| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028822 |
Definition |
Escherichia phage P483, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Berlinvirus; Escherichia virus P483. |
DB of origin |
REFSEQ |
Length |
40829 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
45 |
%GC |
48.44 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009200614.1 | NC_028822_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28605 | 28796 |
| YP_009200624.1 | NC_028822_p42 | hypothetical protein | phrog_2193 | unknown function | unknown function | -1 | 37668 | 37823 |
| YP_009200592.1 | NC_028822_p10 | capsid and scaffold protein | phrog_267 | major head protein | head and packaging | -1 | 14074 | 15117 |
| YP_009200597.1 | NC_028822_p15 | hypothetical protein | phrog_1447 | unknown function | unknown function | -1 | 18563 | 18808 |
| YP_009200625.1 | NC_028822_p43 | DNA packaging protein | phrog_38 | terminase large subunit | head and packaging | -1 | 38092 | 39849 |
| YP_009200627.1 | NC_028822_p45 | endopeptidase Rz | phrog_1327 | Rz-like spanin | lysis | -1 | 40425 | 40823 |
| YP_009200593.1 | NC_028822_p11 | capsid and scaffold protein | phrog_1052 | head assembly | head and packaging | -1 | 15285 | 16196 |
| YP_009200608.1 | NC_028822_p26 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26205 | 26651 |
| YP_009200596.1 | NC_028822_p14 | hypothetical protein | phrog_1391 | unknown function | unknown function | -1 | 18272 | 18547 |
| YP_009200620.1 | NC_028822_p38 | protein kinase | phrog_2828 | serine-threonine kinase | other | -1 | 34101 | 35198 |
| YP_009200598.1 | NC_028822_p16 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 18970 | 19884 |
| YP_009200626.1 | NC_028822_p44 | hypothetical protein | phrog_20446 | unknown function | unknown function | -1 | 39865 | 40422 |
| YP_009200616.1 | NC_028822_p34 | dGTP triphosphohydrolase inhibitor | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | -1 | 30217 | 30489 |
| YP_009200615.1 | NC_028822_p33 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 29023 | 30105 |
| YP_009200583.1 | NC_028822_p1 | DNA packaging protein A | phrog_1351 | terminase small subunit | head and packaging | -1 | 364 | 633 |
| YP_009200591.1 | NC_028822_p9 | tail tubular protein A | phrog_446 | tail protein | tail | -1 | 13282 | 13872 |
| YP_009200584.1 | NC_028822_p2 | Phage holin, class II | phrog_920 | holin | lysis | -1 | 626 | 832 |
| YP_009200595.1 | NC_028822_p13 | hypothetical protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | -1 | 17892 | 18257 |
| YP_009200613.1 | NC_028822_p31 | hypothetical protein | phrog_1777 | unknown function | unknown function | -1 | 28163 | 28426 |
| YP_009200618.1 | NC_028822_p36 | hypothetical protein | phrog_8103 | unknown function | unknown function | -1 | 30728 | 31285 |
| YP_009200586.1 | NC_028822_p4 | internal core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | -1 | 2978 | 7450 |
| YP_009200587.1 | NC_028822_p5 | internal core protein | phrog_1339 | internal virion protein | head and packaging | -1 | 7474 | 9753 |
| YP_009200610.1 | NC_028822_p28 | host RNA polymerase inhibitor | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | -1 | 27428 | 27619 |
| YP_009200599.1 | NC_028822_p17 | HNS binding protein | phrog_1334 | unknown function | unknown function | -1 | 19881 | 20090 |
| YP_009200602.1 | NC_028822_p20 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 20638 | 22752 |
| YP_009200609.1 | NC_028822_p27 | ssDNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 26651 | 27358 |
| YP_009200603.1 | NC_028822_p21 | hypothetical protein | phrog_4023 | unknown function | unknown function | -1 | 22765 | 23181 |
| YP_009200589.1 | NC_028822_p7 | internal core protein | phrog_308 | internal virion protein | head and packaging | -1 | 10376 | 10789 |
| YP_009200590.1 | NC_028822_p8 | tail tubular protein B | phrog_457 | tail protein | tail | -1 | 10869 | 13256 |
| YP_009200606.1 | NC_028822_p24 | primase/helicase protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 23873 | 25585 |
| YP_009200619.1 | NC_028822_p37 | DNA-directed RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 31376 | 34027 |
| YP_009200611.1 | NC_028822_p29 | hypothetical protein | phrog_38524 | unknown function | unknown function | -1 | 27707 | 27880 |
| YP_009200623.1 | NC_028822_p41 | S-adenosyl-L-methionine hydrolase | phrog_2226 | SAM-dependent methyltransferase | other | -1 | 35741 | 36199 |
| YP_009200612.1 | NC_028822_p30 | hypothetical protein | phrog_2585 | nucleotide kinase | other | -1 | 27870 | 28163 |
| YP_009200622.1 | NC_028822_p40 | hypothetical protein | phrog_6500 | unknown function | unknown function | -1 | 35467 | 35667 |
| YP_009200594.1 | NC_028822_p12 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | -1 | 16270 | 17877 |
| YP_009200601.1 | NC_028822_p19 | hypothetical protein | phrog_18049 | unknown function | unknown function | -1 | 20397 | 20624 |
| YP_009200585.1 | NC_028822_p3 | tail fibers protein | phrog_4242 | tail fiber protein | tail | -1 | 880 | 2904 |
| YP_009200621.1 | NC_028822_p39 | hypothetical protein | phrog_2385 | unknown function | unknown function | -1 | 35233 | 35433 |
| YP_009200617.1 | NC_028822_p35 | hypothetical protein | phrog_2490 | unknown function | unknown function | -1 | 30489 | 30638 |
| YP_009200607.1 | NC_028822_p25 | N-acetylmuramoyl-L-alanine amidase | phrog_822 | amidase | lysis | -1 | 25753 | 26208 |
| YP_009200600.1 | NC_028822_p18 | HNS binding protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | -1 | 20090 | 20383 |
| YP_009200604.1 | NC_028822_p22 | hypothetical protein | phrog_2254 | unknown function | unknown function | -1 | 23273 | 23575 |
| YP_009200588.1 | NC_028822_p6 | internal core protein | phrog_805 | internal virion protein | head and packaging | -1 | 9768 | 10373 |
| YP_009200605.1 | NC_028822_p23 | hypothetical protein | phrog_1950 | unknown function | unknown function | -1 | 23589 | 23801 |