Genomic map of Mycobacterium phage Phayonce (NC_028796)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028796
Definition
Mycobacterium phage Phayonce, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Phayoncevirus.
DB of origin
REFSEQ
Length
49203
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
66.67
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009198392.1 NC_028796_p48 hypothetical protein phrog_4387 unknown function unknown function 1 35619 35900
YP_009198400.1 NC_028796_p56 hypothetical protein phrog_26381 unknown function unknown function 1 39793 40356
YP_009198407.1 NC_028796_p63 hypothetical protein phrog_8005 unknown function unknown function 1 42906 43139
YP_009198356.1 NC_028796_p12 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 7972 8409
YP_009198383.1 NC_028796_p39 hypothetical protein phrog_1797 unknown function unknown function 1 31362 31964
YP_009198415.1 NC_028796_p71 hypothetical protein phrog_5120 unknown function unknown function 1 46893 47105
YP_009198388.1 NC_028796_p44 hypothetical protein singleton unknown function unknown function 1 33406 33576
YP_009198363.1 NC_028796_p19 minor tail protein phrog_732 minor tail protein tail 1 17840 18733
YP_009198401.1 NC_028796_p57 hypothetical protein phrog_2001 unknown function unknown function 1 40353 40469
YP_009198382.1 NC_028796_p38 hypothetical protein phrog_20006 unknown function unknown function 1 31066 31365
YP_009198380.1 NC_028796_p36 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 29962 30771
YP_009198398.1 NC_028796_p54 DNA methyltransferase phrog_116 DNA methyltransferase other 1 38025 39557
YP_009198397.1 NC_028796_p53 hypothetical protein singleton unknown function unknown function 1 37810 38028
YP_009198395.1 NC_028796_p51 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37143 37571
YP_009198347.1 NC_028796_p3 portal protein phrog_113 portal protein head and packaging 1 2097 3524
YP_009198393.1 NC_028796_p49 hypothetical protein phrog_204 unknown function unknown function 1 35927 36265
YP_009198376.1 NC_028796_p32 integrase phrog_1 integrase integration and excision -1 27957 28847
YP_009198419.1 NC_028796_p75 hypothetical protein phrog_2074 unknown function unknown function 1 47994 48278
YP_009198420.1 NC_028796_p76 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48244 48636
YP_009198385.1 NC_028796_p41 hypothetical protein phrog_4981 unknown function unknown function 1 32536 32814
YP_009198379.1 NC_028796_p35 hypothetical protein phrog_1622 unknown function unknown function 1 29732 29965
YP_009198346.1 NC_028796_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 401 2080
YP_009198404.1 NC_028796_p60 hypothetical protein phrog_722 unknown function unknown function 1 41017 41526
YP_009198403.1 NC_028796_p59 hypothetical protein phrog_780 unknown function unknown function 1 40788 41024
YP_009198391.1 NC_028796_p47 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34633 35622
YP_009198362.1 NC_028796_p18 minor tail protein phrog_110 minor tail protein tail 1 16079 17815
YP_009198360.1 NC_028796_p16 tape measure protein phrog_2337 tail length tape measure protein tail 1 10531 14337
YP_009198345.1 NC_028796_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 139 432
YP_009198389.1 NC_028796_p45 hypothetical protein phrog_4702 unknown function unknown function 1 33576 33728
YP_009198378.1 NC_028796_p34 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 29517 29735
YP_009198368.1 NC_028796_p24 hypothetical protein phrog_240 head protein head and packaging 1 23074 23436
YP_009198350.1 NC_028796_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5268 6224
YP_009198387.1 NC_028796_p43 WhiB phrog_12112 transcriptional regulator WhiB-like transcription regulation 1 33062 33409
YP_009198359.1 NC_028796_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9613 10200
YP_009198354.1 NC_028796_p10 head-to-tail connector phrog_2322 head-tail connector protein connector 1 7308 7601
YP_009198348.1 NC_028796_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3515 4858
YP_009198384.1 NC_028796_p40 hypothetical protein phrog_658 unknown function unknown function 1 32024 32536
YP_009198364.1 NC_028796_p20 minor tail protein phrog_3493 minor tail protein tail 1 18734 21115
YP_009198408.1 NC_028796_p64 hypothetical protein phrog_2451 unknown function unknown function 1 43136 43282
YP_009198351.1 NC_028796_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 6224 6577
YP_009198406.1 NC_028796_p62 hypothetical protein phrog_2045 unknown function unknown function 1 41740 42756
YP_009198394.1 NC_028796_p50 hypothetical protein phrog_210 unknown function unknown function 1 36309 37142
YP_009198377.1 NC_028796_p33 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 28987 29388
YP_009198373.1 NC_028796_p29 hypothetical protein phrog_12678 unknown function unknown function 1 26266 26739
YP_009198417.1 NC_028796_p73 hypothetical protein phrog_1186 unknown function unknown function 1 47394 47762
YP_009198396.1 NC_028796_p52 hypothetical protein phrog_6109 unknown function unknown function 1 37571 37813
YP_009198358.1 NC_028796_p14 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9613 10519
YP_009198409.1 NC_028796_p65 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43286 43876
YP_009198361.1 NC_028796_p17 minor tail protein phrog_106 minor tail protein tail 1 14334 16079
YP_009198352.1 NC_028796_p8 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 6581 6943
YP_009198405.1 NC_028796_p61 hypothetical protein phrog_1495 unknown function unknown function 1 41528 41740
YP_009198371.1 NC_028796_p27 lysin B phrog_102 endolysin lysis 1 24625 25836
YP_009198399.1 NC_028796_p55 hypothetical protein phrog_21063 unknown function unknown function 1 39554 39796
YP_009198349.1 NC_028796_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4861 5226
YP_009198386.1 NC_028796_p42 hypothetical protein phrog_5803 unknown function unknown function 1 32811 33065
YP_009198410.1 NC_028796_p66 HTH DNA binding protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 43928 44809
YP_009198367.1 NC_028796_p23 hypothetical protein phrog_2269 unknown function unknown function 1 22513 23016
YP_009198353.1 NC_028796_p9 head-to-tail connector complex protein phrog_6553 head closure Hc1 connector 1 6943 7293
YP_009198413.1 NC_028796_p69 peptidase phrog_908 unknown function unknown function 1 45605 46513
YP_009198366.1 NC_028796_p22 hypothetical protein phrog_416 minor tail protein tail 1 21448 22485
YP_009198402.1 NC_028796_p58 hypothetical protein phrog_2060 DNA methyltransferase other 1 40466 40795
YP_009198365.1 NC_028796_p21 hypothetical protein phrog_2235 minor tail protein tail 1 21124 21447
YP_009198375.1 NC_028796_p31 hypothetical protein phrog_13315 unknown function unknown function -1 27306 27923
YP_009198374.1 NC_028796_p30 hypothetical protein phrog_21046 unknown function unknown function 1 26736 27137
YP_009198355.1 NC_028796_p11 hypothetical protein phrog_2325 minor tail protein tail 1 7601 7975
YP_009198372.1 NC_028796_p28 hypothetical protein phrog_5807 unknown function unknown function 1 26051 26269
YP_009198357.1 NC_028796_p13 major tail subunit phrog_476 major tail protein tail 1 8501 9499
YP_009198421.1 NC_028796_p77 polynucleotide kinase phrog_2071 ATPase other 1 48633 49082
YP_009198416.1 NC_028796_p72 hypothetical protein phrog_6617 unknown function unknown function 1 47098 47397
YP_009198369.1 NC_028796_p25 hypothetical protein phrog_1172 unknown function unknown function 1 23436 23615
YP_009198390.1 NC_028796_p46 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 33725 34636
YP_009198418.1 NC_028796_p74 hypothetical protein phrog_7285 unknown function unknown function 1 47749 47997
YP_009198412.1 NC_028796_p68 hypothetical protein phrog_7254 unknown function unknown function 1 45327 45608
YP_009198370.1 NC_028796_p26 lysin A phrog_1512 endolysin lysis 1 23684 24628
YP_009198411.1 NC_028796_p67 hypothetical protein phrog_3599 unknown function unknown function 1 44806 45330
YP_009198381.1 NC_028796_p37 hypothetical protein phrog_3507 unknown function unknown function 1 30764 31069
YP_009198414.1 NC_028796_p70 hypothetical protein phrog_10505 unknown function unknown function 1 46510 46692