YP_009197955.1 NC_028788_p10 tail protein phrog_176 tail terminator connector 1 6285 6680
YP_009197948.1 NC_028788_p3 portal protein phrog_12 portal protein head and packaging 1 2084 3319
YP_009197991.1 NC_028788_p46 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 28811 29641
YP_009197956.1 NC_028788_p11 major tail protein phrog_1407 major tail protein tail 1 6682 7119
YP_009197986.1 NC_028788_p41 ATPase phrog_1499 unknown function unknown function 1 25094 26626
YP_009197969.1 NC_028788_p24 hypothetical protein phrog_14782 unknown function unknown function 1 15735 15845
YP_009197968.1 NC_028788_p23 hypothetical protein phrog_9393 unknown function unknown function 1 15262 15453
YP_009197950.1 NC_028788_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5152
YP_009197976.1 NC_028788_p31 hypothetical protein phrog_8263 unknown function unknown function -1 19703 20251
YP_009197993.1 NC_028788_p48 hypothetical protein phrog_6868 unknown function unknown function 1 30932 31237
YP_009197964.1 NC_028788_p19 hypothetical protein phrog_134 unknown function unknown function 1 13824 13985
YP_009198005.1 NC_028788_p60 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36854 37192
YP_009197996.1 NC_028788_p51 MazG-like nucleotide pyrophosphohydrolase phrog_715 MazG-like pyrophosphatase other 1 32297 32602
YP_009197995.1 NC_028788_p50 hypothetical protein phrog_1008 DNA methyltransferase other 1 31432 32136
YP_009198004.1 NC_028788_p59 transglycosylase-like protein phrog_1315 unknown function unknown function 1 36591 36857
YP_009197998.1 NC_028788_p53 hypothetical protein phrog_6998 unknown function unknown function 1 33085 33300
YP_009197951.1 NC_028788_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5130 5303
YP_009197984.1 NC_028788_p39 hypothetical protein singleton unknown function unknown function 1 24645 24815
YP_009197999.1 NC_028788_p54 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 33297 33854
YP_009197959.1 NC_028788_p14 tail tape measure phrog_58 tail length tape measure protein tail 1 7795 10431
YP_009197962.1 NC_028788_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12406 13479
YP_009197992.1 NC_028788_p47 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 29607 30929
YP_009197997.1 NC_028788_p52 hypothetical protein phrog_98 unknown function unknown function 1 32709 33092
YP_009197946.1 NC_028788_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
YP_009197972.1 NC_028788_p27 hypothetical protein phrog_17971 unknown function unknown function 1 17240 17380
YP_009197952.1 NC_028788_p7 head-tail connector phrog_40 head-tail adaptor Ad1 connector 1 5296 5559
YP_009197970.1 NC_028788_p25 peptidase-like protein phrog_15561 peptidase other 1 15842 16549
YP_009197961.1 NC_028788_p16 hypothetical protein phrog_538 minor tail protein tail 1 11282 12400
YP_009197965.1 NC_028788_p20 bacteriocin-like protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13966 14205
YP_009197989.1 NC_028788_p44 beta-lactamase-like hydrolase phrog_392 metal-dependent hydrolase other 1 27728 28486
YP_009198003.1 NC_028788_p58 HicA-like protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 35586 35801
YP_009197994.1 NC_028788_p49 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 31248 32300
YP_009197949.1 NC_028788_p4 Clp protease-like protein phrog_94 head maturation protease head and packaging 1 3309 4025
YP_009197973.1 NC_028788_p28 transposase phrog_157 transposase integration and excision -1 17439 18158
YP_009197960.1 NC_028788_p15 tail protein phrog_33 distal tail protein Dit tail 1 10428 11279
YP_009197978.1 NC_028788_p33 transposase-like protein phrog_157 transposase integration and excision -1 20945 21634
YP_009197963.1 NC_028788_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13489 13827
YP_009197947.1 NC_028788_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
YP_009197983.1 NC_028788_p38 DNA binding antirepressor phrog_373 anti-repressor transcription regulation 1 23878 24618
YP_009197953.1 NC_028788_p8 head-tail adaptor phrog_25 head closure Hc1 connector 1 5556 5873
YP_009197990.1 NC_028788_p45 hypothetical protein phrog_7503 unknown function unknown function 1 28483 28797
YP_009197979.1 NC_028788_p34 transposase phrog_151 transposase integration and excision -1 21640 21921
YP_009197967.1 NC_028788_p22 holin-like protein phrog_1299 holin lysis 1 14886 15128
YP_009197954.1 NC_028788_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5873 6301
YP_009197966.1 NC_028788_p21 N-acetylmuramoyl-L-alanine amidase-like protein phrog_3088 amidase lysis 1 14205 14876
YP_009197987.1 NC_028788_p42 hypothetical protein phrog_5189 unknown function unknown function 1 26613 26810
YP_009197981.1 NC_028788_p36 DNA binding protein phrog_925 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 23294 23551
YP_009197975.1 NC_028788_p30 hypothetical protein phrog_3374 unknown function unknown function -1 19498 19701
YP_009197971.1 NC_028788_p26 hypothetical protein phrog_15378 unknown function unknown function 1 16585 17109
YP_009197982.1 NC_028788_p37 hypothetical protein phrog_13096 unknown function unknown function 1 23706 23852
YP_009197985.1 NC_028788_p40 hypothetical protein phrog_8288 unknown function unknown function 1 24820 25110
YP_009198002.1 NC_028788_p57 HicB-like protein phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 35102 35524
YP_009197977.1 NC_028788_p32 YolD-like protein phrog_8703 unknown function unknown function 1 20493 20747
YP_009197974.1 NC_028788_p29 transposase phrog_151 transposase integration and excision -1 18329 19012
YP_009197980.1 NC_028788_p35 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 22631 23077
YP_009197957.1 NC_028788_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7116 7454