Genomic map of Proteus phage pPM_01 (NC_028812)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028812
Definition
Proteus phage pPM_01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
58546
Host Name
Proteus mirabilis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
46.86
Number of singletons
16
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009199631.1 NC_028812_p18 hypothetical protein phrog_7734 unknown function unknown function 1 11722 12042
YP_009199649.1 NC_028812_p36 hypothetical protein singleton unknown function unknown function -1 23059 24000
YP_009199650.1 NC_028812_p37 hypothetical protein singleton unknown function unknown function 1 24224 24382
YP_009199616.1 NC_028812_p3 hypothetical protein phrog_7033 unknown function unknown function -1 3602 4180
YP_009199680.1 NC_028812_p67 hypothetical protein phrog_7721 unknown function unknown function -1 56689 57171
YP_009199630.1 NC_028812_p17 hypothetical protein singleton unknown function unknown function 1 11405 11716
YP_009199666.1 NC_028812_p53 hypothetical protein phrog_4858 unknown function unknown function -1 42670 43023
YP_009199672.1 NC_028812_p59 head-to-tail joining protein phrog_75 head-tail adaptor Ad1 connector -1 47861 48136
YP_009199673.1 NC_028812_p60 terminase large subunit phrog_15 terminase large subunit head and packaging -1 48149 50215
YP_009199670.1 NC_028812_p57 prohead protease ClpP phrog_53 head maturation protease head and packaging -1 44944 46221
YP_009199635.1 NC_028812_p22 hypothetical protein phrog_6886 unknown function unknown function 1 13728 14546
YP_009199651.1 NC_028812_p38 hypothetical protein phrog_2448 unknown function unknown function -1 24697 25713
YP_009199667.1 NC_028812_p54 hypothetical protein phrog_38433 unknown function unknown function -1 43023 43370
YP_009199638.1 NC_028812_p25 hypothetical protein phrog_34189 unknown function unknown function 1 15746 16378
YP_009199628.1 NC_028812_p15 hypothetical protein singleton unknown function unknown function 1 10565 10693
YP_009199663.1 NC_028812_p50 structural protein phrog_807 major tail protein with Ig-like domain tail -1 40357 41544
YP_009199671.1 NC_028812_p58 lambda family portal protein phrog_21 portal protein head and packaging -1 46218 47861
YP_009199629.1 NC_028812_p16 hypothetical protein phrog_6647 unknown function unknown function 1 10892 11323
YP_009199633.1 NC_028812_p20 recombinase RdgC phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism 1 12370 13458
YP_009199676.1 NC_028812_p63 VRR-NUC domain-containing protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 52278 52565
YP_009199665.1 NC_028812_p52 hypothetical protein phrog_27 tail completion or Neck1 protein connector -1 42050 42667
YP_009199653.1 NC_028812_p40 hypothetical protein phrog_2448 unknown function unknown function -1 26720 27640
YP_009199624.1 NC_028812_p11 hypothetical protein phrog_22351 unknown function unknown function -1 8604 9173
YP_009199641.1 NC_028812_p28 hypothetical protein phrog_35002 unknown function unknown function 1 17417 17950
YP_009199648.1 NC_028812_p35 hypothetical protein phrog_7226 unknown function unknown function -1 21070 22908
YP_009199642.1 NC_028812_p29 hypothetical protein singleton unknown function unknown function 1 17943 18194
YP_009199614.1 NC_028812_p1 primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 154 1920
YP_009199682.1 NC_028812_p69 hypothetical protein singleton unknown function unknown function -1 57404 57517
YP_009199654.1 NC_028812_p41 tail fiber protein phrog_7049 tail fiber protein tail -1 27640 28383
YP_009199620.1 NC_028812_p7 hypothetical protein phrog_37849 unknown function unknown function -1 6098 6319
YP_009199637.1 NC_028812_p24 hypothetical protein phrog_36634 unknown function unknown function 1 15307 15753
YP_009199659.1 NC_028812_p46 tail assembly protein phrog_1082 tail assembly protein tail -1 33494 35182
YP_009199634.1 NC_028812_p21 hypothetical protein phrog_7200 unknown function unknown function 1 13461 13661
YP_009199677.1 NC_028812_p64 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 52565 54598
YP_009199639.1 NC_028812_p26 DNA methyltransferase phrog_111 DNA methyltransferase other 1 16378 17115
YP_009199621.1 NC_028812_p8 hypothetical protein phrog_1384 Mom-like DNA modification protein other -1 6303 6953
YP_009199657.1 NC_028812_p44 tail assembly protein 1 phrog_1180 tail assembly chaperone tail -1 32409 32645
YP_009199656.1 NC_028812_p43 tail assembly protein phrog_1196 tail assembly chaperone tail -1 32200 32409
YP_009199652.1 NC_028812_p39 hypothetical protein phrog_2448 unknown function unknown function -1 25726 26706
YP_009199625.1 NC_028812_p12 hypothetical protein phrog_18953 tail protein tail -1 9662 9850
YP_009199618.1 NC_028812_p5 hypothetical protein singleton unknown function unknown function -1 4403 5092
YP_009199647.1 NC_028812_p34 lysis protein B phrog_7686 Rz-like spanin lysis -1 20745 21059
YP_009199662.1 NC_028812_p49 hypothetical protein phrog_5260 tail protein tail -1 39766 40218
YP_009199622.1 NC_028812_p9 hypothetical protein phrog_38602 unknown function unknown function -1 6957 7697
YP_009199626.1 NC_028812_p13 hypothetical protein singleton unknown function unknown function -1 9840 10082
YP_009199617.1 NC_028812_p4 hypothetical protein singleton unknown function unknown function -1 4177 4389
YP_009199632.1 NC_028812_p19 hypothetical protein singleton unknown function unknown function 1 12036 12383
YP_009199675.1 NC_028812_p62 SNF2 domain-containing protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 50795 52318
YP_009199645.1 NC_028812_p32 hypothetical protein phrog_1026 Rz-like spanin lysis -1 19776 20030
YP_009199660.1 NC_028812_p47 tape measure protein phrog_2335 tail length tape measure protein tail -1 35188 39525
YP_009199679.1 NC_028812_p66 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 55300 56628
YP_009199615.1 NC_028812_p2 hypothetical protein singleton unknown function unknown function -1 3366 3590
YP_009199683.1 NC_028812_p70 hypothetical protein phrog_7401 unknown function unknown function 1 57524 57808
YP_009199627.1 NC_028812_p14 hypothetical protein singleton unknown function unknown function -1 10094 10420
YP_009199655.1 NC_028812_p42 tail assembly protein phrog_6284 tail protein tail -1 28383 32207
YP_009199661.1 NC_028812_p48 hypothetical protein singleton unknown function unknown function -1 39515 39673
YP_009199658.1 NC_028812_p45 tail assembly protein phrog_778 tail assembly protein tail -1 32658 33473
YP_009199646.1 NC_028812_p33 lysis protein A phrog_873 endolysin head and packaging -1 20030 20734
YP_009199640.1 NC_028812_p27 hypothetical protein singleton unknown function unknown function -1 17142 17267
YP_009199668.1 NC_028812_p55 capsid protein E phrog_29 major head protein head and packaging -1 43434 44501
YP_009199636.1 NC_028812_p23 hypothetical protein phrog_37274 unknown function unknown function 1 14543 15310
YP_009199669.1 NC_028812_p56 decorator protein D phrog_49 head decoration head and packaging -1 44514 44930
YP_009199619.1 NC_028812_p6 hypothetical protein phrog_37646 unknown function unknown function -1 5145 5936
YP_009199623.1 NC_028812_p10 hypothetical protein singleton unknown function unknown function -1 8246 8611
YP_009199664.1 NC_028812_p51 hypothetical protein phrog_5078 tail terminator connector -1 41548 42060
YP_009199681.1 NC_028812_p68 hypothetical protein singleton unknown function unknown function 1 57201 57344
YP_009199674.1 NC_028812_p61 terminase small subunit phrog_141 terminase small subunit head and packaging -1 50208 50792
YP_009199678.1 NC_028812_p65 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 54663 55268
YP_009199643.1 NC_028812_p30 hypothetical protein phrog_30326 unknown function unknown function 1 18196 19065
YP_009199644.1 NC_028812_p31 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 19062 19526