| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028807 |
Definition |
Streptomyces phage SF1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
43150 |
Host Name |
Streptomyces flavovirens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
69.08 |
Number of singletons |
2 |
Number of paralogs |
10 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009199289.1 | NC_028807_p41 | protein of an unannotated phage | phrog_7458 | tail spike protein | tail | 1 | 34953 | 36977 |
| YP_009199263.1 | NC_028807_p15 | protein of an unannotated phage | phrog_22293 | unknown function | unknown function | 1 | 12631 | 12837 |
| YP_009199295.1 | NC_028807_p47 | protein of an unannotated phage | phrog_28759 | unknown function | unknown function | 1 | 40777 | 41046 |
| YP_009199294.1 | NC_028807_p46 | protein of an unannotated phage | phrog_5823 | transcriptional regulator | transcription regulation | 1 | 39475 | 40689 |
| YP_009199257.1 | NC_028807_p9 | protein of an unannotated phage | phrog_387 | neck protein | connector | 1 | 7532 | 7783 |
| YP_009199259.1 | NC_028807_p11 | protein of an unannotated phage | phrog_117 | major tail protein | tail | 1 | 8168 | 8740 |
| YP_009199299.1 | NC_028807_p51 | protein of an unannotated phage | phrog_35981 | unknown function | unknown function | 1 | 42383 | 42481 |
| YP_009199251.1 | NC_028807_p3 | protein of an unannotated phage | phrog_104 | portal protein | head and packaging | 1 | 2376 | 3785 |
| YP_009199272.1 | NC_028807_p24 | protein of an unannotated phage | phrog_1522 | head maturation protease | head and packaging | 1 | 21244 | 22044 |
| YP_009199284.1 | NC_028807_p36 | protein of an unannotated phage | phrog_971 | endolysin | lysis | 1 | 27772 | 31344 |
| YP_009199265.1 | NC_028807_p17 | protein of an unannotated phage | phrog_1887 | tail protein | tail | 1 | 15163 | 16281 |
| YP_009199269.1 | NC_028807_p21 | protein of an unannotated phage | phrog_226 | minor tail protein | tail | 1 | 17716 | 18126 |
| YP_009199268.1 | NC_028807_p20 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 17411 | 17518 |
| YP_009199275.1 | NC_028807_p27 | protein of an unannotated phage | phrog_29 | major head protein | head and packaging | 1 | 23280 | 24326 |
| YP_009199297.1 | NC_028807_p49 | protein of an unannotated phage | phrog_12213 | unknown function | unknown function | 1 | 41234 | 41752 |
| YP_009199249.1 | NC_028807_p1 | protein of an unannotated phage | phrog_83 | terminase small subunit | head and packaging | 1 | 126 | 650 |
| YP_009199293.1 | NC_028807_p45 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 38602 | 39129 |
| YP_009199277.1 | NC_028807_p29 | protein of an unannotated phage | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 24652 | 25095 |
| YP_009199266.1 | NC_028807_p18 | protein of an unannotated phage | phrog_21558 | unknown function | unknown function | 1 | 16281 | 16538 |
| YP_009199279.1 | NC_028807_p31 | protein of an unannotated phage | phrog_387 | neck protein | connector | 1 | 25442 | 25726 |
| YP_009199262.1 | NC_028807_p14 | protein of an unannotated phage | phrog_971 | endolysin | lysis | 1 | 9493 | 12630 |
| YP_009199255.1 | NC_028807_p7 | protein of an unannotated phage | phrog_442 | head-tail adaptor | connector | 1 | 6661 | 7194 |
| YP_009199288.1 | NC_028807_p40 | protein of an unannotated phage | phrog_22620 | unknown function | unknown function | 1 | 34326 | 34943 |
| YP_009199260.1 | NC_028807_p12 | protein of an unannotated phage | phrog_10551 | tail assembly chaperone | tail | 1 | 8843 | 9109 |
| YP_009199256.1 | NC_028807_p8 | protein of an unannotated phage | phrog_501 | head closure Hc1 | connector | 1 | 7191 | 7532 |
| YP_009199287.1 | NC_028807_p39 | protein of an unannotated phage | phrog_25601 | unknown function | unknown function | 1 | 33386 | 34312 |
| YP_009199281.1 | NC_028807_p33 | protein of an unannotated phage | phrog_476 | major tail protein | tail | 1 | 26200 | 26865 |
| YP_009199286.1 | NC_028807_p38 | protein of an unannotated phage | phrog_1887 | tail protein | tail | 1 | 32239 | 33384 |
| YP_009199252.1 | NC_028807_p4 | protein of an unannotated phage | phrog_1522 | head maturation protease | head and packaging | 1 | 3796 | 4842 |
| YP_009199300.1 | NC_028807_p52 | protein of an unannotated phage | phrog_12354 | transcriptional regulator | transcription regulation | 1 | 42474 | 42923 |
| YP_009199253.1 | NC_028807_p5 | protein of an unannotated phage | phrog_4708 | head scaffolding protein | head and packaging | 1 | 4857 | 5480 |
| YP_009199274.1 | NC_028807_p26 | protein of an unannotated phage | phrog_3583 | head decoration | head and packaging | 1 | 22870 | 23265 |
| YP_009199254.1 | NC_028807_p6 | protein of an unannotated phage | phrog_212 | major head protein | head and packaging | 1 | 5535 | 6479 |
| YP_009199276.1 | NC_028807_p28 | protein of an unannotated phage | phrog_6587 | head-tail connector protein | connector | 1 | 24323 | 24646 |
| YP_009199283.1 | NC_028807_p35 | protein of an unannotated phage | phrog_5813 | tail assembly chaperone | tail | 1 | 27337 | 27765 |
| YP_009199298.1 | NC_028807_p50 | protein of an unannotated phage | phrog_32738 | unknown function | unknown function | 1 | 41901 | 42383 |
| YP_009199270.1 | NC_028807_p22 | protein of an unannotated phage | phrog_9 | terminase large subunit | head and packaging | 1 | 18141 | 19799 |
| YP_009199250.1 | NC_028807_p2 | protein of an unannotated phage | phrog_9 | terminase large subunit | head and packaging | 1 | 643 | 2349 |
| YP_009199264.1 | NC_028807_p16 | protein of an unannotated phage | phrog_16363 | unknown function | unknown function | 1 | 12896 | 15148 |
| YP_009199278.1 | NC_028807_p30 | protein of an unannotated phage | phrog_501 | head closure Hc1 | connector | 1 | 25092 | 25445 |
| YP_009199280.1 | NC_028807_p32 | protein of an unannotated phage | phrog_123 | tail terminator | connector | 1 | 25726 | 26127 |
| YP_009199290.1 | NC_028807_p42 | protein of an unannotated phage | phrog_880 | endolysin | lysis | 1 | 37059 | 37886 |
| YP_009199273.1 | NC_028807_p25 | protein of an unannotated phage | phrog_4708 | head scaffolding protein | head and packaging | 1 | 22107 | 22856 |
| YP_009199285.1 | NC_028807_p37 | protein of an unannotated phage | phrog_11649 | tail protein | tail | 1 | 31349 | 32239 |
| YP_009199282.1 | NC_028807_p34 | protein of an unannotated phage | phrog_5010 | tail assembly chaperone | tail | 1 | 26969 | 27292 |
| YP_009199271.1 | NC_028807_p23 | protein of an unannotated phage | phrog_104 | portal protein | head and packaging | 1 | 19824 | 21251 |
| YP_009199258.1 | NC_028807_p10 | protein of an unannotated phage | phrog_123 | tail terminator | connector | 1 | 7783 | 8178 |
| YP_009199261.1 | NC_028807_p13 | protein of an unannotated phage | phrog_5813 | tail assembly chaperone | tail | 1 | 9145 | 9489 |
| YP_009199267.1 | NC_028807_p19 | protein of an unannotated phage | phrog_16452 | unknown function | unknown function | 1 | 16563 | 17216 |
| YP_009199291.1 | NC_028807_p43 | protein of an unannotated phage | phrog_443 | holin | lysis | 1 | 37933 | 38184 |
| YP_009199296.1 | NC_028807_p48 | protein of an unannotated phage | phrog_36104 | unknown function | unknown function | 1 | 41043 | 41237 |
| YP_009199292.1 | NC_028807_p44 | protein of an unannotated phage | phrog_2658 | hol-like chemotaxis | other | 1 | 38228 | 38560 |