Genomic map of Mycobacterium phage Piro94 (NC_028794)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028794
Definition
Mycobacterium phage Piro94, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
52647
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.41
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009198247.1 NC_028794_p33 integrase phrog_1 integrase integration and excision -1 25590 26723
YP_009198268.1 NC_028794_p54 hypothetical protein phrog_2436 unknown function unknown function -1 37153 37305
YP_009198266.1 NC_028794_p52 hypothetical protein phrog_499 unknown function unknown function -1 36295 36477
YP_009198304.1 NC_028794_p90 hypothetical protein phrog_11479 unknown function unknown function -1 49706 50035
YP_009198275.1 NC_028794_p61 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39471 39944
YP_009198305.1 NC_028794_p91 hypothetical protein phrog_3207 unknown function unknown function -1 50037 50324
YP_009198254.1 NC_028794_p40 hypothetical protein phrog_3283 unknown function unknown function -1 29187 29411
YP_009198253.1 NC_028794_p39 hypothetical protein phrog_12687 unknown function unknown function -1 28999 29190
YP_009198234.1 NC_028794_p20 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 14448 14816
YP_009198301.1 NC_028794_p87 hypothetical protein phrog_12399 unknown function unknown function -1 49214 49327
YP_009198219.1 NC_028794_p5 hypothetical protein phrog_226 minor tail protein tail 1 2963 3433
YP_009198261.1 NC_028794_p47 hypothetical protein phrog_690 unknown function unknown function -1 32528 32731
YP_009198257.1 NC_028794_p43 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29935 31722
YP_009198218.1 NC_028794_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2628 2924
YP_009198256.1 NC_028794_p42 hypothetical protein phrog_896 unknown function unknown function -1 29683 29904
YP_009198291.1 NC_028794_p77 hypothetical protein phrog_1178 unknown function unknown function -1 46189 46509
YP_009198278.1 NC_028794_p64 hypothetical protein phrog_397 unknown function unknown function -1 40856 41086
YP_009198263.1 NC_028794_p49 DNA binding protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33535 34062
YP_009198260.1 NC_028794_p46 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32109 32531
YP_009198282.1 NC_028794_p68 hypothetical protein phrog_2731 unknown function unknown function -1 42658 42783
YP_009198262.1 NC_028794_p48 ThyX-like protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32733 33461
YP_009198226.1 NC_028794_p12 terminase phrog_9 terminase large subunit head and packaging 1 7941 9728
YP_009198242.1 NC_028794_p28 minor tail subunit phrog_110 minor tail protein tail 1 20672 22444
YP_009198227.1 NC_028794_p13 portal protein phrog_104 portal protein head and packaging 1 9725 11185
YP_009198276.1 NC_028794_p62 hypothetical protein phrog_2187 unknown function unknown function -1 39910 40026
YP_009198295.1 NC_028794_p81 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47094 47405
YP_009198289.1 NC_028794_p75 hypothetical protein phrog_1173 unknown function unknown function -1 45623 45778
YP_009198292.1 NC_028794_p78 hypothetical protein phrog_1875 unknown function unknown function -1 46506 46739
YP_009198271.1 NC_028794_p57 hypothetical protein phrog_2264 unknown function unknown function -1 38392 38469
YP_009198281.1 NC_028794_p67 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41842 42648
YP_009198274.1 NC_028794_p60 hypothetical protein phrog_1370 unknown function unknown function -1 39311 39445
YP_009198308.1 NC_028794_p94 hypothetical protein phrog_1676 unknown function unknown function -1 51169 51462
YP_009198259.1 NC_028794_p45 hypothetical protein phrog_3812 unknown function unknown function -1 31924 32109
YP_009198307.1 NC_028794_p93 hypothetical protein phrog_1445 unknown function unknown function -1 51056 51139
YP_009198245.1 NC_028794_p31 minor tail subunit phrog_737 minor tail protein tail 1 23234 25318
YP_009198233.1 NC_028794_p19 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 14254 14448
YP_009198222.1 NC_028794_p8 hypothetical protein phrog_1087 unknown function unknown function 1 5048 5206
YP_009198244.1 NC_028794_p30 minor tail subunit phrog_404 minor tail protein tail 1 22904 23233
YP_009198241.1 NC_028794_p27 minor tail subunit phrog_106 minor tail protein tail 1 19659 20675
YP_009198285.1 NC_028794_p71 hypothetical protein phrog_642 unknown function unknown function -1 43239 43466
YP_009198216.1 NC_028794_p2 hypothetical protein phrog_5234 unknown function unknown function 1 1313 2317
YP_009198238.1 NC_028794_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16312 17141
YP_009198283.1 NC_028794_p69 hypothetical protein phrog_520 unknown function unknown function -1 42780 43019
YP_009198265.1 NC_028794_p51 hypothetical protein phrog_2046 unknown function unknown function -1 36095 36298
YP_009198298.1 NC_028794_p84 hypothetical protein phrog_828 unknown function unknown function -1 48300 48506
YP_009198223.1 NC_028794_p9 lysin A phrog_317 endolysin lysis 1 5206 6510
YP_009198240.1 NC_028794_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 17131 19638
YP_009198267.1 NC_028794_p53 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36461 37156
YP_009198249.1 NC_028794_p35 hypothetical protein phrog_549 unknown function unknown function 1 27692 28087
YP_009198230.1 NC_028794_p16 major capsid protein phrog_10 major head protein head and packaging 1 12671 13627
YP_009198258.1 NC_028794_p44 hypothetical protein phrog_4326 unknown function unknown function -1 31730 31924
YP_009198231.1 NC_028794_p17 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 13697 13876
YP_009198224.1 NC_028794_p10 holin phrog_526 holin lysis 1 6507 6944
YP_009198225.1 NC_028794_p11 lysin B phrog_102 endolysin lysis 1 6941 7918
YP_009198237.1 NC_028794_p23 major tail subunit phrog_117 major tail protein tail 1 15608 16198
YP_009198294.1 NC_028794_p80 hypothetical protein phrog_1477 unknown function unknown function -1 46963 47094
YP_009198264.1 NC_028794_p50 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34059 36095
YP_009198217.1 NC_028794_p3 hypothetical protein phrog_3585 immunity protein other 1 2317 2631
YP_009198243.1 NC_028794_p29 minor tail subunit phrog_352 minor tail protein tail 1 22461 22907
YP_009198215.1 NC_028794_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 643 1380
YP_009198220.1 NC_028794_p6 hypothetical protein phrog_1260 minor tail protein tail 1 3519 4484
YP_009198246.1 NC_028794_p32 hypothetical protein phrog_19086 unknown function unknown function 1 25395 25598
YP_009198299.1 NC_028794_p85 hypothetical protein phrog_2223 unknown function unknown function -1 48571 48867
YP_009198273.1 NC_028794_p59 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38929 39333
YP_009198297.1 NC_028794_p83 hypothetical protein phrog_855 unknown function unknown function -1 48160 48303
YP_009198303.1 NC_028794_p89 hypothetical protein phrog_1946 unknown function unknown function -1 49491 49697
YP_009198255.1 NC_028794_p41 hypothetical protein phrog_3771 unknown function unknown function -1 29399 29683
YP_009198228.1 NC_028794_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 11215 12066
YP_009198288.1 NC_028794_p74 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44806 45423
YP_009198239.1 NC_028794_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16312 16716
YP_009198232.1 NC_028794_p18 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 13880 14257
YP_009198252.1 NC_028794_p38 hypothetical protein phrog_2099 unknown function unknown function -1 28736 28999
YP_009198221.1 NC_028794_p7 hypothetical protein phrog_19718 unknown function unknown function 1 4592 4900
YP_009198287.1 NC_028794_p73 hypothetical protein phrog_1562 unknown function unknown function -1 44326 44742
YP_009198270.1 NC_028794_p56 hypothetical protein phrog_474 phosphofructokinase other -1 38075 38395
YP_009198229.1 NC_028794_p15 scaffold protein phrog_233 head scaffolding protein head and packaging 1 12117 12641
YP_009198277.1 NC_028794_p63 hydrolase phrog_789 esterase/lipase other -1 40023 40859
YP_009198300.1 NC_028794_p86 hypothetical protein phrog_586 unknown function unknown function -1 48864 49217
YP_009198235.1 NC_028794_p21 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 14816 15151
YP_009198280.1 NC_028794_p66 hypothetical protein phrog_5101 unknown function unknown function -1 41521 41808
YP_009198236.1 NC_028794_p22 head-to-tail connector protein phrog_123 tail terminator connector 1 15161 15589
YP_009198250.1 NC_028794_p36 Xis phrog_66 excisionase and transcriptional regulator integration and excision -1 28165 28335
YP_009198279.1 NC_028794_p65 HTH DNA binding protein phrog_9069 unknown function unknown function -1 41222 41527
YP_009198248.1 NC_028794_p34 hypothetical protein phrog_733 excisionase integration and excision 1 27208 27645
YP_009198293.1 NC_028794_p79 hypothetical protein phrog_3351 unknown function unknown function -1 46736 46963
YP_009198302.1 NC_028794_p88 hypothetical protein phrog_519 unknown function unknown function -1 49327 49494
YP_009198306.1 NC_028794_p92 hypothetical protein phrog_2554 unknown function unknown function -1 50340 51056
YP_009198269.1 NC_028794_p55 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 37308 38078
YP_009198290.1 NC_028794_p76 hypothetical protein phrog_4569 unknown function unknown function -1 45917 46189
YP_009198284.1 NC_028794_p70 hypothetical protein phrog_666 unknown function unknown function -1 43048 43242
YP_009198251.1 NC_028794_p37 hypothetical protein phrog_383 unknown function unknown function -1 28335 28739
YP_009198286.1 NC_028794_p72 RecB-like recombinase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43514 44329
YP_009198272.1 NC_028794_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38469 39101
YP_009198296.1 NC_028794_p82 hypothetical protein phrog_421 unknown function unknown function -1 47402 48160