Genomic map of Bacillus phage VMY22 (NC_028789)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028789
Definition
Bacillus phage VMY22, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
18609
Host Name
Bacillus cereus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
25
%GC
36.36
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009198019.1 NC_028789_p14 tail fibers protein phrog_2248 tail protein tail 1 8160 9920
YP_009198020.1 NC_028789_p15 upper collar protein phrog_2038 upper collar connector connector 1 9921 10847
YP_009198007.1 NC_028789_p2 hypothetical protein phrog_8978 unknown function unknown function -1 761 982
YP_009198021.1 NC_028789_p16 lower collar protein phrog_3225 adaptor Ad4 connector 1 10819 11850
YP_009198023.1 NC_028789_p18 morphogenesis protein phrog_9066 endolysin lysis 1 13507 14709
YP_009198015.1 NC_028789_p10 single stranded DNA-binding protein phrog_6243 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 5190 5714
YP_009198022.1 NC_028789_p17 hypothetical protein singleton unknown function unknown function 1 11864 13507
YP_009198013.1 NC_028789_p8 essential replication protein phrog_6358 DNA terminal protein DNA, RNA and nucleotide metabolism -1 4124 4810
YP_009198016.1 NC_028789_p11 hypothetical protein phrog_6370 dsDNA binding protein DNA, RNA and nucleotide metabolism -1 5912 6205
YP_009198029.1 NC_028789_p24 hypothetical protein phrog_6682 GP16.7-like replication protein DNA, RNA and nucleotide metabolism -1 17347 17721
YP_009198006.1 NC_028789_p1 hypothetical protein singleton unknown function unknown function -1 258 761
YP_009198030.1 NC_028789_p25 hypothetical protein singleton unknown function unknown function -1 17721 18479
YP_009198024.1 NC_028789_p19 bacteriocin biosynthesis protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 14700 14942
YP_009198011.1 NC_028789_p6 hypothetical protein singleton unknown function unknown function -1 2056 2223
YP_009198014.1 NC_028789_p9 transcriptional regulator phrog_10365 late transcriptional activator transcription regulation -1 4807 5190
YP_009198008.1 NC_028789_p3 hypothetical protein singleton unknown function unknown function -1 982 1326
YP_009198017.1 NC_028789_p12 capsid and scaffold protein phrog_10439 head scaffolding protein head and packaging 1 6493 6792
YP_009198025.1 NC_028789_p20 endolysin phrog_7 endolysin lysis 1 14942 15679
YP_009198010.1 NC_028789_p5 hypothetical protein phrog_8992 unknown function unknown function -1 1500 2084
YP_009198027.1 NC_028789_p22 hypothetical protein phrog_27104 unknown function unknown function -1 16707 16979
YP_009198026.1 NC_028789_p21 DNA packaging ATPase phrog_2150 terminase head and packaging 1 15697 16695
YP_009198012.1 NC_028789_p7 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism -1 2320 4098
YP_009198009.1 NC_028789_p4 hypothetical protein phrog_13823 unknown function unknown function -1 1328 1498
YP_009198028.1 NC_028789_p23 hypothetical protein phrog_26935 unknown function unknown function -1 16995 17159
YP_009198018.1 NC_028789_p13 major capsid protein phrog_2006 major head protein head and packaging 1 6792 8141