Genomic map of Escherichia phage SUSP1 (NC_028808)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028808
Definition
Escherichia phage SUSP1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Suspvirus.
DB of origin
REFSEQ
Length
90743
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
139
%GC
39.76
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009199362.1 NC_028808_p62 hypothetical protein phrog_4559 unknown function unknown function 1 35628 35879
YP_009199375.1 NC_028808_p75 lysin phrog_7 endolysin lysis -1 42545 43009
YP_009199411.1 NC_028808_p111 hypothetical protein phrog_120 baseplate wedge subunit tail 1 69982 70401
YP_009199323.1 NC_028808_p23 hypothetical protein phrog_4462 unknown function unknown function 1 15143 15454
YP_009199360.1 NC_028808_p60 hypothetical protein phrog_4725 unknown function unknown function 1 34712 35239
YP_009199359.1 NC_028808_p59 hypothetical protein phrog_4318 unknown function unknown function 1 34173 34514
YP_009199386.1 NC_028808_p86 hypothetical protein singleton unknown function unknown function 1 50751 51050
YP_009199437.1 NC_028808_p137 hypothetical protein phrog_4039 unknown function unknown function 1 88701 89123
YP_009199336.1 NC_028808_p36 hypothetical protein phrog_2267 unknown function unknown function 1 25251 25715
YP_009199427.1 NC_028808_p127 hypothetical protein phrog_4332 unknown function unknown function -1 80822 81202
YP_009199364.1 NC_028808_p64 hypothetical protein phrog_4713 unknown function unknown function -1 38185 38655
YP_009199334.1 NC_028808_p34 hypothetical protein phrog_600 unknown function unknown function 1 24018 24566
YP_009199421.1 NC_028808_p121 hypothetical protein phrog_2993 unknown function unknown function -1 78693 78962
YP_009199355.1 NC_028808_p55 hypothetical protein phrog_9030 unknown function unknown function 1 32597 32845
YP_009199317.1 NC_028808_p17 anaerobic ribonucleotide reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 10867 13008
YP_009199429.1 NC_028808_p129 hypothetical protein phrog_4652 unknown function unknown function -1 82177 82764
YP_009199338.1 NC_028808_p38 o-spanin phrog_4180 unknown function unknown function 1 26081 26278
YP_009199344.1 NC_028808_p44 hypothetical protein phrog_2210 unknown function unknown function 1 27658 27858
YP_009199408.1 NC_028808_p108 hypothetical protein phrog_349 virion structural protein head and packaging 1 68041 68382
YP_009199366.1 NC_028808_p66 hypothetical protein phrog_6279 unknown function unknown function -1 38938 39027
YP_009199326.1 NC_028808_p26 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 16304 17185
YP_009199396.1 NC_028808_p96 hypothetical protein phrog_4146 tail protease other 1 59012 59389
YP_009199415.1 NC_028808_p115 tail fiber protein phrog_2097 tail fiber protein tail 1 73047 74174
YP_009199370.1 NC_028808_p70 hypothetical protein phrog_4109 unknown function unknown function -1 40495 41085
YP_009199368.1 NC_028808_p68 hypothetical protein phrog_4459 unknown function unknown function -1 39512 39733
YP_009199400.1 NC_028808_p100 hypothetical protein phrog_2874 unknown function unknown function 1 61482 61883
YP_009199349.1 NC_028808_p49 hypothetical protein phrog_5089 unknown function unknown function 1 30095 30352
YP_009199410.1 NC_028808_p110 hypothetical protein phrog_11 baseplate spike tail 1 69380 69982
YP_009199420.1 NC_028808_p120 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 78151 78696
YP_009199378.1 NC_028808_p78 hypothetical protein phrog_4034 unknown function unknown function -1 44309 44899
YP_009199417.1 NC_028808_p117 hypothetical protein phrog_402 unknown function unknown function 1 76645 76842
YP_009199389.1 NC_028808_p89 hypothetical protein phrog_2114 unknown function unknown function 1 52369 53103
YP_009199439.1 NC_028808_p139 deoxynucleoside monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 89989 90732
YP_009199316.1 NC_028808_p16 hypothetical protein phrog_4532 unknown function unknown function 1 10617 10817
YP_009199309.1 NC_028808_p9 hypothetical protein phrog_2144 MazG-like pyrophosphatase other 1 5307 6062
YP_009199423.1 NC_028808_p123 hypothetical protein phrog_9143 unknown function unknown function -1 79479 79979
YP_009199413.1 NC_028808_p113 hypothetical protein phrog_4017 baseplate protein tail 1 71873 72730
YP_009199402.1 NC_028808_p102 structural protein phrog_205 tail sheath tail 1 62458 63810
YP_009199385.1 NC_028808_p85 hypothetical protein phrog_2255 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49673 50077
YP_009199391.1 NC_028808_p91 terminase large subunit phrog_979 terminase large subunit head and packaging 1 53725 55326
YP_009199340.1 NC_028808_p40 hypothetical protein phrog_26590 unknown function unknown function 1 26546 26707
YP_009199313.1 NC_028808_p13 hypothetical protein phrog_2652 unknown function unknown function 1 9037 9312
YP_009199381.1 NC_028808_p81 hypothetical protein phrog_4114 unknown function unknown function 1 45518 45889
YP_009199307.1 NC_028808_p7 NAD synthetase phrog_447 NAD synthetase other 1 4593 5093
YP_009199414.1 NC_028808_p114 hypothetical protein phrog_4141 unknown function unknown function 1 72730 73044
YP_009199430.1 NC_028808_p130 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 83214 84314
YP_009199303.1 NC_028808_p3 hypothetical protein phrog_4982 unknown function unknown function 1 2151 2429
YP_009199345.1 NC_028808_p45 hypothetical protein phrog_335 phosphatase other 1 27860 28654
YP_009199310.1 NC_028808_p10 hypothetical protein phrog_4007 unknown function unknown function 1 6043 6366
YP_009199327.1 NC_028808_p27 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 17194 17685
YP_009199361.1 NC_028808_p61 hypothetical protein phrog_7022 unknown function unknown function 1 35301 35564
YP_009199354.1 NC_028808_p54 hypothetical protein phrog_4327 unknown function unknown function 1 32105 32512
YP_009199314.1 NC_028808_p14 ribonucleoside reductase small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 9309 10382
YP_009199365.1 NC_028808_p65 hypothetical protein phrog_4457 unknown function unknown function -1 38698 38934
YP_009199424.1 NC_028808_p124 hypothetical protein phrog_4116 unknown function unknown function -1 79964 80323
YP_009199406.1 NC_028808_p106 tape measure protein phrog_4036 tail length tape measure protein tail 1 65004 67244
YP_009199343.1 NC_028808_p43 hypothetical protein phrog_6082 unknown function unknown function 1 27408 27665
YP_009199367.1 NC_028808_p67 hypothetical protein phrog_4343 unknown function unknown function -1 39009 39515
YP_009199418.1 NC_028808_p118 holin phrog_4038 unknown function unknown function 1 76839 77213
YP_009199407.1 NC_028808_p107 hypothetical protein phrog_3721 unknown function unknown function 1 67244 68041
YP_009199351.1 NC_028808_p51 hypothetical protein phrog_4401 unknown function unknown function 1 31040 31336
YP_009199433.1 NC_028808_p133 hypothetical protein phrog_3474 unknown function unknown function -1 84711 84923
YP_009199426.1 NC_028808_p126 hypothetical protein phrog_4473 unknown function unknown function -1 80617 80820
YP_009199372.1 NC_028808_p72 hypothetical protein phrog_4385 unknown function unknown function -1 41422 41715
YP_009199416.1 NC_028808_p116 tail fiber protein phrog_4277 tail fiber protein tail 1 74217 76565
YP_009199348.1 NC_028808_p48 hypothetical protein phrog_4495 unknown function unknown function 1 29628 30008
YP_009199373.1 NC_028808_p73 hypothetical protein phrog_4348 unknown function unknown function -1 41715 42104
YP_009199352.1 NC_028808_p52 hypothetical protein phrog_4375 unknown function unknown function 1 31330 31677
YP_009199438.1 NC_028808_p138 hypothetical protein phrog_4251 minor tail protein tail 1 89125 89928
YP_009199397.1 NC_028808_p97 major capsid protein phrog_29 major head protein head and packaging 1 59420 60529
YP_009199377.1 NC_028808_p77 hypothetical protein phrog_4463 unknown function unknown function -1 43889 44263
YP_009199308.1 NC_028808_p8 hypothetical protein phrog_4442 unknown function unknown function 1 5080 5307
YP_009199432.1 NC_028808_p132 hypothetical protein phrog_4427 unknown function unknown function -1 84496 84702
YP_009199425.1 NC_028808_p125 transcriptional regulatory protein phrog_1373 transcriptional regulator transcription regulation -1 80325 80624
YP_009199428.1 NC_028808_p128 hypothetical protein phrog_5926 unknown function unknown function -1 81734 82174
YP_009199357.1 NC_028808_p57 hypothetical protein phrog_4640 unknown function unknown function 1 33551 33781
YP_009199383.1 NC_028808_p83 hypothetical protein phrog_38494 unknown function unknown function 1 47837 48007
YP_009199431.1 NC_028808_p131 hypothetical protein phrog_5768 unknown function unknown function -1 84314 84499
YP_009199330.1 NC_028808_p30 hypothetical protein phrog_4262 unknown function unknown function 1 19785 20120
YP_009199324.1 NC_028808_p24 hypothetical protein phrog_3500 unknown function unknown function 1 15507 16022
YP_009199318.1 NC_028808_p18 homing endonuclease phrog_655 homing endonuclease DNA, RNA and nucleotide metabolism 1 13017 13580
YP_009199379.1 NC_028808_p79 hypothetical protein phrog_5064 unknown function unknown function -1 44893 45126
YP_009199392.1 NC_028808_p92 hypothetical protein phrog_113 portal protein head and packaging 1 55344 56810
YP_009199333.1 NC_028808_p33 rIIb phrog_609 RIIB lysis inhibitor lysis 1 22795 23916
YP_009199435.1 NC_028808_p135 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 85206 85733
YP_009199311.1 NC_028808_p11 hypothetical protein phrog_3358 unknown function unknown function 1 6359 6694
YP_009199419.1 NC_028808_p119 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 77253 78149
YP_009199322.1 NC_028808_p22 hypothetical protein phrog_4425 unknown function unknown function 1 14874 15131
YP_009199436.1 NC_028808_p136 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 85744 88443
YP_009199331.1 NC_028808_p31 hypothetical protein phrog_3931 unknown function unknown function 1 20102 20281
YP_009199302.1 NC_028808_p2 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 185 2176
YP_009199393.1 NC_028808_p93 hypothetical protein phrog_3977 unknown function unknown function 1 56810 57310
YP_009199382.1 NC_028808_p82 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 45970 47385
YP_009199390.1 NC_028808_p90 hypothetical protein phrog_4397 unknown function unknown function 1 53503 53703
YP_009199380.1 NC_028808_p80 hypothetical protein phrog_8138 unknown function unknown function -1 45108 45269
YP_009199304.1 NC_028808_p4 hypothetical protein phrog_4424 unknown function unknown function 1 2426 2563
YP_009199347.1 NC_028808_p47 hypothetical protein phrog_14219 unknown function unknown function 1 29378 29539
YP_009199369.1 NC_028808_p69 hypothetical protein phrog_5380 unknown function unknown function -1 39730 40416
YP_009199337.1 NC_028808_p37 i-spanin phrog_1152 Rz-like spanin lysis 1 25768 26115
YP_009199394.1 NC_028808_p94 hypothetical protein phrog_240 head protein head and packaging 1 57310 57642
YP_009199306.1 NC_028808_p6 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 3563 4603
YP_009199434.1 NC_028808_p134 hypothetical protein phrog_4230 unknown function unknown function -1 84942 85154
YP_009199404.1 NC_028808_p104 hypothetical protein phrog_1613 tail assembly chaperone tail 1 64352 64762
YP_009199328.1 NC_028808_p28 nicotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 17702 19519
YP_009199346.1 NC_028808_p46 hypothetical protein phrog_5293 unknown function unknown function 1 29159 29365
YP_009199363.1 NC_028808_p63 hypothetical protein phrog_4330 unknown function unknown function -1 37574 38188
YP_009199398.1 NC_028808_p98 hypothetical protein phrog_1732 unknown function unknown function 1 60551 61003
YP_009199315.1 NC_028808_p15 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 10382 10624
YP_009199374.1 NC_028808_p74 hypothetical protein phrog_4266 unknown function unknown function -1 42097 42495
YP_009199339.1 NC_028808_p39 hypothetical protein phrog_4391 unknown function unknown function 1 26275 26544
YP_009199320.1 NC_028808_p20 anaerobic NTP reductase small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 14132 14617
YP_009199388.1 NC_028808_p88 hypothetical protein phrog_2143 unknown function unknown function 1 51354 51911
YP_009199335.1 NC_028808_p35 polynucleotide kinase phrog_3970 polynucleotide kinase other 1 24544 25239
YP_009199353.1 NC_028808_p53 hypothetical protein phrog_3436 unknown function unknown function 1 31744 32016
YP_009199350.1 NC_028808_p50 hypothetical protein phrog_4190 unknown function unknown function 1 30444 30956
YP_009199399.1 NC_028808_p99 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 61051 61485
YP_009199325.1 NC_028808_p25 hypothetical protein phrog_4726 unknown function unknown function 1 16015 16293
YP_009199412.1 NC_028808_p112 baseplate component phrog_6 baseplate wedge subunit tail 1 70401 71870
YP_009199319.1 NC_028808_p19 hypothetical protein phrog_4382 unknown function unknown function 1 13740 14132
YP_009199409.1 NC_028808_p109 hypothetical protein phrog_196 baseplate hub tail 1 68382 69359
YP_009199401.1 NC_028808_p101 hypothetical protein phrog_4082 unknown function unknown function 1 61858 62457
YP_009199329.1 NC_028808_p29 hypothetical protein phrog_2375 unknown function unknown function 1 19573 19788
YP_009199358.1 NC_028808_p58 hypothetical protein phrog_10118 unknown function unknown function 1 33859 34080
YP_009199301.1 NC_028808_p1 hypothetical protein phrog_4469 unknown function unknown function 1 1 192
YP_009199405.1 NC_028808_p105 hypothetical protein phrog_4963 tail assembly chaperone tail 1 64765 65004
YP_009199376.1 NC_028808_p76 tail protein phrog_3995 tail protein tail -1 43012 43896
YP_009199395.1 NC_028808_p95 head maturation protease phrog_53 head maturation protease head and packaging 1 57653 58999
YP_009199305.1 NC_028808_p5 hypothetical protein phrog_3877 unknown function unknown function 1 2583 3500
YP_009199341.1 NC_028808_p41 hypothetical protein phrog_10881 unknown function unknown function 1 26700 27104
YP_009199342.1 NC_028808_p42 hypothetical protein phrog_4453 unknown function unknown function 1 27107 27433
YP_009199387.1 NC_028808_p87 hypothetical protein phrog_10765 unknown function unknown function 1 51096 51308
YP_009199332.1 NC_028808_p32 rIIa phrog_612 RIIA lysis inhibitor lysis 1 20344 22716
YP_009199384.1 NC_028808_p84 hypothetical protein phrog_21637 unknown function unknown function 1 48722 48895
YP_009199422.1 NC_028808_p122 hypothetical protein phrog_4422 unknown function unknown function -1 78959 79477
YP_009199321.1 NC_028808_p21 hypothetical protein phrog_5082 unknown function unknown function 1 14580 14858
YP_009199312.1 NC_028808_p12 ribonucleoside reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 6747 8981
YP_009199356.1 NC_028808_p56 hypothetical protein phrog_3303 unknown function unknown function 1 32930 33487
YP_009199403.1 NC_028808_p103 hypothetical protein phrog_280 virion structural protein head and packaging 1 63826 64272
YP_009199371.1 NC_028808_p71 hypothetical protein phrog_4040 unknown function unknown function -1 41085 41429