Genomic map of Streptomyces phage SF1 (NC_028807)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028807
Definition
Streptomyces phage SF1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
43150
Host Name
Streptomyces flavovirens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
69.08
Number of singletons
2
Number of paralogs
10

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009199289.1 NC_028807_p41 protein of an unannotated phage phrog_7458 tail spike protein tail 1 34953 36977
YP_009199263.1 NC_028807_p15 protein of an unannotated phage phrog_22293 unknown function unknown function 1 12631 12837
YP_009199295.1 NC_028807_p47 protein of an unannotated phage phrog_28759 unknown function unknown function 1 40777 41046
YP_009199294.1 NC_028807_p46 protein of an unannotated phage phrog_5823 transcriptional regulator transcription regulation 1 39475 40689
YP_009199257.1 NC_028807_p9 protein of an unannotated phage phrog_387 neck protein connector 1 7532 7783
YP_009199259.1 NC_028807_p11 protein of an unannotated phage phrog_117 major tail protein tail 1 8168 8740
YP_009199299.1 NC_028807_p51 protein of an unannotated phage phrog_35981 unknown function unknown function 1 42383 42481
YP_009199251.1 NC_028807_p3 protein of an unannotated phage phrog_104 portal protein head and packaging 1 2376 3785
YP_009199272.1 NC_028807_p24 protein of an unannotated phage phrog_1522 head maturation protease head and packaging 1 21244 22044
YP_009199284.1 NC_028807_p36 protein of an unannotated phage phrog_971 endolysin lysis 1 27772 31344
YP_009199265.1 NC_028807_p17 protein of an unannotated phage phrog_1887 tail protein tail 1 15163 16281
YP_009199269.1 NC_028807_p21 protein of an unannotated phage phrog_226 minor tail protein tail 1 17716 18126
YP_009199268.1 NC_028807_p20 protein of an unannotated phage singleton unknown function unknown function -1 17411 17518
YP_009199275.1 NC_028807_p27 protein of an unannotated phage phrog_29 major head protein head and packaging 1 23280 24326
YP_009199297.1 NC_028807_p49 protein of an unannotated phage phrog_12213 unknown function unknown function 1 41234 41752
YP_009199249.1 NC_028807_p1 protein of an unannotated phage phrog_83 terminase small subunit head and packaging 1 126 650
YP_009199293.1 NC_028807_p45 protein of an unannotated phage singleton unknown function unknown function -1 38602 39129
YP_009199277.1 NC_028807_p29 protein of an unannotated phage phrog_137 head-tail adaptor Ad1 connector 1 24652 25095
YP_009199266.1 NC_028807_p18 protein of an unannotated phage phrog_21558 unknown function unknown function 1 16281 16538
YP_009199279.1 NC_028807_p31 protein of an unannotated phage phrog_387 neck protein connector 1 25442 25726
YP_009199262.1 NC_028807_p14 protein of an unannotated phage phrog_971 endolysin lysis 1 9493 12630
YP_009199255.1 NC_028807_p7 protein of an unannotated phage phrog_442 head-tail adaptor connector 1 6661 7194
YP_009199288.1 NC_028807_p40 protein of an unannotated phage phrog_22620 unknown function unknown function 1 34326 34943
YP_009199260.1 NC_028807_p12 protein of an unannotated phage phrog_10551 tail assembly chaperone tail 1 8843 9109
YP_009199256.1 NC_028807_p8 protein of an unannotated phage phrog_501 head closure Hc1 connector 1 7191 7532
YP_009199287.1 NC_028807_p39 protein of an unannotated phage phrog_25601 unknown function unknown function 1 33386 34312
YP_009199281.1 NC_028807_p33 protein of an unannotated phage phrog_476 major tail protein tail 1 26200 26865
YP_009199286.1 NC_028807_p38 protein of an unannotated phage phrog_1887 tail protein tail 1 32239 33384
YP_009199252.1 NC_028807_p4 protein of an unannotated phage phrog_1522 head maturation protease head and packaging 1 3796 4842
YP_009199300.1 NC_028807_p52 protein of an unannotated phage phrog_12354 transcriptional regulator transcription regulation 1 42474 42923
YP_009199253.1 NC_028807_p5 protein of an unannotated phage phrog_4708 head scaffolding protein head and packaging 1 4857 5480
YP_009199274.1 NC_028807_p26 protein of an unannotated phage phrog_3583 head decoration head and packaging 1 22870 23265
YP_009199254.1 NC_028807_p6 protein of an unannotated phage phrog_212 major head protein head and packaging 1 5535 6479
YP_009199276.1 NC_028807_p28 protein of an unannotated phage phrog_6587 head-tail connector protein connector 1 24323 24646
YP_009199283.1 NC_028807_p35 protein of an unannotated phage phrog_5813 tail assembly chaperone tail 1 27337 27765
YP_009199298.1 NC_028807_p50 protein of an unannotated phage phrog_32738 unknown function unknown function 1 41901 42383
YP_009199270.1 NC_028807_p22 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 18141 19799
YP_009199250.1 NC_028807_p2 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 643 2349
YP_009199264.1 NC_028807_p16 protein of an unannotated phage phrog_16363 unknown function unknown function 1 12896 15148
YP_009199278.1 NC_028807_p30 protein of an unannotated phage phrog_501 head closure Hc1 connector 1 25092 25445
YP_009199280.1 NC_028807_p32 protein of an unannotated phage phrog_123 tail terminator connector 1 25726 26127
YP_009199290.1 NC_028807_p42 protein of an unannotated phage phrog_880 endolysin lysis 1 37059 37886
YP_009199273.1 NC_028807_p25 protein of an unannotated phage phrog_4708 head scaffolding protein head and packaging 1 22107 22856
YP_009199285.1 NC_028807_p37 protein of an unannotated phage phrog_11649 tail protein tail 1 31349 32239
YP_009199282.1 NC_028807_p34 protein of an unannotated phage phrog_5010 tail assembly chaperone tail 1 26969 27292
YP_009199271.1 NC_028807_p23 protein of an unannotated phage phrog_104 portal protein head and packaging 1 19824 21251
YP_009199258.1 NC_028807_p10 protein of an unannotated phage phrog_123 tail terminator connector 1 7783 8178
YP_009199261.1 NC_028807_p13 protein of an unannotated phage phrog_5813 tail assembly chaperone tail 1 9145 9489
YP_009199267.1 NC_028807_p19 protein of an unannotated phage phrog_16452 unknown function unknown function 1 16563 17216
YP_009199291.1 NC_028807_p43 protein of an unannotated phage phrog_443 holin lysis 1 37933 38184
YP_009199296.1 NC_028807_p48 protein of an unannotated phage phrog_36104 unknown function unknown function 1 41043 41237
YP_009199292.1 NC_028807_p44 protein of an unannotated phage phrog_2658 hol-like chemotaxis other 1 38228 38560