Genomic map of Mycobacterium phage Barriga (NC_028804)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028804
Definition
Mycobacterium phage Barriga, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
52643
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
101
%GC
63.39
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009199053.1 NC_028804_p93 hypothetical protein phrog_28071 unknown function unknown function -1 49588 49719
YP_009198988.1 NC_028804_p28 hypothetical protein phrog_352 minor tail protein tail 1 22792 23238
YP_009199023.1 NC_028804_p63 hypothetical protein phrog_9840 unknown function unknown function -1 39826 39957
YP_009199012.1 NC_028804_p52 excisionase phrog_221 metallo-phosphoesterase other -1 36345 37112
YP_009199061.1 NC_028804_p101 hypothetical protein phrog_15488 unknown function unknown function -1 52187 52576
YP_009199014.1 NC_028804_p54 hypothetical protein phrog_474 phosphofructokinase other -1 37276 37755
YP_009199047.1 NC_028804_p87 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48518 48685
YP_009199059.1 NC_028804_p99 hypothetical protein phrog_2985 unknown function unknown function 1 51695 51850
YP_009199028.1 NC_028804_p68 hypothetical protein phrog_2184 unknown function unknown function -1 41449 41766
YP_009199038.1 NC_028804_p78 hypothetical protein phrog_14169 zinc-finger domain protein other -1 45521 45748
YP_009199049.1 NC_028804_p89 hypothetical protein phrog_9318 unknown function unknown function -1 48804 48974
YP_009199026.1 NC_028804_p66 hypothetical protein phrog_1705 unknown function unknown function -1 41016 41147
YP_009198973.1 NC_028804_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9981 10862
YP_009198976.1 NC_028804_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12529 12765
YP_009199001.1 NC_028804_p41 hypothetical protein phrog_1860 unknown function unknown function -1 31467 31553
YP_009198961.1 NC_028804_p1 hypothetical protein phrog_4649 unknown function unknown function 1 600 752
YP_009199037.1 NC_028804_p77 hypothetical protein phrog_11473 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 45049 45531
YP_009199034.1 NC_028804_p74 hypothetical protein phrog_5947 unknown function unknown function -1 44399 44551
YP_009198995.1 NC_028804_p35 minor tail protein phrog_754 minor tail protein tail 1 27886 28467
YP_009199009.1 NC_028804_p49 hypothetical protein phrog_499 unknown function unknown function -1 35239 35424
YP_009198977.1 NC_028804_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12765 13214
YP_009198967.1 NC_028804_p7 hypothetical protein phrog_1718 tail protein tail 1 3933 4193
YP_009198962.1 NC_028804_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 749 1045
YP_009199008.1 NC_028804_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34751 35242
YP_009198982.1 NC_028804_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15388 16187
YP_009198992.1 NC_028804_p32 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 25797 27275
YP_009199042.1 NC_028804_p82 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47269 47568
YP_009198999.1 NC_028804_p39 hypothetical protein phrog_2387 nucleotide kinase other -1 30914 31303
YP_009198975.1 NC_028804_p15 major capsid protein phrog_10 major head protein head and packaging 1 11443 12450
YP_009199016.1 NC_028804_p56 DNA Primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38119 38634
YP_009198980.1 NC_028804_p20 hypothetical protein phrog_123 tail terminator connector 1 13975 14421
YP_009199040.1 NC_028804_p80 hypothetical protein phrog_1809 unknown function unknown function -1 46059 46454
YP_009199027.1 NC_028804_p67 hypothetical protein phrog_520 unknown function unknown function -1 41159 41452
YP_009199003.1 NC_028804_p43 hypothetical protein phrog_9812 unknown function unknown function -1 31828 32079
YP_009198986.1 NC_028804_p26 hypothetical protein phrog_1543 minor tail protein tail 1 20770 20952
YP_009198964.1 NC_028804_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1643 1873
YP_009199035.1 NC_028804_p75 hypothetical protein phrog_12594 unknown function unknown function -1 44585 44752
YP_009199019.1 NC_028804_p59 hypothetical protein phrog_397 unknown function unknown function -1 38845 38979
YP_009199007.1 NC_028804_p47 hypothetical protein phrog_1781 unknown function unknown function -1 34490 34720
YP_009198993.1 NC_028804_p33 hypothetical protein phrog_644 unknown function unknown function 1 27368 27688
YP_009199015.1 NC_028804_p55 DNA Primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37752 38273
YP_009199054.1 NC_028804_p94 NifU-like protein phrog_8429 NifU-like Fe-S cluster assembly protein moron, auxiliary metabolic gene and host takeover -1 49737 50159
YP_009199043.1 NC_028804_p83 hypothetical protein phrog_7977 unknown function unknown function -1 47561 47830
YP_009199030.1 NC_028804_p70 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 41981 42784
YP_009199044.1 NC_028804_p84 hypothetical protein phrog_1720 unknown function unknown function -1 47864 48133
YP_009199048.1 NC_028804_p88 hypothetical protein phrog_2093 unknown function unknown function -1 48682 48807
YP_009198968.1 NC_028804_p8 hypothetical protein phrog_747 unknown function unknown function 1 4201 4458
YP_009199055.1 NC_028804_p95 tRNA methyltransferase phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover -1 50156 51076
YP_009199005.1 NC_028804_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32501 34327
YP_009198983.1 NC_028804_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15388 15765
YP_009198991.1 NC_028804_p31 minor tail protein phrog_346 minor tail protein tail 1 23951 25804
YP_009199032.1 NC_028804_p72 hypothetical protein phrog_4604 unknown function unknown function -1 43832 44296
YP_009198965.1 NC_028804_p5 hypothetical protein phrog_1197 tail protein tail 1 2138 3208
YP_009199024.1 NC_028804_p64 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 39954 40220
YP_009199006.1 NC_028804_p46 hypothetical protein phrog_542 unknown function unknown function -1 34368 34493
YP_009199056.1 NC_028804_p96 hypothetical protein phrog_14752 unknown function unknown function -1 51073 51225
YP_009198970.1 NC_028804_p10 lysin B phrog_102 endolysin lysis 1 5869 6837
YP_009199051.1 NC_028804_p91 hypothetical protein phrog_4631 unknown function unknown function -1 49139 49456
YP_009198998.1 NC_028804_p38 hypothetical protein phrog_1966 unknown function unknown function -1 30645 30917
YP_009199029.1 NC_028804_p69 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 41763 41954
YP_009199039.1 NC_028804_p79 hypothetical protein phrog_1584 unknown function unknown function -1 45745 46062
YP_009199002.1 NC_028804_p42 hypothetical protein phrog_1971 unknown function unknown function -1 31559 31831
YP_009199000.1 NC_028804_p40 hypothetical protein phrog_2035 unknown function unknown function -1 31300 31470
YP_009198974.1 NC_028804_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10920 11432
YP_009199013.1 NC_028804_p53 hypothetical protein phrog_1503 unknown function unknown function -1 37109 37279
YP_009199017.1 NC_028804_p57 hypothetical protein phrog_1783 unknown function unknown function -1 38613 38777
YP_009199060.1 NC_028804_p100 hypothetical protein phrog_828 unknown function unknown function 1 51933 52139
YP_009198987.1 NC_028804_p27 minor tail protein phrog_110 minor tail protein tail 1 20952 22754
YP_009199045.1 NC_028804_p85 hypothetical protein phrog_1387 unknown function unknown function -1 48130 48333
YP_009199058.1 NC_028804_p98 hypothetical protein phrog_2212 unknown function unknown function -1 51459 51578
YP_009199052.1 NC_028804_p92 hypothetical protein singleton unknown function unknown function -1 49518 49604
YP_009198997.1 NC_028804_p37 integrase phrog_95 integrase integration and excision 1 29037 30524
YP_009198994.1 NC_028804_p34 hypothetical protein phrog_1560 unknown function unknown function 1 27698 27889
YP_009198981.1 NC_028804_p21 major tail protein phrog_117 major tail protein tail 1 14430 15278
YP_009198966.1 NC_028804_p6 hypothetical protein phrog_553 minor tail protein tail 1 3218 3919
YP_009199046.1 NC_028804_p86 hypothetical protein phrog_1155 unknown function unknown function -1 48330 48518
YP_009198985.1 NC_028804_p25 minor tail protein phrog_106 minor tail protein tail 1 18694 20751
YP_009199020.1 NC_028804_p60 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 38976 39467
YP_009199018.1 NC_028804_p58 hypothetical protein phrog_5801 unknown function unknown function -1 38774 38848
YP_009198996.1 NC_028804_p36 hypothetical protein phrog_411 unknown function unknown function 1 28587 28871
YP_009198978.1 NC_028804_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 13214 13576
YP_009199010.1 NC_028804_p50 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35421 36212
YP_009198979.1 NC_028804_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13576 13971
YP_009198984.1 NC_028804_p24 tapemeasure phrog_305 tail length tape measure protein tail 1 16199 18670
YP_009198963.1 NC_028804_p3 hypothetical protein phrog_226 minor tail protein tail 1 1080 1520
YP_009199041.1 NC_028804_p81 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46496 47008
YP_009199004.1 NC_028804_p44 hypothetical protein phrog_383 unknown function unknown function -1 32115 32480
YP_009199050.1 NC_028804_p90 hypothetical protein phrog_932 unknown function unknown function -1 48993 49142
YP_009199021.1 NC_028804_p61 hypothetical protein phrog_1019 unknown function unknown function -1 39454 39540
YP_009198969.1 NC_028804_p9 lysin A phrog_317 endolysin lysis 1 4458 5879
YP_009199022.1 NC_028804_p62 hypothetical protein phrog_2591 unknown function unknown function -1 39578 39826
YP_009199033.1 NC_028804_p73 hypothetical protein phrog_6068 unknown function unknown function -1 44293 44406
YP_009198990.1 NC_028804_p30 hypothetical protein phrog_1397 unknown function unknown function 1 23579 23926
YP_009198971.1 NC_028804_p11 terminase phrog_9 terminase large subunit head and packaging 1 6857 8545
YP_009198989.1 NC_028804_p29 hypothetical protein phrog_981 minor tail protein tail 1 23250 23582
YP_009199057.1 NC_028804_p97 hypothetical protein phrog_2287 unknown function unknown function -1 51222 51434
YP_009199036.1 NC_028804_p76 hypothetical protein phrog_12774 unknown function unknown function -1 44764 45036
YP_009198972.1 NC_028804_p12 portal protein phrog_104 portal protein head and packaging 1 8542 9984
YP_009199025.1 NC_028804_p65 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40220 41029
YP_009199011.1 NC_028804_p51 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36205 36345
YP_009199031.1 NC_028804_p71 hypothetical protein phrog_4285 transposase integration and excision -1 42781 43491