Genomic map of Pseudoalteromonas phage H103 (NC_028819)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028819
Definition
Pseudoalteromonas Phage H103, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
43190
Host Name
Pseudoalteromonas marina
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
41.17
Number of singletons
19
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009200214.1 NC_028819_p28 hypothetical protein phrog_23168 unknown function unknown function -1 17836 18411
YP_009200234.1 NC_028819_p48 hypothetical protein singleton unknown function unknown function 1 27257 27469
YP_009200218.1 NC_028819_p32 hypothetical protein phrog_14264 unknown function unknown function 1 19461 19640
YP_009200193.1 NC_028819_p7 hypothetical protein phrog_3108 unknown function unknown function 1 2718 3227
YP_009200259.1 NC_028819_p73 hypothetical protein singleton unknown function unknown function 1 41142 41324
YP_009200204.1 NC_028819_p18 hypothetical protein singleton unknown function unknown function 1 14434 14571
YP_009200202.1 NC_028819_p16 hypothetical protein phrog_791 unknown function unknown function -1 12899 13471
YP_009200246.1 NC_028819_p60 hypothetical protein phrog_9002 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34900 35439
YP_009200198.1 NC_028819_p12 hypothetical protein phrog_329 minor tail protein tail -1 9221 9631
YP_009200223.1 NC_028819_p37 hypothetical protein singleton unknown function unknown function 1 22208 22360
YP_009200258.1 NC_028819_p72 hypothetical protein phrog_37169 unknown function unknown function 1 40807 41145
YP_009200212.1 NC_028819_p26 hypothetical protein phrog_20960 unknown function unknown function -1 17031 17588
YP_009200253.1 NC_028819_p67 hypothetical protein singleton unknown function unknown function 1 39271 39516
YP_009200199.1 NC_028819_p13 hypothetical protein phrog_396 minor tail protein tail -1 9631 10122
YP_009200228.1 NC_028819_p42 coat protein phrog_760 unknown function unknown function -1 24239 25390
YP_009200191.1 NC_028819_p5 hypothetical protein singleton unknown function unknown function 1 2303 2566
YP_009200207.1 NC_028819_p21 hypothetical protein phrog_5 tail completion or Neck1 protein connector -1 15388 15795
YP_009200252.1 NC_028819_p66 hypothetical protein singleton unknown function unknown function 1 39040 39267
YP_009200208.1 NC_028819_p22 hypothetical protein phrog_797 unknown function unknown function -1 15796 16152
YP_009200233.1 NC_028819_p47 hypothetical protein phrog_32526 unknown function unknown function 1 26890 27255
YP_009200226.1 NC_028819_p40 coat protein phrog_771 virion structural protein head and packaging -1 22732 23766
YP_009200237.1 NC_028819_p51 hypothetical protein phrog_24333 DNA methyltransferase other -1 29344 29946
YP_009200248.1 NC_028819_p62 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 35654 36532
YP_009200236.1 NC_028819_p50 hypothetical protein phrog_309 terminase small subunit head and packaging -1 28892 29263
YP_009200231.1 NC_028819_p45 hypothetical protein phrog_17613 ATPase other -1 25745 26455
YP_009200195.1 NC_028819_p9 hypothetical protein phrog_1544 unknown function unknown function 1 3483 3974
YP_009200201.1 NC_028819_p15 tail length tape-measure protein 1 phrog_1538 tail length tape measure protein tail -1 10599 12896
YP_009200227.1 NC_028819_p41 hypothetical protein phrog_766 head decoration head and packaging -1 23778 24227
YP_009200203.1 NC_028819_p17 hypothetical protein phrog_1407 major tail protein tail -1 13471 13983
YP_009200188.1 NC_028819_p2 hypothetical protein phrog_758 head morphogenesis head and packaging 1 667 1728
YP_009200251.1 NC_028819_p65 hypothetical protein singleton unknown function unknown function 1 38710 38958
YP_009200229.1 NC_028819_p43 hypothetical protein phrog_4004 unknown function unknown function -1 25434 25592
YP_009200219.1 NC_028819_p33 hypothetical protein phrog_16509 unknown function unknown function -1 19671 20915
YP_009200242.1 NC_028819_p56 hypothetical protein phrog_2201 unknown function unknown function -1 30736 31002
YP_009200250.1 NC_028819_p64 hypothetical protein phrog_824 unknown function unknown function 1 38321 38728
YP_009200230.1 NC_028819_p44 hypothetical protein phrog_20358 unknown function unknown function -1 25576 25758
YP_009200205.1 NC_028819_p19 hypothetical protein singleton unknown function unknown function 1 14631 14954
YP_009200192.1 NC_028819_p6 hypothetical protein phrog_37909 unknown function unknown function 1 2566 2718
YP_009200215.1 NC_028819_p29 hypothetical protein phrog_444 unknown function unknown function -1 18412 18744
YP_009200206.1 NC_028819_p20 hypothetical protein phrog_782 unknown function unknown function -1 14951 15391
YP_009200249.1 NC_028819_p63 ATP-dependent RNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 36532 38331
YP_009200254.1 NC_028819_p68 hypothetical protein phrog_35941 unknown function unknown function 1 39520 39738
YP_009200190.1 NC_028819_p4 hypothetical protein phrog_38632 unknown function unknown function 1 2122 2310
YP_009200196.1 NC_028819_p10 tail fibers protein singleton unknown function unknown function -1 4118 6718
YP_009200240.1 NC_028819_p54 hypothetical protein singleton unknown function unknown function -1 30316 30495
YP_009200209.1 NC_028819_p23 hypothetical protein phrog_786 unknown function unknown function -1 16149 16532
YP_009200222.1 NC_028819_p36 hypothetical protein phrog_4770 unknown function unknown function -1 21799 22098
YP_009200224.1 NC_028819_p38 hypothetical protein phrog_38148 unknown function unknown function 1 22335 22529
YP_009200197.1 NC_028819_p11 38 kDa minor structural protein phrog_469 tail protein tail -1 6763 9228
YP_009200255.1 NC_028819_p69 hypothetical protein phrog_5434 unknown function unknown function 1 39731 40192
YP_009200194.1 NC_028819_p8 hypothetical protein phrog_21897 unknown function unknown function 1 3224 3406
YP_009200261.1 NC_028819_p75 adenine-specific DNA methyltransferase phrog_67 DNA methyltransferase other 1 41632 42321
YP_009200187.1 NC_028819_p1 portal protein singleton unknown function unknown function 1 81 686
YP_009200225.1 NC_028819_p39 hypothetical protein singleton unknown function unknown function -1 22554 22721
YP_009200213.1 NC_028819_p27 hypothetical protein phrog_924 unknown function unknown function -1 17618 17839
YP_009200217.1 NC_028819_p31 hypothetical protein phrog_1273 unknown function unknown function 1 19207 19461
YP_009200260.1 NC_028819_p74 hypothetical protein phrog_1273 unknown function unknown function 1 41327 41632
YP_009200210.1 NC_028819_p24 hypothetical protein singleton unknown function unknown function -1 16534 16668
YP_009200232.1 NC_028819_p46 hypothetical protein phrog_35724 unknown function unknown function -1 26448 26777
YP_009200243.1 NC_028819_p57 hypothetical protein phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 31508 33793
YP_009200189.1 NC_028819_p3 hypothetical protein phrog_15705 unknown function unknown function -1 1753 2037
YP_009200238.1 NC_028819_p52 hypothetical protein singleton unknown function unknown function -1 29946 30176
YP_009200200.1 NC_028819_p14 hypothetical protein phrog_384 virion structural protein head and packaging -1 10119 10595
YP_009200220.1 NC_028819_p34 hypothetical protein phrog_27783 unknown function unknown function -1 20905 21171
YP_009200221.1 NC_028819_p35 hypothetical protein phrog_6609 unknown function unknown function -1 21168 21797
YP_009200244.1 NC_028819_p58 hypothetical protein phrog_18104 transcriptional regulator transcription regulation -1 33795 33968
YP_009200211.1 NC_028819_p25 hypothetical protein phrog_18364 unknown function unknown function -1 16669 17028
YP_009200256.1 NC_028819_p70 hypothetical protein singleton unknown function unknown function 1 40192 40446
YP_009200235.1 NC_028819_p49 terminase large subunit phrog_2 terminase large subunit head and packaging -1 27466 28899
YP_009200245.1 NC_028819_p59 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34133 34897
YP_009200216.1 NC_028819_p30 hypothetical protein singleton unknown function unknown function 1 18857 19117
YP_009200257.1 NC_028819_p71 hypothetical protein phrog_229 MazG-like pyrophosphatase other 1 40451 40810
YP_009200247.1 NC_028819_p61 hypothetical protein singleton unknown function unknown function 1 35478 35657
YP_009200241.1 NC_028819_p55 hypothetical protein singleton unknown function unknown function -1 30497 30739
YP_009200239.1 NC_028819_p53 hypothetical protein phrog_38213 unknown function unknown function -1 30173 30319