| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028796 |
Definition |
Mycobacterium phage Phayonce, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Phayoncevirus. |
DB of origin |
REFSEQ |
Length |
49203 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
66.67 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009198392.1 | NC_028796_p48 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 35619 | 35900 |
| YP_009198400.1 | NC_028796_p56 | hypothetical protein | phrog_26381 | unknown function | unknown function | 1 | 39793 | 40356 |
| YP_009198407.1 | NC_028796_p63 | hypothetical protein | phrog_8005 | unknown function | unknown function | 1 | 42906 | 43139 |
| YP_009198356.1 | NC_028796_p12 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 7972 | 8409 |
| YP_009198383.1 | NC_028796_p39 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 31362 | 31964 |
| YP_009198415.1 | NC_028796_p71 | hypothetical protein | phrog_5120 | unknown function | unknown function | 1 | 46893 | 47105 |
| YP_009198388.1 | NC_028796_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33406 | 33576 |
| YP_009198363.1 | NC_028796_p19 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 17840 | 18733 |
| YP_009198401.1 | NC_028796_p57 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 40353 | 40469 |
| YP_009198382.1 | NC_028796_p38 | hypothetical protein | phrog_20006 | unknown function | unknown function | 1 | 31066 | 31365 |
| YP_009198380.1 | NC_028796_p36 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 29962 | 30771 |
| YP_009198398.1 | NC_028796_p54 | DNA methyltransferase | phrog_116 | DNA methyltransferase | other | 1 | 38025 | 39557 |
| YP_009198397.1 | NC_028796_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37810 | 38028 |
| YP_009198395.1 | NC_028796_p51 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37143 | 37571 |
| YP_009198347.1 | NC_028796_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2097 | 3524 |
| YP_009198393.1 | NC_028796_p49 | hypothetical protein | phrog_204 | unknown function | unknown function | 1 | 35927 | 36265 |
| YP_009198376.1 | NC_028796_p32 | integrase | phrog_1 | integrase | integration and excision | -1 | 27957 | 28847 |
| YP_009198419.1 | NC_028796_p75 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 47994 | 48278 |
| YP_009198420.1 | NC_028796_p76 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48244 | 48636 |
| YP_009198385.1 | NC_028796_p41 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 32536 | 32814 |
| YP_009198379.1 | NC_028796_p35 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 29732 | 29965 |
| YP_009198346.1 | NC_028796_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 401 | 2080 |
| YP_009198404.1 | NC_028796_p60 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 41017 | 41526 |
| YP_009198403.1 | NC_028796_p59 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 40788 | 41024 |
| YP_009198391.1 | NC_028796_p47 | RecT | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 34633 | 35622 |
| YP_009198362.1 | NC_028796_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16079 | 17815 |
| YP_009198360.1 | NC_028796_p16 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10531 | 14337 |
| YP_009198345.1 | NC_028796_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 139 | 432 |
| YP_009198389.1 | NC_028796_p45 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 33576 | 33728 |
| YP_009198378.1 | NC_028796_p34 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 29517 | 29735 |
| YP_009198368.1 | NC_028796_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23074 | 23436 |
| YP_009198350.1 | NC_028796_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5268 | 6224 |
| YP_009198387.1 | NC_028796_p43 | WhiB | phrog_12112 | transcriptional regulator WhiB-like | transcription regulation | 1 | 33062 | 33409 |
| YP_009198359.1 | NC_028796_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9613 | 10200 |
| YP_009198354.1 | NC_028796_p10 | head-to-tail connector | phrog_2322 | head-tail connector protein | connector | 1 | 7308 | 7601 |
| YP_009198348.1 | NC_028796_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3515 | 4858 |
| YP_009198384.1 | NC_028796_p40 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 32024 | 32536 |
| YP_009198364.1 | NC_028796_p20 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 18734 | 21115 |
| YP_009198408.1 | NC_028796_p64 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 43136 | 43282 |
| YP_009198351.1 | NC_028796_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6224 | 6577 |
| YP_009198406.1 | NC_028796_p62 | hypothetical protein | phrog_2045 | unknown function | unknown function | 1 | 41740 | 42756 |
| YP_009198394.1 | NC_028796_p50 | hypothetical protein | phrog_210 | unknown function | unknown function | 1 | 36309 | 37142 |
| YP_009198377.1 | NC_028796_p33 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 28987 | 29388 |
| YP_009198373.1 | NC_028796_p29 | hypothetical protein | phrog_12678 | unknown function | unknown function | 1 | 26266 | 26739 |
| YP_009198417.1 | NC_028796_p73 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 47394 | 47762 |
| YP_009198396.1 | NC_028796_p52 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 37571 | 37813 |
| YP_009198358.1 | NC_028796_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9613 | 10519 |
| YP_009198409.1 | NC_028796_p65 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43286 | 43876 |
| YP_009198361.1 | NC_028796_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14334 | 16079 |
| YP_009198352.1 | NC_028796_p8 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6581 | 6943 |
| YP_009198405.1 | NC_028796_p61 | hypothetical protein | phrog_1495 | unknown function | unknown function | 1 | 41528 | 41740 |
| YP_009198371.1 | NC_028796_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 24625 | 25836 |
| YP_009198399.1 | NC_028796_p55 | hypothetical protein | phrog_21063 | unknown function | unknown function | 1 | 39554 | 39796 |
| YP_009198349.1 | NC_028796_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4861 | 5226 |
| YP_009198386.1 | NC_028796_p42 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 32811 | 33065 |
| YP_009198410.1 | NC_028796_p66 | HTH DNA binding protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 43928 | 44809 |
| YP_009198367.1 | NC_028796_p23 | hypothetical protein | phrog_2269 | unknown function | unknown function | 1 | 22513 | 23016 |
| YP_009198353.1 | NC_028796_p9 | head-to-tail connector complex protein | phrog_6553 | head closure Hc1 | connector | 1 | 6943 | 7293 |
| YP_009198413.1 | NC_028796_p69 | peptidase | phrog_908 | unknown function | unknown function | 1 | 45605 | 46513 |
| YP_009198366.1 | NC_028796_p22 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 21448 | 22485 |
| YP_009198402.1 | NC_028796_p58 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 40466 | 40795 |
| YP_009198365.1 | NC_028796_p21 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 21124 | 21447 |
| YP_009198375.1 | NC_028796_p31 | hypothetical protein | phrog_13315 | unknown function | unknown function | -1 | 27306 | 27923 |
| YP_009198374.1 | NC_028796_p30 | hypothetical protein | phrog_21046 | unknown function | unknown function | 1 | 26736 | 27137 |
| YP_009198355.1 | NC_028796_p11 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7601 | 7975 |
| YP_009198372.1 | NC_028796_p28 | hypothetical protein | phrog_5807 | unknown function | unknown function | 1 | 26051 | 26269 |
| YP_009198357.1 | NC_028796_p13 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 8501 | 9499 |
| YP_009198421.1 | NC_028796_p77 | polynucleotide kinase | phrog_2071 | ATPase | other | 1 | 48633 | 49082 |
| YP_009198416.1 | NC_028796_p72 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 47098 | 47397 |
| YP_009198369.1 | NC_028796_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 23436 | 23615 |
| YP_009198390.1 | NC_028796_p46 | RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 33725 | 34636 |
| YP_009198418.1 | NC_028796_p74 | hypothetical protein | phrog_7285 | unknown function | unknown function | 1 | 47749 | 47997 |
| YP_009198412.1 | NC_028796_p68 | hypothetical protein | phrog_7254 | unknown function | unknown function | 1 | 45327 | 45608 |
| YP_009198370.1 | NC_028796_p26 | lysin A | phrog_1512 | endolysin | lysis | 1 | 23684 | 24628 |
| YP_009198411.1 | NC_028796_p67 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 44806 | 45330 |
| YP_009198381.1 | NC_028796_p37 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 30764 | 31069 |
| YP_009198414.1 | NC_028796_p70 | hypothetical protein | phrog_10505 | unknown function | unknown function | 1 | 46510 | 46692 |