| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028789 |
Definition |
Bacillus phage VMY22, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
18609 |
Host Name |
Bacillus cereus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
25 |
%GC |
36.36 |
Number of singletons |
5 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009198019.1 | NC_028789_p14 | tail fibers protein | phrog_2248 | tail protein | tail | 1 | 8160 | 9920 |
| YP_009198020.1 | NC_028789_p15 | upper collar protein | phrog_2038 | upper collar connector | connector | 1 | 9921 | 10847 |
| YP_009198007.1 | NC_028789_p2 | hypothetical protein | phrog_8978 | unknown function | unknown function | -1 | 761 | 982 |
| YP_009198021.1 | NC_028789_p16 | lower collar protein | phrog_3225 | adaptor Ad4 | connector | 1 | 10819 | 11850 |
| YP_009198023.1 | NC_028789_p18 | morphogenesis protein | phrog_9066 | endolysin | lysis | 1 | 13507 | 14709 |
| YP_009198015.1 | NC_028789_p10 | single stranded DNA-binding protein | phrog_6243 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 5190 | 5714 |
| YP_009198022.1 | NC_028789_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11864 | 13507 |
| YP_009198013.1 | NC_028789_p8 | essential replication protein | phrog_6358 | DNA terminal protein | DNA, RNA and nucleotide metabolism | -1 | 4124 | 4810 |
| YP_009198016.1 | NC_028789_p11 | hypothetical protein | phrog_6370 | dsDNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 5912 | 6205 |
| YP_009198029.1 | NC_028789_p24 | hypothetical protein | phrog_6682 | GP16.7-like replication protein | DNA, RNA and nucleotide metabolism | -1 | 17347 | 17721 |
| YP_009198006.1 | NC_028789_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 258 | 761 |
| YP_009198030.1 | NC_028789_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 17721 | 18479 |
| YP_009198024.1 | NC_028789_p19 | bacteriocin biosynthesis protein | phrog_2429 | involved in bacteriocin production or immunity | moron, auxiliary metabolic gene and host takeover | 1 | 14700 | 14942 |
| YP_009198011.1 | NC_028789_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2056 | 2223 |
| YP_009198014.1 | NC_028789_p9 | transcriptional regulator | phrog_10365 | late transcriptional activator | transcription regulation | -1 | 4807 | 5190 |
| YP_009198008.1 | NC_028789_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 982 | 1326 |
| YP_009198017.1 | NC_028789_p12 | capsid and scaffold protein | phrog_10439 | head scaffolding protein | head and packaging | 1 | 6493 | 6792 |
| YP_009198025.1 | NC_028789_p20 | endolysin | phrog_7 | endolysin | lysis | 1 | 14942 | 15679 |
| YP_009198010.1 | NC_028789_p5 | hypothetical protein | phrog_8992 | unknown function | unknown function | -1 | 1500 | 2084 |
| YP_009198027.1 | NC_028789_p22 | hypothetical protein | phrog_27104 | unknown function | unknown function | -1 | 16707 | 16979 |
| YP_009198026.1 | NC_028789_p21 | DNA packaging ATPase | phrog_2150 | terminase | head and packaging | 1 | 15697 | 16695 |
| YP_009198012.1 | NC_028789_p7 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 2320 | 4098 |
| YP_009198009.1 | NC_028789_p4 | hypothetical protein | phrog_13823 | unknown function | unknown function | -1 | 1328 | 1498 |
| YP_009198028.1 | NC_028789_p23 | hypothetical protein | phrog_26935 | unknown function | unknown function | -1 | 16995 | 17159 |
| YP_009198018.1 | NC_028789_p13 | major capsid protein | phrog_2006 | major head protein | head and packaging | 1 | 6792 | 8141 |