| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028808 |
Definition |
Escherichia phage SUSP1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Suspvirus. |
DB of origin |
REFSEQ |
Length |
90743 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
139 |
%GC |
39.76 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009199362.1 | NC_028808_p62 | hypothetical protein | phrog_4559 | unknown function | unknown function | 1 | 35628 | 35879 |
| YP_009199375.1 | NC_028808_p75 | lysin | phrog_7 | endolysin | lysis | -1 | 42545 | 43009 |
| YP_009199411.1 | NC_028808_p111 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 69982 | 70401 |
| YP_009199323.1 | NC_028808_p23 | hypothetical protein | phrog_4462 | unknown function | unknown function | 1 | 15143 | 15454 |
| YP_009199360.1 | NC_028808_p60 | hypothetical protein | phrog_4725 | unknown function | unknown function | 1 | 34712 | 35239 |
| YP_009199359.1 | NC_028808_p59 | hypothetical protein | phrog_4318 | unknown function | unknown function | 1 | 34173 | 34514 |
| YP_009199386.1 | NC_028808_p86 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50751 | 51050 |
| YP_009199437.1 | NC_028808_p137 | hypothetical protein | phrog_4039 | unknown function | unknown function | 1 | 88701 | 89123 |
| YP_009199336.1 | NC_028808_p36 | hypothetical protein | phrog_2267 | unknown function | unknown function | 1 | 25251 | 25715 |
| YP_009199427.1 | NC_028808_p127 | hypothetical protein | phrog_4332 | unknown function | unknown function | -1 | 80822 | 81202 |
| YP_009199364.1 | NC_028808_p64 | hypothetical protein | phrog_4713 | unknown function | unknown function | -1 | 38185 | 38655 |
| YP_009199334.1 | NC_028808_p34 | hypothetical protein | phrog_600 | unknown function | unknown function | 1 | 24018 | 24566 |
| YP_009199421.1 | NC_028808_p121 | hypothetical protein | phrog_2993 | unknown function | unknown function | -1 | 78693 | 78962 |
| YP_009199355.1 | NC_028808_p55 | hypothetical protein | phrog_9030 | unknown function | unknown function | 1 | 32597 | 32845 |
| YP_009199317.1 | NC_028808_p17 | anaerobic ribonucleotide reductase | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 10867 | 13008 |
| YP_009199429.1 | NC_028808_p129 | hypothetical protein | phrog_4652 | unknown function | unknown function | -1 | 82177 | 82764 |
| YP_009199338.1 | NC_028808_p38 | o-spanin | phrog_4180 | unknown function | unknown function | 1 | 26081 | 26278 |
| YP_009199344.1 | NC_028808_p44 | hypothetical protein | phrog_2210 | unknown function | unknown function | 1 | 27658 | 27858 |
| YP_009199408.1 | NC_028808_p108 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 68041 | 68382 |
| YP_009199366.1 | NC_028808_p66 | hypothetical protein | phrog_6279 | unknown function | unknown function | -1 | 38938 | 39027 |
| YP_009199326.1 | NC_028808_p26 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 16304 | 17185 |
| YP_009199396.1 | NC_028808_p96 | hypothetical protein | phrog_4146 | tail protease | other | 1 | 59012 | 59389 |
| YP_009199415.1 | NC_028808_p115 | tail fiber protein | phrog_2097 | tail fiber protein | tail | 1 | 73047 | 74174 |
| YP_009199370.1 | NC_028808_p70 | hypothetical protein | phrog_4109 | unknown function | unknown function | -1 | 40495 | 41085 |
| YP_009199368.1 | NC_028808_p68 | hypothetical protein | phrog_4459 | unknown function | unknown function | -1 | 39512 | 39733 |
| YP_009199400.1 | NC_028808_p100 | hypothetical protein | phrog_2874 | unknown function | unknown function | 1 | 61482 | 61883 |
| YP_009199349.1 | NC_028808_p49 | hypothetical protein | phrog_5089 | unknown function | unknown function | 1 | 30095 | 30352 |
| YP_009199410.1 | NC_028808_p110 | hypothetical protein | phrog_11 | baseplate spike | tail | 1 | 69380 | 69982 |
| YP_009199420.1 | NC_028808_p120 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 78151 | 78696 |
| YP_009199378.1 | NC_028808_p78 | hypothetical protein | phrog_4034 | unknown function | unknown function | -1 | 44309 | 44899 |
| YP_009199417.1 | NC_028808_p117 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 76645 | 76842 |
| YP_009199389.1 | NC_028808_p89 | hypothetical protein | phrog_2114 | unknown function | unknown function | 1 | 52369 | 53103 |
| YP_009199439.1 | NC_028808_p139 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 89989 | 90732 |
| YP_009199316.1 | NC_028808_p16 | hypothetical protein | phrog_4532 | unknown function | unknown function | 1 | 10617 | 10817 |
| YP_009199309.1 | NC_028808_p9 | hypothetical protein | phrog_2144 | MazG-like pyrophosphatase | other | 1 | 5307 | 6062 |
| YP_009199423.1 | NC_028808_p123 | hypothetical protein | phrog_9143 | unknown function | unknown function | -1 | 79479 | 79979 |
| YP_009199413.1 | NC_028808_p113 | hypothetical protein | phrog_4017 | baseplate protein | tail | 1 | 71873 | 72730 |
| YP_009199402.1 | NC_028808_p102 | structural protein | phrog_205 | tail sheath | tail | 1 | 62458 | 63810 |
| YP_009199385.1 | NC_028808_p85 | hypothetical protein | phrog_2255 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49673 | 50077 |
| YP_009199391.1 | NC_028808_p91 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | 1 | 53725 | 55326 |
| YP_009199340.1 | NC_028808_p40 | hypothetical protein | phrog_26590 | unknown function | unknown function | 1 | 26546 | 26707 |
| YP_009199313.1 | NC_028808_p13 | hypothetical protein | phrog_2652 | unknown function | unknown function | 1 | 9037 | 9312 |
| YP_009199381.1 | NC_028808_p81 | hypothetical protein | phrog_4114 | unknown function | unknown function | 1 | 45518 | 45889 |
| YP_009199307.1 | NC_028808_p7 | NAD synthetase | phrog_447 | NAD synthetase | other | 1 | 4593 | 5093 |
| YP_009199414.1 | NC_028808_p114 | hypothetical protein | phrog_4141 | unknown function | unknown function | 1 | 72730 | 73044 |
| YP_009199430.1 | NC_028808_p130 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 83214 | 84314 |
| YP_009199303.1 | NC_028808_p3 | hypothetical protein | phrog_4982 | unknown function | unknown function | 1 | 2151 | 2429 |
| YP_009199345.1 | NC_028808_p45 | hypothetical protein | phrog_335 | phosphatase | other | 1 | 27860 | 28654 |
| YP_009199310.1 | NC_028808_p10 | hypothetical protein | phrog_4007 | unknown function | unknown function | 1 | 6043 | 6366 |
| YP_009199327.1 | NC_028808_p27 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 17194 | 17685 |
| YP_009199361.1 | NC_028808_p61 | hypothetical protein | phrog_7022 | unknown function | unknown function | 1 | 35301 | 35564 |
| YP_009199354.1 | NC_028808_p54 | hypothetical protein | phrog_4327 | unknown function | unknown function | 1 | 32105 | 32512 |
| YP_009199314.1 | NC_028808_p14 | ribonucleoside reductase small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 9309 | 10382 |
| YP_009199365.1 | NC_028808_p65 | hypothetical protein | phrog_4457 | unknown function | unknown function | -1 | 38698 | 38934 |
| YP_009199424.1 | NC_028808_p124 | hypothetical protein | phrog_4116 | unknown function | unknown function | -1 | 79964 | 80323 |
| YP_009199406.1 | NC_028808_p106 | tape measure protein | phrog_4036 | tail length tape measure protein | tail | 1 | 65004 | 67244 |
| YP_009199343.1 | NC_028808_p43 | hypothetical protein | phrog_6082 | unknown function | unknown function | 1 | 27408 | 27665 |
| YP_009199367.1 | NC_028808_p67 | hypothetical protein | phrog_4343 | unknown function | unknown function | -1 | 39009 | 39515 |
| YP_009199418.1 | NC_028808_p118 | holin | phrog_4038 | unknown function | unknown function | 1 | 76839 | 77213 |
| YP_009199407.1 | NC_028808_p107 | hypothetical protein | phrog_3721 | unknown function | unknown function | 1 | 67244 | 68041 |
| YP_009199351.1 | NC_028808_p51 | hypothetical protein | phrog_4401 | unknown function | unknown function | 1 | 31040 | 31336 |
| YP_009199433.1 | NC_028808_p133 | hypothetical protein | phrog_3474 | unknown function | unknown function | -1 | 84711 | 84923 |
| YP_009199426.1 | NC_028808_p126 | hypothetical protein | phrog_4473 | unknown function | unknown function | -1 | 80617 | 80820 |
| YP_009199372.1 | NC_028808_p72 | hypothetical protein | phrog_4385 | unknown function | unknown function | -1 | 41422 | 41715 |
| YP_009199416.1 | NC_028808_p116 | tail fiber protein | phrog_4277 | tail fiber protein | tail | 1 | 74217 | 76565 |
| YP_009199348.1 | NC_028808_p48 | hypothetical protein | phrog_4495 | unknown function | unknown function | 1 | 29628 | 30008 |
| YP_009199373.1 | NC_028808_p73 | hypothetical protein | phrog_4348 | unknown function | unknown function | -1 | 41715 | 42104 |
| YP_009199352.1 | NC_028808_p52 | hypothetical protein | phrog_4375 | unknown function | unknown function | 1 | 31330 | 31677 |
| YP_009199438.1 | NC_028808_p138 | hypothetical protein | phrog_4251 | minor tail protein | tail | 1 | 89125 | 89928 |
| YP_009199397.1 | NC_028808_p97 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 59420 | 60529 |
| YP_009199377.1 | NC_028808_p77 | hypothetical protein | phrog_4463 | unknown function | unknown function | -1 | 43889 | 44263 |
| YP_009199308.1 | NC_028808_p8 | hypothetical protein | phrog_4442 | unknown function | unknown function | 1 | 5080 | 5307 |
| YP_009199432.1 | NC_028808_p132 | hypothetical protein | phrog_4427 | unknown function | unknown function | -1 | 84496 | 84702 |
| YP_009199425.1 | NC_028808_p125 | transcriptional regulatory protein | phrog_1373 | transcriptional regulator | transcription regulation | -1 | 80325 | 80624 |
| YP_009199428.1 | NC_028808_p128 | hypothetical protein | phrog_5926 | unknown function | unknown function | -1 | 81734 | 82174 |
| YP_009199357.1 | NC_028808_p57 | hypothetical protein | phrog_4640 | unknown function | unknown function | 1 | 33551 | 33781 |
| YP_009199383.1 | NC_028808_p83 | hypothetical protein | phrog_38494 | unknown function | unknown function | 1 | 47837 | 48007 |
| YP_009199431.1 | NC_028808_p131 | hypothetical protein | phrog_5768 | unknown function | unknown function | -1 | 84314 | 84499 |
| YP_009199330.1 | NC_028808_p30 | hypothetical protein | phrog_4262 | unknown function | unknown function | 1 | 19785 | 20120 |
| YP_009199324.1 | NC_028808_p24 | hypothetical protein | phrog_3500 | unknown function | unknown function | 1 | 15507 | 16022 |
| YP_009199318.1 | NC_028808_p18 | homing endonuclease | phrog_655 | homing endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13017 | 13580 |
| YP_009199379.1 | NC_028808_p79 | hypothetical protein | phrog_5064 | unknown function | unknown function | -1 | 44893 | 45126 |
| YP_009199392.1 | NC_028808_p92 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 55344 | 56810 |
| YP_009199333.1 | NC_028808_p33 | rIIb | phrog_609 | RIIB lysis inhibitor | lysis | 1 | 22795 | 23916 |
| YP_009199435.1 | NC_028808_p135 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 85206 | 85733 |
| YP_009199311.1 | NC_028808_p11 | hypothetical protein | phrog_3358 | unknown function | unknown function | 1 | 6359 | 6694 |
| YP_009199419.1 | NC_028808_p119 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 77253 | 78149 |
| YP_009199322.1 | NC_028808_p22 | hypothetical protein | phrog_4425 | unknown function | unknown function | 1 | 14874 | 15131 |
| YP_009199436.1 | NC_028808_p136 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 85744 | 88443 |
| YP_009199331.1 | NC_028808_p31 | hypothetical protein | phrog_3931 | unknown function | unknown function | 1 | 20102 | 20281 |
| YP_009199302.1 | NC_028808_p2 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 185 | 2176 |
| YP_009199393.1 | NC_028808_p93 | hypothetical protein | phrog_3977 | unknown function | unknown function | 1 | 56810 | 57310 |
| YP_009199382.1 | NC_028808_p82 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 45970 | 47385 |
| YP_009199390.1 | NC_028808_p90 | hypothetical protein | phrog_4397 | unknown function | unknown function | 1 | 53503 | 53703 |
| YP_009199380.1 | NC_028808_p80 | hypothetical protein | phrog_8138 | unknown function | unknown function | -1 | 45108 | 45269 |
| YP_009199304.1 | NC_028808_p4 | hypothetical protein | phrog_4424 | unknown function | unknown function | 1 | 2426 | 2563 |
| YP_009199347.1 | NC_028808_p47 | hypothetical protein | phrog_14219 | unknown function | unknown function | 1 | 29378 | 29539 |
| YP_009199369.1 | NC_028808_p69 | hypothetical protein | phrog_5380 | unknown function | unknown function | -1 | 39730 | 40416 |
| YP_009199337.1 | NC_028808_p37 | i-spanin | phrog_1152 | Rz-like spanin | lysis | 1 | 25768 | 26115 |
| YP_009199394.1 | NC_028808_p94 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 57310 | 57642 |
| YP_009199306.1 | NC_028808_p6 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 3563 | 4603 |
| YP_009199434.1 | NC_028808_p134 | hypothetical protein | phrog_4230 | unknown function | unknown function | -1 | 84942 | 85154 |
| YP_009199404.1 | NC_028808_p104 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | 1 | 64352 | 64762 |
| YP_009199328.1 | NC_028808_p28 | nicotinate phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 17702 | 19519 |
| YP_009199346.1 | NC_028808_p46 | hypothetical protein | phrog_5293 | unknown function | unknown function | 1 | 29159 | 29365 |
| YP_009199363.1 | NC_028808_p63 | hypothetical protein | phrog_4330 | unknown function | unknown function | -1 | 37574 | 38188 |
| YP_009199398.1 | NC_028808_p98 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 60551 | 61003 |
| YP_009199315.1 | NC_028808_p15 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 10382 | 10624 |
| YP_009199374.1 | NC_028808_p74 | hypothetical protein | phrog_4266 | unknown function | unknown function | -1 | 42097 | 42495 |
| YP_009199339.1 | NC_028808_p39 | hypothetical protein | phrog_4391 | unknown function | unknown function | 1 | 26275 | 26544 |
| YP_009199320.1 | NC_028808_p20 | anaerobic NTP reductase small subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 14132 | 14617 |
| YP_009199388.1 | NC_028808_p88 | hypothetical protein | phrog_2143 | unknown function | unknown function | 1 | 51354 | 51911 |
| YP_009199335.1 | NC_028808_p35 | polynucleotide kinase | phrog_3970 | polynucleotide kinase | other | 1 | 24544 | 25239 |
| YP_009199353.1 | NC_028808_p53 | hypothetical protein | phrog_3436 | unknown function | unknown function | 1 | 31744 | 32016 |
| YP_009199350.1 | NC_028808_p50 | hypothetical protein | phrog_4190 | unknown function | unknown function | 1 | 30444 | 30956 |
| YP_009199399.1 | NC_028808_p99 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 61051 | 61485 |
| YP_009199325.1 | NC_028808_p25 | hypothetical protein | phrog_4726 | unknown function | unknown function | 1 | 16015 | 16293 |
| YP_009199412.1 | NC_028808_p112 | baseplate component | phrog_6 | baseplate wedge subunit | tail | 1 | 70401 | 71870 |
| YP_009199319.1 | NC_028808_p19 | hypothetical protein | phrog_4382 | unknown function | unknown function | 1 | 13740 | 14132 |
| YP_009199409.1 | NC_028808_p109 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 68382 | 69359 |
| YP_009199401.1 | NC_028808_p101 | hypothetical protein | phrog_4082 | unknown function | unknown function | 1 | 61858 | 62457 |
| YP_009199329.1 | NC_028808_p29 | hypothetical protein | phrog_2375 | unknown function | unknown function | 1 | 19573 | 19788 |
| YP_009199358.1 | NC_028808_p58 | hypothetical protein | phrog_10118 | unknown function | unknown function | 1 | 33859 | 34080 |
| YP_009199301.1 | NC_028808_p1 | hypothetical protein | phrog_4469 | unknown function | unknown function | 1 | 1 | 192 |
| YP_009199405.1 | NC_028808_p105 | hypothetical protein | phrog_4963 | tail assembly chaperone | tail | 1 | 64765 | 65004 |
| YP_009199376.1 | NC_028808_p76 | tail protein | phrog_3995 | tail protein | tail | -1 | 43012 | 43896 |
| YP_009199395.1 | NC_028808_p95 | head maturation protease | phrog_53 | head maturation protease | head and packaging | 1 | 57653 | 58999 |
| YP_009199305.1 | NC_028808_p5 | hypothetical protein | phrog_3877 | unknown function | unknown function | 1 | 2583 | 3500 |
| YP_009199341.1 | NC_028808_p41 | hypothetical protein | phrog_10881 | unknown function | unknown function | 1 | 26700 | 27104 |
| YP_009199342.1 | NC_028808_p42 | hypothetical protein | phrog_4453 | unknown function | unknown function | 1 | 27107 | 27433 |
| YP_009199387.1 | NC_028808_p87 | hypothetical protein | phrog_10765 | unknown function | unknown function | 1 | 51096 | 51308 |
| YP_009199332.1 | NC_028808_p32 | rIIa | phrog_612 | RIIA lysis inhibitor | lysis | 1 | 20344 | 22716 |
| YP_009199384.1 | NC_028808_p84 | hypothetical protein | phrog_21637 | unknown function | unknown function | 1 | 48722 | 48895 |
| YP_009199422.1 | NC_028808_p122 | hypothetical protein | phrog_4422 | unknown function | unknown function | -1 | 78959 | 79477 |
| YP_009199321.1 | NC_028808_p21 | hypothetical protein | phrog_5082 | unknown function | unknown function | 1 | 14580 | 14858 |
| YP_009199312.1 | NC_028808_p12 | ribonucleoside reductase large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 6747 | 8981 |
| YP_009199356.1 | NC_028808_p56 | hypothetical protein | phrog_3303 | unknown function | unknown function | 1 | 32930 | 33487 |
| YP_009199403.1 | NC_028808_p103 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 63826 | 64272 |
| YP_009199371.1 | NC_028808_p71 | hypothetical protein | phrog_4040 | unknown function | unknown function | -1 | 41085 | 41429 |