| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028819 |
Definition |
Pseudoalteromonas Phage H103, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
43190 |
Host Name |
Pseudoalteromonas marina |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
41.17 |
Number of singletons |
19 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009200214.1 | NC_028819_p28 | hypothetical protein | phrog_23168 | unknown function | unknown function | -1 | 17836 | 18411 |
| YP_009200234.1 | NC_028819_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27257 | 27469 |
| YP_009200218.1 | NC_028819_p32 | hypothetical protein | phrog_14264 | unknown function | unknown function | 1 | 19461 | 19640 |
| YP_009200193.1 | NC_028819_p7 | hypothetical protein | phrog_3108 | unknown function | unknown function | 1 | 2718 | 3227 |
| YP_009200259.1 | NC_028819_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41142 | 41324 |
| YP_009200204.1 | NC_028819_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14434 | 14571 |
| YP_009200202.1 | NC_028819_p16 | hypothetical protein | phrog_791 | unknown function | unknown function | -1 | 12899 | 13471 |
| YP_009200246.1 | NC_028819_p60 | hypothetical protein | phrog_9002 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 34900 | 35439 |
| YP_009200198.1 | NC_028819_p12 | hypothetical protein | phrog_329 | minor tail protein | tail | -1 | 9221 | 9631 |
| YP_009200223.1 | NC_028819_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22208 | 22360 |
| YP_009200258.1 | NC_028819_p72 | hypothetical protein | phrog_37169 | unknown function | unknown function | 1 | 40807 | 41145 |
| YP_009200212.1 | NC_028819_p26 | hypothetical protein | phrog_20960 | unknown function | unknown function | -1 | 17031 | 17588 |
| YP_009200253.1 | NC_028819_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39271 | 39516 |
| YP_009200199.1 | NC_028819_p13 | hypothetical protein | phrog_396 | minor tail protein | tail | -1 | 9631 | 10122 |
| YP_009200228.1 | NC_028819_p42 | coat protein | phrog_760 | unknown function | unknown function | -1 | 24239 | 25390 |
| YP_009200191.1 | NC_028819_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2303 | 2566 |
| YP_009200207.1 | NC_028819_p21 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | -1 | 15388 | 15795 |
| YP_009200252.1 | NC_028819_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39040 | 39267 |
| YP_009200208.1 | NC_028819_p22 | hypothetical protein | phrog_797 | unknown function | unknown function | -1 | 15796 | 16152 |
| YP_009200233.1 | NC_028819_p47 | hypothetical protein | phrog_32526 | unknown function | unknown function | 1 | 26890 | 27255 |
| YP_009200226.1 | NC_028819_p40 | coat protein | phrog_771 | virion structural protein | head and packaging | -1 | 22732 | 23766 |
| YP_009200237.1 | NC_028819_p51 | hypothetical protein | phrog_24333 | DNA methyltransferase | other | -1 | 29344 | 29946 |
| YP_009200248.1 | NC_028819_p62 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 35654 | 36532 |
| YP_009200236.1 | NC_028819_p50 | hypothetical protein | phrog_309 | terminase small subunit | head and packaging | -1 | 28892 | 29263 |
| YP_009200231.1 | NC_028819_p45 | hypothetical protein | phrog_17613 | ATPase | other | -1 | 25745 | 26455 |
| YP_009200195.1 | NC_028819_p9 | hypothetical protein | phrog_1544 | unknown function | unknown function | 1 | 3483 | 3974 |
| YP_009200201.1 | NC_028819_p15 | tail length tape-measure protein 1 | phrog_1538 | tail length tape measure protein | tail | -1 | 10599 | 12896 |
| YP_009200227.1 | NC_028819_p41 | hypothetical protein | phrog_766 | head decoration | head and packaging | -1 | 23778 | 24227 |
| YP_009200203.1 | NC_028819_p17 | hypothetical protein | phrog_1407 | major tail protein | tail | -1 | 13471 | 13983 |
| YP_009200188.1 | NC_028819_p2 | hypothetical protein | phrog_758 | head morphogenesis | head and packaging | 1 | 667 | 1728 |
| YP_009200251.1 | NC_028819_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38710 | 38958 |
| YP_009200229.1 | NC_028819_p43 | hypothetical protein | phrog_4004 | unknown function | unknown function | -1 | 25434 | 25592 |
| YP_009200219.1 | NC_028819_p33 | hypothetical protein | phrog_16509 | unknown function | unknown function | -1 | 19671 | 20915 |
| YP_009200242.1 | NC_028819_p56 | hypothetical protein | phrog_2201 | unknown function | unknown function | -1 | 30736 | 31002 |
| YP_009200250.1 | NC_028819_p64 | hypothetical protein | phrog_824 | unknown function | unknown function | 1 | 38321 | 38728 |
| YP_009200230.1 | NC_028819_p44 | hypothetical protein | phrog_20358 | unknown function | unknown function | -1 | 25576 | 25758 |
| YP_009200205.1 | NC_028819_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14631 | 14954 |
| YP_009200192.1 | NC_028819_p6 | hypothetical protein | phrog_37909 | unknown function | unknown function | 1 | 2566 | 2718 |
| YP_009200215.1 | NC_028819_p29 | hypothetical protein | phrog_444 | unknown function | unknown function | -1 | 18412 | 18744 |
| YP_009200206.1 | NC_028819_p20 | hypothetical protein | phrog_782 | unknown function | unknown function | -1 | 14951 | 15391 |
| YP_009200249.1 | NC_028819_p63 | ATP-dependent RNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 36532 | 38331 |
| YP_009200254.1 | NC_028819_p68 | hypothetical protein | phrog_35941 | unknown function | unknown function | 1 | 39520 | 39738 |
| YP_009200190.1 | NC_028819_p4 | hypothetical protein | phrog_38632 | unknown function | unknown function | 1 | 2122 | 2310 |
| YP_009200196.1 | NC_028819_p10 | tail fibers protein | singleton | unknown function | unknown function | -1 | 4118 | 6718 |
| YP_009200240.1 | NC_028819_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30316 | 30495 |
| YP_009200209.1 | NC_028819_p23 | hypothetical protein | phrog_786 | unknown function | unknown function | -1 | 16149 | 16532 |
| YP_009200222.1 | NC_028819_p36 | hypothetical protein | phrog_4770 | unknown function | unknown function | -1 | 21799 | 22098 |
| YP_009200224.1 | NC_028819_p38 | hypothetical protein | phrog_38148 | unknown function | unknown function | 1 | 22335 | 22529 |
| YP_009200197.1 | NC_028819_p11 | 38 kDa minor structural protein | phrog_469 | tail protein | tail | -1 | 6763 | 9228 |
| YP_009200255.1 | NC_028819_p69 | hypothetical protein | phrog_5434 | unknown function | unknown function | 1 | 39731 | 40192 |
| YP_009200194.1 | NC_028819_p8 | hypothetical protein | phrog_21897 | unknown function | unknown function | 1 | 3224 | 3406 |
| YP_009200261.1 | NC_028819_p75 | adenine-specific DNA methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 41632 | 42321 |
| YP_009200187.1 | NC_028819_p1 | portal protein | singleton | unknown function | unknown function | 1 | 81 | 686 |
| YP_009200225.1 | NC_028819_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22554 | 22721 |
| YP_009200213.1 | NC_028819_p27 | hypothetical protein | phrog_924 | unknown function | unknown function | -1 | 17618 | 17839 |
| YP_009200217.1 | NC_028819_p31 | hypothetical protein | phrog_1273 | unknown function | unknown function | 1 | 19207 | 19461 |
| YP_009200260.1 | NC_028819_p74 | hypothetical protein | phrog_1273 | unknown function | unknown function | 1 | 41327 | 41632 |
| YP_009200210.1 | NC_028819_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16534 | 16668 |
| YP_009200232.1 | NC_028819_p46 | hypothetical protein | phrog_35724 | unknown function | unknown function | -1 | 26448 | 26777 |
| YP_009200243.1 | NC_028819_p57 | hypothetical protein | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 31508 | 33793 |
| YP_009200189.1 | NC_028819_p3 | hypothetical protein | phrog_15705 | unknown function | unknown function | -1 | 1753 | 2037 |
| YP_009200238.1 | NC_028819_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29946 | 30176 |
| YP_009200200.1 | NC_028819_p14 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | -1 | 10119 | 10595 |
| YP_009200220.1 | NC_028819_p34 | hypothetical protein | phrog_27783 | unknown function | unknown function | -1 | 20905 | 21171 |
| YP_009200221.1 | NC_028819_p35 | hypothetical protein | phrog_6609 | unknown function | unknown function | -1 | 21168 | 21797 |
| YP_009200244.1 | NC_028819_p58 | hypothetical protein | phrog_18104 | transcriptional regulator | transcription regulation | -1 | 33795 | 33968 |
| YP_009200211.1 | NC_028819_p25 | hypothetical protein | phrog_18364 | unknown function | unknown function | -1 | 16669 | 17028 |
| YP_009200256.1 | NC_028819_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40192 | 40446 |
| YP_009200235.1 | NC_028819_p49 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 27466 | 28899 |
| YP_009200245.1 | NC_028819_p59 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 34133 | 34897 |
| YP_009200216.1 | NC_028819_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18857 | 19117 |
| YP_009200257.1 | NC_028819_p71 | hypothetical protein | phrog_229 | MazG-like pyrophosphatase | other | 1 | 40451 | 40810 |
| YP_009200247.1 | NC_028819_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35478 | 35657 |
| YP_009200241.1 | NC_028819_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30497 | 30739 |
| YP_009200239.1 | NC_028819_p53 | hypothetical protein | phrog_38213 | unknown function | unknown function | -1 | 30173 | 30319 |